Literature DB >> 22058759

2-Methyl-1-phenyl-sulfonyl-1H-indole-3-carbaldehyde.

C Ramathilagam, V Saravanan, A K Mohanakrishnan, P R Umarani, V Manivannan.   

Abstract

In the title compound, C(16)H(13)NO(3)S, the sulfonyl-bound phenyl ring forms a dihedral angle of 84.17 (6)° with the indole ring system. An intra-molecular C-H⋯O hydrogen bond generates an S(6) ring motif. The crystal structure exhibits weak inter-molecular C-H⋯O hydrogen bonds and π-π inter-actions between the five- and six-membered rings of the indole group [centroid-centroid distance = 3.6871 (9) Å].

Entities:  

Year:  2011        PMID: 22058759      PMCID: PMC3201221          DOI: 10.1107/S1600536811035665

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activities of indole compounds, see: Chai et al. (2006 ▶); Singh et al. (2000 ▶); Andreani et al. (2001 ▶). For related structures, see: Chakkaravarthi et al. (2007 ▶, 2008 ▶); Ramathilagam et al. (2011 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C16H13NO3S M = 299.33 Monoclinic, a = 11.6305 (5) Å b = 8.4039 (4) Å c = 14.3128 (8) Å β = 93.126 (1)° V = 1396.87 (12) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 295 K 0.22 × 0.20 × 0.18 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.949, T max = 0.958 18442 measured reflections 4242 independent reflections 3212 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.116 S = 1.06 4242 reflections 191 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811035665/ci5199sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811035665/ci5199Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811035665/ci5199Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13NO3SF(000) = 624
Mr = 299.33Dx = 1.423 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2YbcCell parameters from 4242 reflections
a = 11.6305 (5) Åθ = 2.8–30.5°
b = 8.4039 (4) ŵ = 0.24 mm1
c = 14.3128 (8) ÅT = 295 K
β = 93.126 (1)°Block, colourless
V = 1396.87 (12) Å30.22 × 0.20 × 0.18 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer4242 independent reflections
Radiation source: fine-focus sealed tube3212 reflections with I > 2σ(I)
graphiteRint = 0.024
ω and φ scansθmax = 30.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→16
Tmin = 0.949, Tmax = 0.958k = −11→11
18442 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.051P)2 + 0.3293P] where P = (Fo2 + 2Fc2)/3
4242 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.51033 (11)1.03657 (16)0.11957 (9)0.0372 (3)
C20.62740 (13)1.0134 (2)0.14228 (11)0.0488 (3)
H20.67941.09680.13820.059*
C30.66431 (13)0.8654 (2)0.17072 (12)0.0541 (4)
H30.74200.84860.18630.065*
C40.58737 (14)0.7403 (2)0.17652 (11)0.0509 (4)
H40.61480.64120.19610.061*
C50.47145 (13)0.75842 (17)0.15415 (10)0.0442 (3)
H50.42030.67390.15810.053*
C60.43434 (11)0.90840 (16)0.12546 (9)0.0356 (3)
