Literature DB >> 22064913

Diaqua-dichloridobis(pyridine-κN)manganese(II).

M Karthikeyan1, S Karthikeyan, Bala Manimaran.   

Abstract

The molecular title compound, [MnCl(2)(C(5)H(5)N)(2)(H(2)O)(2)], lies about an inversion centre. The Mn(II) atom is in an all-trans octa-hedral environment defined by two water mol-ecules, two chloride anions and two pyridine ligands. An inter-molecular hydrogen-bonding inter-action between a water mol-ecule and a chloride anion bonded to an adjacent Mn(II) atom generates an eight-membered ring. The crystal packing exhibits two inter-molecular π-π stacking inter-actions between the aromatic rings, with centroid-centroid distances of 3.485 (12) and 3.532 (12) Å.

Entities:  

Year:  2011        PMID: 22064913      PMCID: PMC3201495          DOI: 10.1107/S160053681103546X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen-bond motifs, see: Frost et al. (2006 ▶). For related structures, see: Cotton et al. (1995 ▶); Kruszynski et al. (2001 ▶).

Experimental

Crystal data

[MnCl2(C5H5N)2(H2O)2] M = 320.07 Triclinic, a = 6.2290 (5) Å b = 6.6327 (5) Å c = 8.6831 (7) Å α = 108.931 (7)° β = 103.499 (7)° γ = 96.969 (6)° V = 322.30 (4) Å3 Z = 1 Mo Kα radiation μ = 1.43 mm−1 T = 150 K 0.26 × 0.14 × 0.07 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.733, T max = 1.000 1951 measured reflections 1137 independent reflections 1031 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.056 S = 1.05 1137 reflections 87 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681103546X/ng5215sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681103546X/ng5215Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[MnCl2(C5H5N)2(H2O)2]Z = 1
Mr = 320.07F(000) = 163
Triclinic, P1Dx = 1.649 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.2290 (5) ÅCell parameters from 1883 reflections
b = 6.6327 (5) Åθ = 2.6–28.8°
c = 8.6831 (7) ŵ = 1.43 mm1
α = 108.931 (7)°T = 150 K
β = 103.499 (7)°Block, colorless
γ = 96.969 (6)°0.26 × 0.14 × 0.07 mm
V = 322.30 (4) Å3
Oxford Diffraction Xcalibur Eos diffractometer1137 independent reflections
Radiation source: fine-focus sealed tube1031 reflections with I > 2σ(I)
graphiteRint = 0.022
Detector resolution: 15.9821 pixels mm-1θmax = 25.0°, θmin = 2.6°
ω scansh = −7→5
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −7→7
Tmin = 0.733, Tmax = 1.000l = −10→10
1951 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.056H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0294P)2 + 0.1426P] where P = (Fo2 + 2Fc2)/3
1137 reflections(Δ/σ)max = 0.011
87 parametersΔρmax = 0.27 e Å3
2 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H1A0.097 (2)−0.252 (4)0.484 (3)0.038 (7)*
H1B0.237 (5)−0.3957 (19)0.455 (3)0.045 (8)*
Mn10.50000.00000.50000.00900 (13)
Cl10.22317 (7)0.23567 (7)0.43191 (5)0.01375 (13)
N10.4713 (2)−0.1480 (2)0.22133 (17)0.0115 (3)
O10.2181 (2)−0.2694 (2)0.45397 (16)0.0150 (3)
C30.6365 (3)−0.2269 (3)−0.0085 (2)0.0169 (4)
H30.7657−0.2195−0.04440.020*
