Literature DB >> 22058899

(2E,4E)-1-(2-Hy-droxy-phen-yl)-5-phenyl-penta-2,4-dien-1-one.

W A Silva, C C Gatto, G R Oliveira.   

Abstract

In the structure of the title chalcone, C(17)H(14)O(2), derived from cinnamaldehyde, the olefine group has a trans configuration. The mol-ecular conformation is stabilized by an intra-molecular O-H⋯O hydrogen-bond inter-action with graph-set motif S(6).

Entities:  

Year:  2011        PMID: 22058899      PMCID: PMC3200610          DOI: 10.1107/S160053681103025X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation, see: Lawrence et al. (2001 ▶). For related structures, see: Patil et al. (2007 ▶); Zhao et al. (2007 ▶). For standard bond lengths, see: Allen (2002 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related activity and structures, see: Dyrager et al. (2011 ▶); Jasinski et al. (2009 ▶); Ruan et al. (2011 ▶); Vencato et al. (2006 ▶).

Experimental

Crystal data

C17H14O2 M = 250.28 Orthorhombic, a = 10.9068 (3) Å b = 7.9851 (2) Å c = 30.2131 (7) Å V = 2631.32 (12) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.39 × 0.17 × 0.09 mm

Data collection

Bruker X8 SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.92, T max = 0.99 18214 measured reflections 2691 independent reflections 1479 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.134 S = 1.01 2691 reflections 174 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.15 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010) ▶. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681103025X/bx2361sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681103025X/bx2361Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681103025X/bx2361Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14O2Dx = 1.264 Mg m3
Mr = 250.28Melting point: 428 K
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
a = 10.9068 (3) ÅCell parameters from 1573 reflections
b = 7.9851 (2) Åθ = 2.7–19.5°
c = 30.2131 (7) ŵ = 0.08 mm1
V = 2631.32 (12) Å3T = 296 K
Z = 8Block, yellow
F(000) = 10560.39 × 0.17 × 0.09 mm
Bruker X8 SMART APEXII diffractometer2691 independent reflections
graphite1479 reflections with I > 2σ(I)
Detector resolution: 8.3333 pixels mm-1Rint = 0.059
φ and ω scansθmax = 26.4°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −13→11
Tmin = 0.92, Tmax = 0.99k = −9→9
18214 measured reflectionsl = −36→37
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H-atom parameters constrained
wR(F2) = 0.134w = 1/[σ2(Fo2) + (0.0634P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
2691 reflectionsΔρmax = 0.19 e Å3
174 parametersΔρmin = −0.15 e Å3
0 restraintsExtinction correction: SHELXL
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0109 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.09900 (13)0.62840 (18)1.00369 (4)0.0625 (4)
O10.07689 (13)0.4619 (2)1.07455 (5)0.0652 (5)
H10.05430.50681.05150.098*
