Literature DB >> 22058829

5-Chloro-3-cyclo-pentyl-sulfonyl-2-methyl-1-benzofuran.

Pil Ja Seo, Hong Dae Choi, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(14)H(15)ClO(3)S, the cyclo-penyl ring adopts an envelope conformation. In the crystal, mol-ecules are linked by weak inter-molecular C-H⋯O hydrogen bonds into dual chains propagating in [100]. The dual chains arise from pairs of the same or different hydrogen bonds between adjacent molecules.

Entities:  

Year:  2011        PMID: 22058829      PMCID: PMC3201441          DOI: 10.1107/S160053681103933X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the crystal structures of related compounds, see: Seo et al. (2011a ▶,b ▶).

Experimental

Crystal data

C14H15ClO3S M = 298.77 Triclinic, a = 7.4833 (8) Å b = 8.7888 (9) Å c = 10.9061 (10) Å α = 66.919 (5)° β = 82.848 (6)° γ = 82.689 (6)° V = 652.31 (11) Å3 Z = 2 Mo Kα radiation μ = 0.45 mm−1 T = 173 K 0.39 × 0.27 × 0.22 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.844, T max = 0.905 11884 measured reflections 3252 independent reflections 2721 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.143 S = 1.05 3252 reflections 173 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.73 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681103933X/cv5153sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681103933X/cv5153Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681103933X/cv5153Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H15ClO3SZ = 2
Mr = 298.77F(000) = 312
Triclinic, P1Dx = 1.521 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.4833 (8) ÅCell parameters from 5081 reflections
b = 8.7888 (9) Åθ = 2.5–28.2°
c = 10.9061 (10) ŵ = 0.45 mm1
α = 66.919 (5)°T = 173 K
β = 82.848 (6)°Block, colourless
γ = 82.689 (6)°0.39 × 0.27 × 0.22 mm
V = 652.31 (11) Å3
Bruker SMART APEXII CCD diffractometer3252 independent reflections
Radiation source: rotating anode2721 reflections with I > 2σ(I)
graphite multilayerRint = 0.046
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 2.0°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→11
Tmin = 0.844, Tmax = 0.905l = −14→14
11884 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: difference Fourier map
wR(F2) = 0.143H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
3252 reflections(Δ/σ)max = 0.001
173 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.73 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.01806 (6)0.70534 (5)0.73025 (4)0.02070 (15)
Cl10.22626 (7)0.92775 (6)0.13290 (4)0.03364 (17)
O10.26706 (18)0.34648 (14)0.62681 (11)0.0261 (3)
O2−0.07756 (18)0.60437 (16)0.85224 (11)0.0291 (3)
O3−0.08387 (17)0.83205 (15)0.62857 (11)0.0257 (3)
C10.1369 (2)0.5756 (2)0.65566 (15)0.0210 (3)
C20.1864 (2)0.6199 (2)0.51383 (15)0.0209 (3)
C30.1721 (2)0.7648 (2)0.39920 (15)0.0225 (4)
