| Literature DB >> 22059042 |
Abstract
In the title mol-ecule, C(11)H(13)ClN(2)O(2), the morpholine ring has a chair conformation. In the crystal, mol-ecules are linked into chains along [100] by N-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 22059042 PMCID: PMC3200746 DOI: 10.1107/S1600536811034611
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H13ClN2O2 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2081 reflections |
| θ = 2.6–27.4° | |
| µ = 0.32 mm−1 | |
| Block, colorless | |
| 0.26 × 0.19 × 0.18 mm |
| Bruker SMART CCD diffractometer | 2081 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 3.0° |
| φ and ω scans | |
| 20865 measured reflections | |
| 2660 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2660 reflections | (Δ/σ)max < 0.001 |
| 149 parameters | Δρmax = 0.40 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.12457 (6) | 0.60377 (5) | 0.44436 (2) | 0.0656 (2) | |
| O1 | 0.41840 (19) | 0.16232 (19) | 0.04233 (6) | 0.0854 (6) | |
| O2 | 0.14298 (12) | 0.24548 (12) | 0.21323 (5) | 0.0505 (3) | |
| N1 | 0.34301 (15) | 0.19345 (14) | 0.16222 (6) | 0.0473 (4) | |
| N2 | 0.35998 (15) | 0.31812 (13) | 0.24422 (6) | 0.0407 (3) | |
| C1 | 0.2740 (3) | 0.1513 (3) | 0.06064 (9) | 0.0782 (7) | |
| H1A | 0.2252 | 0.0940 | 0.0351 | 0.094* | |
| H1B | 0.2264 | 0.2285 | 0.0567 | 0.094* | |
| C2 | 0.2651 (2) | 0.1097 (2) | 0.12415 (8) | 0.0598 (5) | |
| H2B | 0.1657 | 0.1058 | 0.1365 | 0.072* | |
| H2C | 0.3061 | 0.0298 | 0.1277 | 0.072* | |
| C3 | 0.48960 (18) | 0.21365 (17) | 0.14282 (7) | 0.0477 (4) | |
| H3A | 0.5456 | 0.1411 | 0.1489 | 0.057* | |
| H3B | 0.5322 | 0.2777 | 0.1663 | 0.057* | |
| C4 | 0.4918 (2) | 0.2472 (2) | 0.07824 (9) | 0.0695 (6) | |
| H4A | 0.4477 | 0.3257 | 0.0733 | 0.083* | |
| H4B | 0.5903 | 0.2531 | 0.0649 | 0.083* | |
| C5 | 0.27454 (16) | 0.25192 (14) | 0.20668 (7) | 0.0377 (3) | |
| C6 | 0.30274 (16) | 0.38724 (13) | 0.29171 (7) | 0.0370 (3) | |
| C7 | 0.36139 (17) | 0.37550 (15) | 0.34817 (7) | 0.0416 (4) | |
| H7A | 0.4372 | 0.3226 | 0.3545 | 0.050* | |
| C8 | 0.30729 (19) | 0.44249 (15) | 0.39539 (7) | 0.0452 (4) | |
| H8A | 0.3465 | 0.4350 | 0.4333 | 0.054* | |
| C9 | 0.19474 (19) | 0.52025 (14) | 0.38526 (7) | 0.0450 (4) | |
