| Literature DB >> 22059058 |
Inna Safyanova, Nikolay M Dudarenko, Vadim A Pavlenko, Turganbay S Iskenderov, Matti Haukka.
Abstract
In the unit cell of the title compound, C(5)H(7)N(3)O, there are two conformers (A and B) which differ in the position of the oxime group with respect to the protonated pyrazole nitro-gen (trans in the A conformer and cis in the B conformer) and in the geometric parameters. The oxime group exists in the nitroso form in both conformers. In the crystal, mol-ecules are linked by inter-molecular N-H⋯O and N-H⋯N hydrogen bonds into zigzag-like chains along the b axis.Entities:
Year: 2011 PMID: 22059058 PMCID: PMC3200577 DOI: 10.1107/S1600536811033794
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H7N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4238 reflections |
| θ = 1.0–27.5° | |
| µ = 0.10 mm−1 | |
| β = 94.613 (3)° | Plate, blue |
| 0.46 × 0.33 × 0.13 mm | |
| Nonius KappaCCD diffractometer | 2747 independent reflections |
| Radiation source: fine-focus sealed tube | 1866 reflections with |
| horizontally mounted graphite crystal | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.4°, θmin = 2.5° |
| φ scans and ω scans with κ offset | |
| Absorption correction: multi-scan ( | |
| 9003 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2747 reflections | (Δ/σ)max < 0.001 |
| 175 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1A | −0.1796 (3) | 0.16615 (7) | 0.22546 (5) | 0.0279 (3) | |
| N1A | 0.3665 (3) | −0.05073 (9) | 0.32527 (7) | 0.0241 (3) | |
| N2A | 0.4403 (3) | 0.02548 (8) | 0.36162 (6) | 0.0243 (3) | |
| N3A | −0.1316 (3) | 0.08489 (8) | 0.22016 (7) | 0.0240 (3) | |
| C1A | 0.2710 (3) | 0.08712 (10) | 0.32773 (8) | 0.0210 (4) | |
| C2A | 0.2872 (4) | 0.17879 (10) | 0.35059 (8) | 0.0258 (4) | |
| H2A | 0.4408 | 0.1837 | 0.3917 | 0.039* | |
| H2B | 0.0648 | 0.1981 | 0.3609 | 0.039* | |
| H2C | 0.3667 | 0.2152 | 0.3144 | 0.039* | |
| C3A | 0.0867 (4) | 0.05016 (9) | 0.26876 (8) | 0.0202 (4) | |
| C4A | 0.1598 (4) | −0.03950 (10) | 0.27044 (8) | 0.0225 (4) | |
| C5A | 0.0466 (4) | −0.11093 (10) | 0.22306 (9) | 0.0308 (4) | |
| H5A | 0.1902 | −0.1133 | 0.1852 | 0.046* | |
| H5B | −0.1839 | −0.1001 | 0.2052 | 0.046* | |
| H5C | 0.0589 | −0.1664 | 0.2476 | 0.046* | |
| O1B | −0.2132 (3) | 0.13230 (7) | −0.04852 (6) | 0.0356 (3) | |
| N1B | 0.3699 (3) | 0.21423 (8) | 0.11942 (7) | 0.0216 (3) | |
| N2B | 0.3158 (3) | 0.30207 (8) | 0.10938 (7) | 0.0226 (3) | |
| N3B | −0.1646 (3) | 0.20960 (9) | −0.03253 (7) | 0.0275 (3) | |
| C1B | 0.1150 (4) | 0.30759 (10) | 0.05258 (8) | 0.0214 (4) | |
| C2B | 0.0044 (4) | 0.39331 (10) | 0.02337 (8) | 0.0267 (4) | |
| H2B1 | 0.0884 | 0.4400 | 0.0540 | 0.040* | |
| H2B2 | −0.2395 | 0.3953 | 0.0182 | 0.040* | |