H30.11940.86730.40300.027*
C40.2388 (3)0.7506 (2)0.28003 (16)0.0243 (4)
C50.3159 (3)0.6020 (2)0.27022 (17)0.0276 (4)
H50.35860.59940.18530.033*
C60.3301 (3)0.4594 (2)0.38371 (17)0.0274 (4)
H60.38180.35680.37970.033*
C70.2654 (2)0.4727 (2)0.50369 (15)0.0221 (4)
C80.1883 (2)0.4117 (2)0.71738 (16)0.0245 (4)
C90.1791 (3)0.2926 (2)0.85921 (17)0.0321 (4)
H9A0.12290.35030.91690.048*
H9B0.30150.24680.88480.048*
H9C0.10680.20230.86930.048*
C100.1818 (2)0.8010 (2)0.77215 (15)0.0232 (4)
H100.11630.87550.81580.028*
C110.3143 (3)0.6800 (2)0.86896 (17)0.0295 (4)
H11A0.25770.63880.96180.035*
H11B0.35680.58420.84360.035*
C120.4688 (3)0.7835 (3)0.85509 (18)0.0328 (4)
H12A0.58590.71570.85950.039*
H12B0.45560.82530.92810.039*
C130.4615 (3)0.9290 (2)0.71898 (19)0.0327 (4)
H13A0.44231.03610.73100.039*
H13B0.57580.92760.66290.039*
C140.3028 (3)0.9064 (2)0.65330 (16)0.0278 (4)
H14A0.23851.01470.60280.033*
H14B0.34460.84830.59200.033*
U11U22U33U12U13U23
S10.0169 (3)0.0228 (2)0.0204 (2)0.00049 (18)−0.00042 (16)−0.00706 (17)
Cl10.0423 (3)0.0320 (3)0.0211 (2)−0.0046 (2)−0.00045 (19)−0.00445 (19)
O10.0293 (8)0.0185 (6)0.0285 (6)0.0010 (5)−0.0056 (5)−0.0068 (5)
O20.0240 (7)0.0365 (7)0.0233 (6)−0.0060 (6)0.0040 (5)−0.0084 (5)
O30.0214 (7)0.0259 (6)0.0272 (6)0.0044 (5)−0.0051 (5)−0.0082 (5)
C10.0198 (9)0.0212 (8)0.0210 (7)−0.0016 (7)−0.0013 (6)−0.0070 (6)
C20.0180 (9)0.0215 (8)0.0235 (7)−0.0010 (7)−0.0017 (6)−0.0092 (6)
C30.0212 (9)0.0217 (8)0.0238 (7)−0.0002 (7)−0.0019 (6)−0.0085 (6)
C40.0233 (10)0.0263 (8)0.0218 (7)−0.0041 (7)−0.0018 (6)−0.0071 (6)
C50.0243 (10)0.0352 (10)0.0276 (8)−0.0022 (8)−0.0002 (7)−0.0175 (8)
C60.0263 (10)0.0258 (8)0.0350 (9)0.0027 (8)−0.0045 (7)−0.0176 (7)
C70.0209 (9)0.0193 (7)0.0250 (7)−0.0007 (7)−0.0041 (6)−0.0070 (6)
C80.0221 (10)0.0233 (8)0.0272 (8)−0.0024 (7)−0.0039 (7)−0.0079 (7)
C90.0375 (12)0.0222 (8)0.0295 (8)−0.0025 (8)−0.0084 (8)−0.0007 (7)
C100.0202 (9)0.0247 (8)0.0245 (7)0.0015 (7)−0.0009 (6)−0.0105 (7)
C110.0276 (11)0.0326 (9)0.0252 (8)−0.0018 (8)−0.0059 (7)−0.0068 (7)
C120.0241 (11)0.0447 (11)0.0293 (9)−0.0041 (9)−0.0041 (7)−0.0129 (8)
C130.0289 (12)0.0274 (9)0.0411 (10)−0.0038 (8)−0.0058 (8)−0.0109 (8)
C140.0267 (11)0.0265 (8)0.0266 (8)−0.0038 (8)−0.0033 (7)−0.0054 (7)
S1—O21.4382 (12)C8—C91.488 (2)
S1—O31.4415 (11)C9—H9A0.9800
S1—C11.7441 (16)C9—H9B0.9800
S1—C101.7664 (18)C9—H9C0.9800
Cl1—C41.7463 (17)C10—C141.529 (2)
O1—C81.365 (2)C10—C111.530 (2)
O1—C71.3662 (18)C10—H101.0000
C1—C81.356 (2)C11—C121.517 (3)
C1—C21.450 (2)C11—H11A0.9900
C2—C71.392 (2)C11—H11B0.9900
C2—C31.395 (2)C12—C131.535 (3)
C3—C41.380 (2)C12—H12A0.9900
C3—H30.9500C12—H12B0.9900
C4—C51.397 (3)C13—C141.531 (3)
C5—C61.378 (2)C13—H13A0.9900
C5—H50.9500C13—H13B0.9900
C6—C71.381 (2)C14—H14A0.9900
C6—H60.9500C14—H14B0.9900
O2—S1—O3118.65 (8)C8—C9—H9C109.5
O2—S1—C1108.48 (8)H9A—C9—H9C109.5