C120.27179 (18)0.5570 (2)1.04643 (6)0.0443 (5)
C130.19982 (19)0.4740 (2)1.07803 (6)0.0488 (5)
C110.21235 (18)0.6346 (2)1.00794 (6)0.0472 (5)
C90.23958 (18)0.7440 (2)0.93309 (6)0.0511 (5)
H90.15810.71520.92810.061*
C10.33154 (19)0.8908 (3)0.81740 (6)0.0532 (5)
C100.28508 (18)0.7155 (2)0.97335 (6)0.0515 (5)
H100.36510.7480.97960.062*
C170.39835 (19)0.5612 (3)1.05313 (7)0.0567 (6)
H170.44760.61641.03270.068*
C80.30670 (19)0.8155 (2)0.89703 (6)0.0535 (5)
H80.38440.85790.9030.064*
C70.26596 (19)0.8255 (2)0.85581 (7)0.0554 (6)
H70.18680.78660.85080.066*
C60.4439 (2)0.9703 (3)0.82097 (7)0.0620 (6)
H60.47960.98440.84870.074*
C50.5037 (2)1.0290 (3)0.78378 (8)0.0762 (7)
H50.57941.08150.78660.091*
C150.3789 (2)0.4036 (3)1.11921 (7)0.0686 (6)
H150.41510.35111.14340.082*
C160.4517 (2)0.4863 (3)1.08888 (7)0.0671 (6)
H160.53620.4911.09280.081*
C140.2542 (2)0.3976 (3)1.11417 (7)0.0627 (6)
H140.20620.34231.1350.075*
C20.2808 (2)0.8734 (3)0.77533 (7)0.0663 (7)
H20.20520.82090.77210.08*
C30.3414 (3)0.9331 (3)0.73832 (7)0.0791 (8)
H30.30650.92050.71040.095*
C40.4522 (3)1.0105 (4)0.74271 (8)0.0822 (8)
H40.49291.05070.71780.099*
U11U22U33U12U13U23
O20.0432 (9)0.0774 (10)0.0669 (10)−0.0019 (7)−0.0019 (7)0.0144 (7)
O10.0552 (10)0.0791 (11)0.0615 (10)−0.0017 (8)0.0075 (7)0.0119 (8)
C120.0438 (13)0.0442 (11)0.0450 (11)0.0031 (9)0.0010 (9)−0.0063 (9)
C130.0491 (13)0.0487 (11)0.0485 (11)0.0033 (10)0.0014 (10)−0.0078 (9)
C110.0418 (12)0.0468 (11)0.0529 (12)−0.0010 (9)0.0037 (10)−0.0051 (9)
C90.0454 (13)0.0494 (12)0.0585 (13)0.0008 (10)0.0042 (10)−0.0005 (10)
C10.0542 (15)0.0540 (12)0.0515 (13)0.0060 (11)0.0009 (10)0.0018 (9)
C100.0447 (13)0.0557 (12)0.0540 (12)−0.0048 (10)−0.0008 (10)−0.0004 (10)
C170.0505 (14)0.0619 (14)0.0577 (13)0.0023 (10)−0.0012 (11)−0.0059 (10)
C80.0468 (12)0.0561 (12)0.0577 (13)−0.0039 (10)0.0033 (10)0.0043 (10)
C70.0499 (13)0.0580 (13)0.0583 (13)−0.0028 (10)−0.0025 (11)0.0024 (10)
C60.0575 (15)0.0729 (15)0.0555 (14)−0.0001 (12)0.0010 (11)0.0080 (11)
C50.0616 (16)0.0920 (18)0.0748 (17)0.0004 (13)0.0064 (13)0.0201 (14)
C150.0813 (19)0.0689 (14)0.0555 (14)0.0150 (13)−0.0163 (13)−0.0059 (12)
C160.0564 (15)0.0764 (16)0.0684 (16)0.0061 (12)−0.0148 (12)−0.0087 (13)
C140.0792 (17)0.0614 (14)0.0476 (12)0.0033 (12)0.0012 (12)−0.0001 (10)
C20.0660 (16)0.0763 (16)0.0566 (14)0.0051 (12)−0.0074 (12)0.0013 (11)
C30.086 (2)0.101 (2)0.0504 (14)0.0173 (16)−0.0046 (13)0.0067 (13)
C40.0790 (19)0.107 (2)0.0610 (17)0.0177 (16)0.0127 (14)0.0238 (14)
O2—C111.244 (2)C8—C71.324 (3)
O1—C131.348 (2)C8—H80.93
O1—H10.82C7—H70.93
C12—C171.395 (3)C6—C51.381 (3)
C12—C131.402 (3)C6—H60.93
C12—C111.469 (3)C5—C41.370 (3)
C13—C141.384 (3)C5—H50.93
C11—C101.463 (3)C15—C141.369 (3)
C9—C101.333 (2)C15—C161.381 (3)
C9—C81.431 (3)C15—H150.93
C9—H90.93C16—H160.93
C1—C61.385 (3)C14—H140.93
C1—C21.393 (3)C2—C31.383 (3)
C1—C71.460 (3)C2—H20.93
C10—H100.93C3—C41.364 (3)