| C10 | 0.13723 (18) | 0.53487 (15) | 0.32897 (8) | 0.0459 (4) | |
| H10A | 0.0626 | 0.5888 | 0.3226 | 0.055* | |
| C11 | 0.19215 (18) | 0.46827 (14) | 0.28228 (7) | 0.0426 (4) | |
| H11A | 0.1546 | 0.4779 | 0.2442 | 0.051* | |
| H1N | 0.445 (2) | 0.2955 (18) | 0.2483 (9) | 0.052 (5)* |
| Cl1 | 0.0811 (4) | 0.0609 (3) | 0.0549 (3) | 0.0125 (2) | 0.0184 (2) | −0.0133 (2) |
| O1 | 0.0807 (11) | 0.1309 (16) | 0.0446 (7) | −0.0306 (11) | 0.0110 (8) | −0.0221 (8) |
| O2 | 0.0341 (6) | 0.0664 (8) | 0.0511 (7) | −0.0016 (5) | 0.0026 (5) | −0.0106 (5) |
| N1 | 0.0405 (7) | 0.0582 (9) | 0.0432 (7) | −0.0077 (6) | 0.0057 (6) | −0.0150 (6) |
| N2 | 0.0347 (7) | 0.0469 (8) | 0.0404 (7) | 0.0043 (6) | 0.0000 (6) | −0.0087 (6) |
| C1 | 0.0687 (14) | 0.115 (2) | 0.0509 (12) | −0.0185 (14) | −0.0091 (11) | −0.0168 (12) |
| C2 | 0.0559 (11) | 0.0712 (13) | 0.0522 (10) | −0.0190 (9) | 0.0065 (9) | −0.0229 (9) |
| C3 | 0.0364 (8) | 0.0592 (10) | 0.0475 (9) | 0.0008 (7) | 0.0050 (7) | −0.0114 (8) |
| C4 | 0.0668 (13) | 0.0873 (16) | 0.0543 (11) | −0.0210 (12) | 0.0089 (11) | −0.0037 (10) |
| C5 | 0.0346 (8) | 0.0410 (8) | 0.0375 (8) | 0.0013 (6) | 0.0002 (6) | 0.0008 (6) |
| C6 | 0.0376 (8) | 0.0342 (8) | 0.0391 (8) | −0.0014 (6) | 0.0045 (6) | −0.0013 (6) |
| C7 | 0.0441 (9) | 0.0378 (8) | 0.0429 (9) | 0.0044 (6) | −0.0011 (7) | −0.0006 (6) |
| C8 | 0.0537 (10) | 0.0437 (9) | 0.0383 (8) | −0.0004 (7) | 0.0031 (7) | 0.0000 (7) |
| C9 | 0.0537 (9) | 0.0356 (8) | 0.0457 (9) | −0.0019 (7) | 0.0134 (8) | −0.0036 (6) |
| C10 | 0.0488 (9) | 0.0354 (8) | 0.0534 (10) | 0.0062 (7) | 0.0072 (8) | 0.0019 (7) |
| C11 | 0.0475 (9) | 0.0380 (8) | 0.0422 (8) | 0.0033 (7) | 0.0007 (7) | 0.0035 (6) |
| Cl1—C9 | 1.7452 (16) | C3—C4 | 1.496 (3) |
| O1—C1 | 1.415 (3) | C3—H3A | 0.9700 |
| O1—C4 | 1.417 (3) | C3—H3B | 0.9700 |
| O2—C5 | 1.2390 (19) | C4—H4A | 0.9700 |
| N1—C5 | 1.351 (2) | C4—H4B | 0.9700 |
| N1—C3 | 1.453 (2) | C6—C7 | 1.385 (2) |
| N1—C2 | 1.457 (2) | C6—C11 | 1.386 (2) |
| N2—C5 | 1.373 (2) | C7—C8 | 1.389 (2) |
| N2—C6 | 1.4175 (19) | C7—H7A | 0.9300 |
| N2—H1N | 0.84 (2) | C8—C9 | 1.379 (2) |
| C1—C2 | 1.499 (3) | C8—H8A | 0.9300 |
| C1—H1A | 0.9700 | C9—C10 | 1.381 (3) |
| C1—H1B | 0.9700 | C10—C11 | 1.381 (2) |