| H2B3 | 0.0918 | 0.4009 | −0.0213 | 0.040* | |
| C3B | 0.0397 (4) | 0.22318 (10) | 0.02693 (7) | 0.0201 (3) | |
| C4B | 0.2123 (4) | 0.16456 (10) | 0.07173 (8) | 0.0208 (4) | |
| C5B | 0.2411 (4) | 0.06867 (10) | 0.07173 (8) | 0.0264 (4) | |
| H5B1 | 0.3957 | 0.0502 | 0.1100 | 0.040* | |
| H5B2 | 0.3250 | 0.0494 | 0.0288 | 0.040* | |
| H5B3 | 0.0216 | 0.0428 | 0.0763 | 0.040* | |
| H1A | 0.453 (4) | −0.1013 (13) | 0.3437 (9) | 0.040 (5)* | |
| H1B | 0.515 (4) | 0.1949 (11) | 0.1572 (9) | 0.035 (5)* |
| O1A | 0.0312 (6) | 0.0231 (6) | 0.0288 (7) | 0.0049 (5) | −0.0017 (5) | 0.0031 (5) |
| N1A | 0.0283 (7) | 0.0183 (7) | 0.0252 (8) | 0.0026 (6) | −0.0006 (6) | 0.0023 (6) |
| N2A | 0.0268 (7) | 0.0221 (8) | 0.0236 (7) | 0.0000 (6) | 0.0000 (6) | 0.0000 (6) |
| N3A | 0.0240 (7) | 0.0244 (8) | 0.0236 (7) | 0.0010 (6) | 0.0024 (6) | 0.0034 (6) |
| C1A | 0.0187 (8) | 0.0230 (9) | 0.0216 (8) | 0.0002 (6) | 0.0028 (6) | 0.0019 (6) |
| C2A | 0.0259 (8) | 0.0246 (9) | 0.0261 (9) | 0.0004 (7) | −0.0024 (7) | −0.0031 (7) |
| C3A | 0.0198 (8) | 0.0204 (8) | 0.0205 (8) | −0.0002 (6) | 0.0023 (6) | 0.0010 (6) |
| C4A | 0.0224 (8) | 0.0218 (9) | 0.0235 (9) | −0.0005 (7) | 0.0039 (7) | 0.0021 (6) |
| C5A | 0.0352 (9) | 0.0228 (9) | 0.0337 (10) | −0.0011 (7) | −0.0005 (8) | −0.0046 (7) |
| O1B | 0.0459 (7) | 0.0269 (7) | 0.0328 (7) | −0.0057 (6) | −0.0044 (6) | −0.0041 (5) |
| N1B | 0.0249 (7) | 0.0172 (7) | 0.0222 (7) | 0.0014 (6) | −0.0014 (6) | 0.0019 (5) |
| N2B | 0.0270 (7) | 0.0153 (7) | 0.0250 (7) | 0.0008 (5) | −0.0008 (6) | 0.0011 (5) |
| N3B | 0.0295 (7) | 0.0247 (8) | 0.0280 (8) | −0.0038 (6) | 0.0007 (6) | −0.0014 (6) |
| C1B | 0.0220 (8) | 0.0203 (8) | 0.0223 (8) | 0.0005 (6) | 0.0037 (7) | 0.0001 (6) |
| C2B | 0.0308 (9) | 0.0205 (8) | 0.0282 (9) | 0.0013 (7) | −0.0010 (7) | 0.0030 (7) |
| C3B | 0.0212 (8) | 0.0194 (8) | 0.0198 (8) | −0.0005 (6) | 0.0020 (6) | 0.0002 (6) |
| C4B | 0.0204 (8) | 0.0211 (8) | 0.0214 (8) | −0.0018 (6) | 0.0041 (7) | −0.0013 (6) |
| C5B | 0.0313 (9) | 0.0184 (8) | 0.0294 (9) | 0.0012 (7) | 0.0017 (7) | −0.0003 (7) |
| O1A—N3A | 1.2701 (16) | O1B—N3B | 1.2412 (16) |
| N1A—C4A | 1.319 (2) | N1B—C4B | 1.330 (2) |
| N1A—N2A | 1.3922 (18) | N1B—N2B | 1.3801 (17) |
| N1A—H1A | 0.915 (19) | N1B—H1B | 0.954 (18) |
| N2A—C1A | 1.3170 (19) | N2B—C1B | 1.3279 (19) |
| N3A—C3A | 1.3553 (19) | N3B—C3B | 1.3902 (19) |
| C1A—C3A | 1.442 (2) | C1B—C3B | 1.417 (2) |
| C1A—C2A | 1.479 (2) | C1B—C2B | 1.492 (2) |
| C2A—H2A | 0.9800 | C2B—H2B1 | 0.9800 |
| C2A—H2B | 0.9800 | C2B—H2B2 | 0.9800 |
| C2A—H2C | 0.9800 | C2B—H2B3 | 0.9800 |
| C3A—C4A | 1.410 (2) | C3B—C4B | 1.405 (2) |
| C4A—C5A | 1.488 (2) | C4B—C5B | 1.479 (2) |
| C5A—H5A | 0.9800 | C5B—H5B1 | 0.9800 |
| C5A—H5B | 0.9800 | C5B—H5B2 | 0.9800 |