C17—C161.365 (3)C3—H30.93
C17—H170.93C4—H40.93
C13—O1—H1109.5C8—C7—H7116.4
C17—C12—C13117.80 (18)C1—C7—H7116.4
C17—C12—C11122.77 (18)C5—C6—C1120.6 (2)
C13—C12—C11119.44 (18)C5—C6—H6119.7
O1—C13—C14117.13 (19)C1—C6—H6119.7
O1—C13—C12122.51 (18)C4—C5—C6120.5 (2)
C14—C13—C12120.4 (2)C4—C5—H5119.7
O2—C11—C10118.87 (17)C6—C5—H5119.7
O2—C11—C12120.23 (17)C14—C15—C16120.9 (2)
C10—C11—C12120.87 (17)C14—C15—H15119.5
C10—C9—C8124.9 (2)C16—C15—H15119.5
C10—C9—H9117.6C17—C16—C15119.3 (2)
C8—C9—H9117.6C17—C16—H16120.3
C6—C1—C2117.93 (19)C15—C16—H16120.3
C6—C1—C7122.38 (18)C15—C14—C13119.9 (2)
C2—C1—C7119.7 (2)C15—C14—H14120.1
C9—C10—C11121.70 (19)C13—C14—H14120.1
C9—C10—H10119.2C3—C2—C1120.9 (2)
C11—C10—H10119.2C3—C2—H2119.5
C16—C17—C12121.7 (2)C1—C2—H2119.5
C16—C17—H17119.1C4—C3—C2120.0 (2)
C12—C17—H17119.1C4—C3—H3120.0
C7—C8—C9124.6 (2)C2—C3—H3120.0
C7—C8—H8117.7C3—C4—C5120.0 (2)
C9—C8—H8117.7C3—C4—H4120.0
C8—C7—C1127.2 (2)C5—C4—H4120.0
C17—C12—C13—O1−179.60 (17)C6—C1—C7—C8−7.7 (3)
C11—C12—C13—O10.2 (3)C2—C1—C7—C8172.1 (2)
C17—C12—C13—C14−0.8 (3)C2—C1—C6—C5−0.5 (3)
C11—C12—C13—C14178.95 (17)C7—C1—C6—C5179.4 (2)
C17—C12—C11—O2−179.47 (18)C1—C6—C5—C40.5 (4)
C13—C12—C11—O20.8 (3)C12—C17—C16—C150.3 (3)
C17—C12—C11—C102.5 (3)C14—C15—C16—C17−0.9 (3)
C13—C12—C11—C10−177.20 (17)C16—C15—C14—C130.6 (3)
C8—C9—C10—C11−177.06 (18)O1—C13—C14—C15179.10 (18)
O2—C11—C10—C9−17.4 (3)C12—C13—C14—C150.2 (3)
C12—C11—C10—C9160.63 (18)C6—C1—C2—C30.3 (3)
C13—C12—C17—C160.5 (3)C7—C1—C2—C3−179.6 (2)
C11—C12—C17—C16−179.20 (18)C1—C2—C3—C4−0.1 (4)
C10—C9—C8—C7171.7 (2)C2—C3—C4—C50.0 (4)
C9—C8—C7—C1−177.45 (19)C6—C5—C4—C3−0.2 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.821.812.5317 (19)146.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O20.821.812.5317 (19)146
  5 in total

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Authors:  N J Lawrence; D Rennison; A T McGown; S Ducki; L A Gul; J A Hadfield; N Khan
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Journal:  Acta Crystallogr B       Date:  2002-05-29

3.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Synthesis, biological evaluation, and molecular docking studies of resveratrol derivatives possessing chalcone moiety as potential antitubulin agents.

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5.  Inhibitors and promoters of tubulin polymerization: synthesis and biological evaluation of chalcones and related dienones as potential anticancer agents.

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  5 in total
  1 in total

1.  Crystal structure of (2E,4E)-5-[bis-(2-hy-droxy-eth-yl)amino]-1-(4-chloro-phen-yl)-5-phenyl-penta-2,4-dien-1-one.

Authors:  Alexander A Golovanov; Anna V Vologzhanina; Ivan S Odin; Tat'yana P Tret'yakova; Sergey V Naumov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-10-24
  1 in total

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