C20.4261 (3)−0.3200 (3)−0.1260 (2)0.0186 (4)
H20.4112−0.3782−0.24190.022*
C40.6529 (3)−0.1449 (3)0.1626 (2)0.0139 (4)
H40.7956−0.08500.24070.017*
C50.2673 (3)−0.2372 (3)0.1057 (2)0.0147 (4)
H50.1398−0.24010.14400.018*
C10.2383 (3)−0.3246 (3)−0.0671 (2)0.0188 (4)
H10.0943−0.3857−0.14290.023*
U11U22U33U12U13U23
Mn10.0090 (2)0.0087 (2)0.0082 (2)0.00120 (14)0.00223 (14)0.00214 (15)
Cl10.0119 (2)0.0125 (2)0.0175 (2)0.00426 (17)0.00427 (18)0.00570 (18)
N10.0138 (8)0.0098 (7)0.0107 (7)0.0030 (6)0.0030 (6)0.0037 (6)
O10.0135 (7)0.0115 (7)0.0213 (7)0.0018 (5)0.0070 (5)0.0066 (6)
C30.0228 (10)0.0162 (10)0.0186 (9)0.0092 (8)0.0120 (8)0.0092 (8)
C20.0336 (11)0.0135 (9)0.0102 (8)0.0087 (8)0.0064 (8)0.0051 (7)
C40.0144 (9)0.0114 (9)0.0151 (9)0.0038 (7)0.0030 (7)0.0043 (7)
C50.0139 (9)0.0140 (9)0.0154 (9)0.0011 (7)0.0028 (7)0.0060 (7)
C10.0207 (10)0.0148 (10)0.0138 (9)0.0010 (8)−0.0030 (8)0.0031 (8)
Mn1—O1i2.2100 (13)C3—C21.382 (3)
Mn1—O12.2100 (13)C3—C41.381 (2)
Mn1—N12.2505 (14)C3—H30.9300
Mn1—N1i2.2505 (14)C2—C11.383 (3)
Mn1—Cl12.5582 (4)C2—H20.9300
Mn1—Cl1i2.5582 (4)C4—H40.9300
N1—C41.346 (2)C5—C11.379 (3)
N1—C51.345 (2)C5—H50.9300
O1—H1A0.8629 (10)C1—H10.9300
O1—H1B0.8630 (10)
O1i—Mn1—O1180.00 (5)Mn1—O1—H1A124.5 (16)
O1i—Mn1—N192.86 (5)Mn1—O1—H1B123.3 (18)
O1—Mn1—N187.14 (5)H1A—O1—H1B105 (2)
O1i—Mn1—N1i87.14 (5)C2—C3—C4119.36 (17)
O1—Mn1—N1i92.86 (5)C2—C3—H3120.3
N1—Mn1—N1i180.00 (3)C4—C3—H3120.3
O1i—Mn1—Cl188.86 (3)C3—C2—C1118.34 (17)
O1—Mn1—Cl191.14 (3)C3—C2—H2120.8
N1—Mn1—Cl189.26 (4)C1—C2—H2120.8
N1i—Mn1—Cl190.74 (4)N1—C4—C3122.77 (17)
O1i—Mn1—Cl1i91.14 (3)N1—C4—H4118.6
O1—Mn1—Cl1i88.86 (3)C3—C4—H4118.6
N1—Mn1—Cl1i90.74 (4)N1—C5—C1123.08 (17)
N1i—Mn1—Cl1i89.26 (4)N1—C5—H5118.5
Cl1—Mn1—Cl1i180.0C1—C5—H5118.5
C4—N1—C5117.32 (15)C5—C1—C2119.12 (17)
C4—N1—Mn1122.28 (11)C5—C1—H1120.4
C5—N1—Mn1120.36 (12)C2—C1—H1120.4
O1i—Mn1—N1—C435.44 (13)Cl1i—Mn1—N1—C5126.61 (12)
O1—Mn1—N1—C4−144.56 (13)C4—C3—C2—C10.9 (3)
N1i—Mn1—N1—C4174 (7)C5—N1—C4—C30.5 (2)
Cl1—Mn1—N1—C4124.26 (13)Mn1—N1—C4—C3−177.19 (13)
Cl1i—Mn1—N1—C4−55.74 (13)C2—C3—C4—N1−1.2 (3)
O1i—Mn1—N1—C5−142.21 (13)C4—N1—C5—C10.3 (3)
O1—Mn1—N1—C537.79 (13)Mn1—N1—C5—C1178.05 (14)
N1i—Mn1—N1—C5−4(7)N1—C5—C1—C2−0.5 (3)
Cl1—Mn1—N1—C5−53.39 (12)C3—C2—C1—C5−0.2 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1B···Cl1ii0.86 (1)2.38 (1)3.2301 (13)170 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1B⋯Cl1i0.86 (1)2.38 (1)3.2301 (13)170 (2)

Symmetry code: (i) .

  3 in total

1.  Manganese complexes of 1,3,5-triaza-7-phosphaadamantane (PTA): the first nitrogen-bound transition-metal complex of PTA.

Authors:  Brian J Frost; Carolyn M Bautista; Rongcai Huang; Jason Shearer
Journal:  Inorg Chem       Date:  2006-05-01       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
  1 in total

1.  Pseudosymmetric fac-di-aqua-trichlorido[(di-methyl-phosphor-yl)methanaminium-κO]manganese(II).

Authors:  Guido J Reiss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-10
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.