C70.33085 (13)1.12984 (17)0.07792 (10)0.0429 (3)
C80.44359 (12)1.17348 (17)0.08955 (9)0.0412 (3)
C90.22868 (16)1.2312 (2)0.05301 (14)0.0655 (5)
H9A0.25271.33990.04720.098*
H9B0.17471.22330.10120.098*
H9C0.19291.1958−0.00530.098*
C100.48781 (17)1.3321 (2)0.07368 (12)0.0559 (4)
H100.43551.41090.05450.067*
C110.13200 (11)0.92243 (17)0.19354 (9)0.0395 (3)
C120.18938 (12)0.90248 (19)0.27999 (10)0.0457 (3)
H120.26400.86240.28450.055*
C130.13415 (16)0.9431 (2)0.35933 (11)0.0569 (4)
H130.17170.93130.41800.068*
C140.02338 (16)1.0010 (2)0.35188 (13)0.0624 (4)
H14−0.01381.02700.40580.075*
C15−0.03304 (14)1.0211 (2)0.26584 (13)0.0613 (4)
H15−0.10781.06080.26180.074*
C160.02108 (12)0.9824 (2)0.18524 (11)0.0516 (4)
H16−0.01630.99640.12670.062*
N10.32271 (9)0.96653 (14)0.09734 (8)0.0411 (3)
O10.23308 (10)0.69878 (14)0.10309 (9)0.0575 (3)
O20.13304 (10)0.91043 (19)0.01249 (8)0.0667 (4)
O30.58819 (13)1.36833 (15)0.08380 (10)0.0742 (4)
S10.20015 (3)0.86138 (5)0.09314 (2)0.04468 (12)
U11U22U33U12U13U23
C10.0448 (6)0.0379 (7)0.0289 (6)−0.0030 (5)0.0030 (5)−0.0032 (5)
C20.0440 (7)0.0547 (9)0.0472 (8)−0.0074 (6)−0.0017 (6)−0.0046 (7)
C30.0436 (7)0.0656 (11)0.0522 (9)0.0079 (7)−0.0060 (6)−0.0027 (8)
C40.0571 (8)0.0483 (9)0.0471 (8)0.0133 (7)0.0004 (6)0.0037 (7)
C50.0496 (7)0.0387 (7)0.0446 (7)0.0006 (6)0.0056 (6)0.0048 (6)
C60.0385 (6)0.0379 (7)0.0307 (6)0.0009 (5)0.0045 (5)0.0004 (5)
C70.0510 (7)0.0415 (7)0.0364 (7)0.0070 (6)0.0045 (6)0.0049 (6)
C80.0537 (8)0.0364 (7)0.0336 (6)−0.0022 (6)0.0026 (5)−0.0003 (5)
C90.0608 (10)0.0607 (11)0.0750 (12)0.0181 (8)0.0052 (9)0.0158 (9)
C100.0760 (11)0.0397 (8)0.0511 (9)−0.0074 (7)−0.0044 (8)0.0027 (7)
C110.0338 (6)0.0439 (7)0.0407 (7)−0.0018 (5)0.0020 (5)0.0007 (6)
C120.0411 (7)0.0510 (8)0.0445 (8)0.0027 (6)−0.0011 (6)0.0027 (6)
C130.0653 (10)0.0651 (11)0.0400 (8)0.0036 (8)0.0012 (7)0.0007 (7)
C140.0630 (10)0.0713 (12)0.0545 (10)0.0056 (9)0.0169 (8)−0.0067 (9)
C150.0439 (8)0.0717 (12)0.0690 (11)0.0132 (8)0.0091 (7)−0.0060 (9)
C160.0385 (7)0.0648 (10)0.0508 (8)0.0050 (6)−0.0042 (6)0.0012 (7)
N10.0372 (5)0.0421 (7)0.0442 (6)−0.0003 (4)0.0050 (4)0.0063 (5)
O10.0532 (6)0.0470 (6)0.0737 (8)−0.0101 (5)0.0156 (5)−0.0129 (6)
O20.0536 (6)0.1042 (11)0.0411 (6)−0.0050 (7)−0.0075 (5)−0.0038 (6)
O30.0809 (9)0.0546 (8)0.0847 (10)−0.0268 (7)−0.0179 (7)0.0078 (7)
S10.03861 (17)0.0548 (2)0.0407 (2)−0.00535 (14)0.00263 (13)−0.00445 (15)
C1—C21.3962 (19)C9—H9C0.96
C1—C61.3988 (18)C10—O31.207 (2)
C1—C81.4404 (19)C10—H100.93
C2—C31.370 (2)C11—C121.3835 (19)
C2—H20.93C11—C161.3841 (19)
C3—C41.386 (2)C11—S11.7552 (14)
C3—H30.93C12—C131.378 (2)
C4—C51.377 (2)C12—H120.93
C4—H40.93C13—C141.376 (2)
C5—C61.3871 (19)C13—H130.93
C5—H50.93C14—C151.374 (3)
C6—N11.4246 (16)C14—H140.93
C7—C81.363 (2)C15—C161.383 (2)
C7—N11.4046 (19)C15—H150.93
C7—C91.490 (2)C16—H160.93