O3—S1—C1106.51 (7)H9B—C9—H9C109.5
O2—S1—C10108.07 (8)C14—C10—C11104.30 (15)
O3—S1—C10108.11 (8)C14—C10—S1114.73 (12)
C1—S1—C10106.39 (8)C11—C10—S1114.46 (12)
C8—O1—C7106.90 (12)C14—C10—H10107.7
C8—C1—C2107.01 (14)C11—C10—H10107.7
C8—C1—S1126.67 (12)S1—C10—H10107.7
C2—C1—S1126.15 (12)C12—C11—C10103.74 (15)
C7—C2—C3120.01 (14)C12—C11—H11A111.0
C7—C2—C1104.43 (14)C10—C11—H11A111.0
C3—C2—C1135.56 (15)C12—C11—H11B111.0
C4—C3—C2116.08 (15)C10—C11—H11B111.0
C4—C3—H3122.0H11A—C11—H11B109.0
C2—C3—H3122.0C11—C12—C13107.18 (15)
C3—C4—C5123.68 (16)C11—C12—H12A110.3
C3—C4—Cl1118.36 (13)C13—C12—H12A110.3
C5—C4—Cl1117.96 (13)C11—C12—H12B110.3
C6—C5—C4120.02 (15)C13—C12—H12B110.3
C6—C5—H5120.0H12A—C12—H12B108.5
C4—C5—H5120.0C14—C13—C12106.39 (17)
C5—C6—C7116.75 (15)C14—C13—H13A110.5
C5—C6—H6121.6C12—C13—H13A110.5
C7—C6—H6121.6C14—C13—H13B110.5
O1—C7—C6125.78 (14)C12—C13—H13B110.5
O1—C7—C2110.78 (13)H13A—C13—H13B108.6
C6—C7—C2123.44 (15)C10—C14—C13103.38 (14)
C1—C8—O1110.88 (14)C10—C14—H14A111.1
C1—C8—C9134.00 (15)C13—C14—H14A111.1
O1—C8—C9115.11 (14)C10—C14—H14B111.1
C8—C9—H9A109.5C13—C14—H14B111.1
C8—C9—H9B109.5H14A—C14—H14B109.1
H9A—C9—H9B109.5
O2—S1—C1—C8−22.22 (19)C1—C2—C7—O1−0.2 (2)
O3—S1—C1—C8−151.00 (17)C3—C2—C7—C6−1.1 (3)
C10—S1—C1—C893.83 (18)C1—C2—C7—C6179.06 (17)
O2—S1—C1—C2152.39 (16)C2—C1—C8—O10.0 (2)
O3—S1—C1—C223.61 (18)S1—C1—C8—O1175.43 (13)
C10—S1—C1—C2−91.55 (17)C2—C1—C8—C9179.0 (2)
C8—C1—C2—C70.1 (2)S1—C1—C8—C9−5.5 (3)
S1—C1—C2—C7−175.35 (14)C7—O1—C8—C1−0.1 (2)
C8—C1—C2—C3−179.7 (2)C7—O1—C8—C9−179.37 (15)
S1—C1—C2—C34.8 (3)O2—S1—C10—C14176.93 (11)
C7—C2—C3—C40.3 (3)O3—S1—C10—C14−53.47 (13)
C1—C2—C3—C4−179.85 (19)C1—S1—C10—C1460.60 (13)
C2—C3—C4—C50.5 (3)O2—S1—C10—C1156.38 (14)
C2—C3—C4—Cl1−179.62 (13)O3—S1—C10—C11−174.02 (12)
C3—C4—C5—C6−0.6 (3)C1—S1—C10—C11−59.95 (13)
Cl1—C4—C5—C6179.48 (15)C14—C10—C11—C1237.10 (17)
C4—C5—C6—C7−0.1 (3)S1—C10—C11—C12163.27 (12)
C8—O1—C7—C6−179.05 (19)C10—C11—C12—C13−22.06 (19)
C8—O1—C7—C20.2 (2)C11—C12—C13—C14−1.1 (2)
C5—C6—C7—O1−179.91 (17)C11—C10—C14—C13−37.65 (17)
C5—C6—C7—C20.9 (3)S1—C10—C14—C13−163.66 (12)
C3—C2—C7—O1179.66 (15)C12—C13—C14—C1023.73 (18)
D—H···AD—HH···AD···AD—H···A
C3—H3···O3i0.952.513.420 (2)160.
C12—H12A···O2ii0.992.593.557 (2)167.
C13—H13B···O3ii0.992.613.516 (3)153.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O3i0.952.513.420 (2)160
C12—H12A⋯O2ii0.992.593.557 (2)167
C13—H13B⋯O3ii0.992.613.516 (3)153

Symmetry codes: (i) ; (ii) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

6.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

7.  5-Bromo-3-cyclo-pentyl-sulfinyl-2-methyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-11

8.  3-Cyclo-pentyl-sulfonyl-5-fluoro-2-methyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-18
  8 in total

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