| C2—H2B | 0.9700 | C10—H10A | 0.9300 |
| C2—H2C | 0.9700 | C11—H11A | 0.9300 |
| C1—O1—C4 | 110.71 (16) | O1—C4—H4A | 109.2 |
| C5—N1—C3 | 126.33 (14) | C3—C4—H4A | 109.2 |
| C5—N1—C2 | 120.22 (14) | O1—C4—H4B | 109.2 |
| C3—N1—C2 | 113.14 (13) | C3—C4—H4B | 109.2 |
| C5—N2—C6 | 122.11 (14) | H4A—C4—H4B | 107.9 |
| C5—N2—H1N | 117.2 (13) | O2—C5—N1 | 121.93 (14) |
| C6—N2—H1N | 116.0 (13) | O2—C5—N2 | 122.28 (14) |
| O1—C1—C2 | 110.80 (19) | N1—C5—N2 | 115.78 (13) |
| O1—C1—H1A | 109.5 | C7—C6—C11 | 119.67 (15) |
| C2—C1—H1A | 109.5 | C7—C6—N2 | 119.12 (14) |
| O1—C1—H1B | 109.5 | C11—C6—N2 | 121.19 (14) |
| C2—C1—H1B | 109.5 | C6—C7—C8 | 120.16 (15) |
| H1A—C1—H1B | 108.1 | C6—C7—H7A | 119.9 |
| N1—C2—C1 | 109.42 (17) | C8—C7—H7A | 119.9 |
| N1—C2—H2B | 109.8 | C9—C8—C7 | 119.14 (16) |
| C1—C2—H2B | 109.8 | C9—C8—H8A | 120.4 |
| N1—C2—H2C | 109.8 | C7—C8—H8A | 120.4 |
| C1—C2—H2C | 109.8 | C8—C9—C10 | 121.34 (15) |
| H2B—C2—H2C | 108.2 | C8—C9—Cl1 | 119.59 (14) |
| N1—C3—C4 | 109.94 (15) | C10—C9—Cl1 | 119.06 (14) |
| N1—C3—H3A | 109.7 | C11—C10—C9 | 119.06 (16) |
| C4—C3—H3A | 109.7 | C11—C10—H10A | 120.5 |
| N1—C3—H3B | 109.7 | C9—C10—H10A | 120.5 |
| C4—C3—H3B | 109.7 | C10—C11—C6 | 120.59 (16) |
| H3A—C3—H3B | 108.2 | C10—C11—H11A | 119.7 |
| O1—C4—C3 | 112.21 (18) | C6—C11—H11A | 119.7 |
| C4—O1—C1—C2 | −60.2 (3) | C6—N2—C5—N1 | 177.97 (15) |
| C5—N1—C2—C1 | 120.4 (2) | C5—N2—C6—C7 | 130.52 (17) |
| C3—N1—C2—C1 | −53.6 (2) | C5—N2—C6—C11 | −51.2 (2) |
| O1—C1—C2—N1 | 57.1 (3) | C11—C6—C7—C8 | 1.6 (2) |
| C5—N1—C3—C4 | −121.82 (19) | N2—C6—C7—C8 | 179.86 (15) |
| C2—N1—C3—C4 | 51.7 (2) | C6—C7—C8—C9 | 0.1 (2) |
| C1—O1—C4—C3 | 58.8 (3) | C7—C8—C9—C10 | −1.6 (3) |
| N1—C3—C4—O1 | −53.6 (2) | C7—C8—C9—Cl1 | 179.34 (13) |
| C3—N1—C5—O2 | 166.36 (17) | C8—C9—C10—C11 | 1.3 (3) |
| C2—N1—C5—O2 | −6.8 (3) | Cl1—C9—C10—C11 | −179.61 (13) |
| C3—N1—C5—N2 | −14.0 (2) | C9—C10—C11—C6 | 0.4 (3) |
| C2—N1—C5—N2 | 172.86 (16) | C7—C6—C11—C10 | −1.8 (2) |
| C6—N2—C5—O2 | −2.4 (2) | N2—C6—C11—C10 | 179.88 (15) |
| H··· | ||||
| N2—H1N···O2i | 0.838 (19) | 2.114 (19) | 2.9226 (19) | 162.2 (19) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.838 (19) | 2.114 (19) | 2.9226 (19) | 162.2 (19) |
Symmetry code: (i) .