| C5A—H5C | 0.9800 | C5B—H5B3 | 0.9800 |
| C4A—N1A—N2A | 113.82 (13) | C4B—N1B—N2B | 113.61 (12) |
| C4A—N1A—H1A | 129.1 (11) | C4B—N1B—H1B | 126.7 (10) |
| N2A—N1A—H1A | 116.9 (11) | N2B—N1B—H1B | 119.7 (10) |
| C1A—N2A—N1A | 105.42 (12) | C1B—N2B—N1B | 105.14 (12) |
| O1A—N3A—C3A | 115.11 (12) | O1B—N3B—C3B | 115.32 (13) |
| N2A—C1A—C3A | 109.56 (13) | N2B—C1B—C3B | 109.83 (13) |
| N2A—C1A—C2A | 121.60 (13) | N2B—C1B—C2B | 121.54 (13) |
| C3A—C1A—C2A | 128.84 (13) | C3B—C1B—C2B | 128.62 (14) |
| C1A—C2A—H2A | 109.5 | C1B—C2B—H2B1 | 109.5 |
| C1A—C2A—H2B | 109.5 | C1B—C2B—H2B2 | 109.5 |
| H2A—C2A—H2B | 109.5 | H2B1—C2B—H2B2 | 109.5 |
| C1A—C2A—H2C | 109.5 | C1B—C2B—H2B3 | 109.5 |
| H2A—C2A—H2C | 109.5 | H2B1—C2B—H2B3 | 109.5 |
| H2B—C2A—H2C | 109.5 | H2B2—C2B—H2B3 | 109.5 |
| N3A—C3A—C4A | 121.63 (13) | N3B—C3B—C4B | 131.33 (14) |
| N3A—C3A—C1A | 132.39 (14) | N3B—C3B—C1B | 122.16 (14) |
| C4A—C3A—C1A | 105.89 (13) | C4B—C3B—C1B | 106.50 (13) |
| N1A—C4A—C3A | 105.30 (13) | N1B—C4B—C3B | 104.92 (13) |
| N1A—C4A—C5A | 123.80 (14) | N1B—C4B—C5B | 122.65 (14) |
| C3A—C4A—C5A | 130.89 (14) | C3B—C4B—C5B | 132.42 (14) |
| C4A—C5A—H5A | 109.5 | C4B—C5B—H5B1 | 109.5 |
| C4A—C5A—H5B | 109.5 | C4B—C5B—H5B2 | 109.5 |
| H5A—C5A—H5B | 109.5 | H5B1—C5B—H5B2 | 109.5 |
| C4A—C5A—H5C | 109.5 | C4B—C5B—H5B3 | 109.5 |
| H5A—C5A—H5C | 109.5 | H5B1—C5B—H5B3 | 109.5 |
| H5B—C5A—H5C | 109.5 | H5B2—C5B—H5B3 | 109.5 |
| C4A—N1A—N2A—C1A | 0.03 (17) | C4B—N1B—N2B—C1B | −0.10 (17) |
| N1A—N2A—C1A—C3A | −0.15 (16) | N1B—N2B—C1B—C3B | 0.46 (17) |
| N1A—N2A—C1A—C2A | −179.56 (13) | N1B—N2B—C1B—C2B | −178.40 (13) |
| O1A—N3A—C3A—C4A | 178.61 (13) | O1B—N3B—C3B—C4B | 2.4 (2) |
| O1A—N3A—C3A—C1A | 2.4 (2) | O1B—N3B—C3B—C1B | −179.01 (14) |
| N2A—C1A—C3A—N3A | 176.84 (15) | N2B—C1B—C3B—N3B | −179.59 (13) |
| C2A—C1A—C3A—N3A | −3.8 (3) | C2B—C1B—C3B—N3B | −0.8 (2) |
| N2A—C1A—C3A—C4A | 0.22 (16) | N2B—C1B—C3B—C4B | −0.65 (17) |
| C2A—C1A—C3A—C4A | 179.57 (15) | C2B—C1B—C3B—C4B | 178.11 (15) |
| N2A—N1A—C4A—C3A | 0.11 (17) | N2B—N1B—C4B—C3B | −0.30 (16) |
| N2A—N1A—C4A—C5A | 179.38 (14) | N2B—N1B—C4B—C5B | 178.69 (13) |
| N3A—C3A—C4A—N1A | −177.26 (14) | N3B—C3B—C4B—N1B | 179.36 (15) |
| C1A—C3A—C4A—N1A | −0.19 (16) | C1B—C3B—C4B—N1B | 0.56 (16) |
| N3A—C3A—C4A—C5A | 3.5 (3) | N3B—C3B—C4B—C5B | 0.5 (3) |
| C1A—C3A—C4A—C5A | −179.39 (16) | C1B—C3B—C4B—C5B | −178.29 (15) |
| H··· | ||||
| N1B—H1B···O1Ai | 0.954 (18) | 1.802 (18) | 2.7526 (16) | 174.0 (15) |
| N1A—H1A···N2Bii | 0.915 (19) | 1.95 (2) | 2.8544 (18) | 171.5 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1 | 0.954 (18) | 1.802 (18) | 2.7526 (16) | 174.0 (15) |
| N1 | 0.915 (19) | 1.95 (2) | 2.8544 (18) | 171.5 (16) |
Symmetry codes: (i) ; (ii) .