C8—C101.451 (2)N1—S11.6753 (12)
C9—H9A0.96O1—S11.4242 (13)
C9—H9B0.96O2—S11.4190 (12)
C2—C1—C6119.32 (13)O3—C10—C8124.15 (17)
C2—C1—C8133.15 (13)O3—C10—H10117.9
C6—C1—C8107.53 (12)C8—C10—H10117.9
C3—C2—C1118.80 (14)C12—C11—C16121.52 (13)
C3—C2—H2120.6C12—C11—S1118.64 (10)
C1—C2—H2120.6C16—C11—S1119.77 (11)
C2—C3—C4120.88 (14)C13—C12—C11118.90 (14)
C2—C3—H3119.6C13—C12—H12120.6
C4—C3—H3119.6C11—C12—H12120.6
C5—C4—C3121.96 (15)C14—C13—C12120.02 (15)
C5—C4—H4119.0C14—C13—H13120.0
C3—C4—H4119.0C12—C13—H13120.0
C4—C5—C6117.02 (14)C15—C14—C13120.82 (15)
C4—C5—H5121.5C15—C14—H14119.6
C6—C5—H5121.5C13—C14—H14119.6
C5—C6—C1122.02 (12)C14—C15—C16120.14 (15)
C5—C6—N1131.25 (12)C14—C15—H15119.9
C1—C6—N1106.74 (12)C16—C15—H15119.9
C8—C7—N1108.28 (12)C15—C16—C11118.59 (14)
C8—C7—C9128.68 (14)C15—C16—H16120.7
N1—C7—C9123.01 (14)C11—C16—H16120.7
C7—C8—C1108.71 (12)C7—N1—C6108.71 (11)
C7—C8—C10125.09 (14)C7—N1—S1125.08 (10)
C1—C8—C10126.20 (14)C6—N1—S1126.14 (10)
C7—C9—H9A109.5O2—S1—O1119.54 (8)
C7—C9—H9B109.5O2—S1—N1107.77 (7)
H9A—C9—H9B109.5O1—S1—N1106.19 (6)
C7—C9—H9C109.5O2—S1—C11109.16 (7)
H9A—C9—H9C109.5O1—S1—C11109.24 (7)
H9B—C9—H9C109.5N1—S1—C11103.76 (6)
C6—C1—C2—C3−0.7 (2)C13—C14—C15—C160.2 (3)
C8—C1—C2—C3178.78 (15)C14—C15—C16—C110.5 (3)
C1—C2—C3—C40.3 (2)C12—C11—C16—C15−0.7 (2)
C2—C3—C4—C50.1 (2)S1—C11—C16—C15176.34 (13)
C3—C4—C5—C6−0.1 (2)C8—C7—N1—C62.23 (15)
C4—C5—C6—C1−0.2 (2)C9—C7—N1—C6−175.57 (14)
C4—C5—C6—N1179.63 (14)C8—C7—N1—S1179.33 (10)
C2—C1—C6—C50.6 (2)C9—C7—N1—S11.5 (2)
C8—C1—C6—C5−178.94 (12)C5—C6—N1—C7178.03 (14)
C2—C1—C6—N1−179.26 (12)C1—C6—N1—C7−2.08 (14)
C8—C1—C6—N11.17 (14)C5—C6—N1—S11.0 (2)
N1—C7—C8—C1−1.48 (16)C1—C6—N1—S1−179.15 (9)
C9—C7—C8—C1176.15 (15)C7—N1—S1—O241.89 (14)
N1—C7—C8—C10178.30 (13)C6—N1—S1—O2−141.51 (11)
C9—C7—C8—C10−4.1 (3)C7—N1—S1—O1171.10 (11)
C2—C1—C8—C7−179.31 (15)C6—N1—S1—O1−12.30 (13)
C6—C1—C8—C70.18 (15)C7—N1—S1—C11−73.79 (13)
C2—C1—C8—C100.9 (2)C6—N1—S1—C11102.82 (12)
C6—C1—C8—C10−179.60 (13)C12—C11—S1—O2−172.81 (12)
C7—C8—C10—O3−179.51 (16)C16—C11—S1—O210.03 (16)
C1—C8—C10—O30.2 (3)C12—C11—S1—O154.80 (13)
C16—C11—C12—C130.2 (2)C16—C11—S1—O1−122.36 (13)
S1—C11—C12—C13−176.90 (13)C12—C11—S1—N1−58.13 (13)
C11—C12—C13—C140.6 (3)C16—C11—S1—N1124.72 (13)
C12—C13—C14—C15−0.8 (3)
D—H···AD—HH···AD···AD—H···A
C5—H5···O10.932.282.8723 (19)121
C12—H12···O3i0.932.483.1664 (19)131
C16—H16···O2ii0.932.483.388 (2)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O10.932.282.8723 (19)121
C12—H12⋯O3i0.932.483.1664 (19)131
C16—H16⋯O2ii0.932.483.388 (2)167

Symmetry codes: (i) ; (ii) .

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Authors:  G Chakkaravarthi; V Dhayalan; A K Mohanakrishnan; V Manivannan
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

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