Literature DB >> 22058684

catena-Poly[[triaqua-nickel(II)]-μ-5-carb-oxy-benzene-1,3-dicarboxyl-ato-κO:O].

Xing-Jun Yao, Qian Yuan.   

Abstract

In the title compound, [Ni(C(9)H(4)O(6))(H(2)O)(3)](n), the Ni(II) ion has a distorted NiO(5) square-pyramidal geometry, the maximum deviation from the least-squares plane formed by the basal atoms being 0.9351 (13) Å. The basal plane is formed by two O atoms from carboxyl-ate residues of the 5-carb-oxy-benzene-1,3-dicarboxyl-ate ligand and by two O atoms from water mol-ecules. The O atom of the third water mol-ecule is axially positioned, 1.7890 (19) Å perpendicular to the basal plane. The 5-carb-oxy-benzene-1,3-dicarboxyl-ate ligand bridges the metal atoms, forming a polymeric chain along the b axis. O-H⋯O hydrogen bonds between the water mol-ecules and carboxyl-ate groups stabilize the crystal structure.

Entities:  

Year:  2011        PMID: 22058684      PMCID: PMC3201226          DOI: 10.1107/S1600536811035227

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications and stuctures of related metal complexes of 1,3,5-benzene­tricarb­oxy­lic acid, see: Xia et al. (2004 ▶); Modec & Brencic (2005 ▶); Wei & Han (2005 ▶); Han & Wei (2005 ▶); Wang et al. (2005 ▶); Che et al. (2008 ▶); He et al. (2008 ▶); Li et al. (2008 ▶); Gao et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Ni(C9H4O6)(H2O)3] M = 320.88 Monoclinic, a = 6.838 (2) Å b = 18.809 (5) Å c = 10.705 (3) Å β = 126.901 (14)° V = 1101.0 (5) Å3 Z = 4 Mo Kα radiation μ = 1.81 mm−1 T = 296 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.613, T max = 0.714 7973 measured reflections 1938 independent reflections 1864 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.102 S = 1.01 1938 reflections 173 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811035227/go2022sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811035227/go2022Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C9H4O6)(H2O)3]F(000) = 656
Mr = 320.88Dx = 1.936 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6807 reflections
a = 6.838 (2) Åθ = 2.6–27.8°
b = 18.809 (5) ŵ = 1.81 mm1
c = 10.705 (3) ÅT = 296 K
β = 126.901 (14)°Block, green
V = 1101.0 (5) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer1938 independent reflections
Radiation source: fine-focus sealed tube1864 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −8→8
Tmin = 0.613, Tmax = 0.714k = −22→21
7973 measured reflectionsl = −10→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.023H-atom parameters constrained
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.0942P)2 + 0.090P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.002
1938 reflectionsΔρmax = 0.32 e Å3
173 parametersΔρmin = −0.38 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.036 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1199 (3)0.63000 (10)0.3748 (2)0.0228 (4)
C20.2227 (3)0.56454 (10)0.4747 (2)0.0203 (4)
C30.3935 (3)0.57173 (10)0.6364 (2)0.0213 (4)
H30.44310.61680.68060.026*
C40.4892 (3)0.51227 (11)0.7312 (2)0.0220 (4)
C50.4154 (3)0.44487 (11)0.6640 (2)0.0231 (4)
H50.48050.40470.72730.028*
C60.2465 (3)0.43711 (10)0.5040 (2)0.0196 (4)
C70.1480 (3)0.49745 (10)0.4085 (2)0.0209 (4)
H70.03270.49250.30100.025*
C80.6645 (4)0.51904 (11)0.9031 (2)0.0281 (5)
C90.1625 (3)0.36441 (10)0.4346 (2)0.0214 (4)
Ni10.11091 (4)0.773616 (12)0.32089 (3)0.01894 (19)
O10.2116 (3)0.68864 (7)0.44634 (16)0.0274 (4)
O2−0.0451 (3)0.62603 (8)0.23299 (18)0.0408 (4)
O30.7481 (3)0.58432 (8)0.95119 (18)0.0371 (4)
H3A0.83910.58531.04700.056*
O40.7292 (4)0.47053 (9)0.99436 (19)0.0532 (6)
O50.2577 (3)0.31100 (8)0.51934 (18)0.0314 (4)
O6−0.0066 (3)0.36214 (7)0.28913 (17)0.0304 (4)
O1W−0.1375 (4)0.78863 (9)0.3587 (2)0.0448 (5)
H1W−0.08230.82660.41230.067*
H2W−0.10970.75630.42300.067*
O2W0.3070 (3)0.74742 (11)0.2478 (2)0.0430 (4)
H4W0.43880.72410.30760.065*
H3W0.32680.77120.18860.065*
O3W0.4158 (3)0.82950 (8)0.53994 (18)0.0394 (4)
H5W0.43120.87440.54320.059*
H6W0.55070.81320.56470.059*
U11U22U33U12U13U23
C10.0263 (9)0.0193 (10)0.0166 (9)0.0008 (7)0.0096 (7)−0.0008 (8)
C20.0241 (9)0.0153 (10)0.0193 (9)−0.0015 (7)0.0119 (8)0.0002 (7)
C30.0246 (9)0.0140 (10)0.0209 (9)−0.0032 (7)0.0113 (8)−0.0021 (8)
C40.0240 (10)0.0193 (9)0.0181 (10)−0.0005 (8)0.0103 (8)−0.0008 (8)
C50.0285 (9)0.0155 (10)0.0227 (10)0.0014 (7)0.0141 (8)0.0032 (7)
C60.0238 (9)0.0163 (10)0.0192 (9)−0.0016 (7)0.0132 (8)−0.0018 (7)
C70.0239 (9)0.0194 (10)0.0181 (9)−0.0020 (8)0.0119 (8)−0.0025 (8)
C80.0316 (10)0.0233 (11)0.0215 (10)−0.0010 (8)0.0117 (9)−0.0021 (8)
C90.0246 (9)0.0170 (10)0.0243 (10)−0.0003 (7)0.0157 (8)−0.0014 (8)
Ni10.0249 (2)0.0112 (3)0.0160 (3)0.00245 (7)0.00978 (19)0.00329 (7)
O10.0346 (8)0.0141 (7)0.0212 (7)−0.0010 (5)0.0102 (6)0.0009 (6)
O20.0520 (10)0.0239 (9)0.0193 (8)0.0012 (7)0.0070 (7)0.0010 (7)
O30.0508 (10)0.0231 (8)0.0189 (8)−0.0080 (7)0.0111 (7)−0.0034 (6)
O40.0761 (13)0.0245 (9)0.0189 (8)−0.0031 (8)0.0072 (8)0.0062 (7)
O50.0348 (8)0.0179 (8)0.0331 (8)−0.0015 (6)0.0159 (7)0.0024 (6)
O60.0358 (8)0.0196 (7)0.0222 (7)−0.0037 (6)0.0102 (6)−0.0057 (6)
O1W0.0583 (11)0.0283 (8)0.0682 (13)0.0123 (9)0.0489 (11)0.0156 (9)
O2W0.0453 (10)0.0524 (11)0.0384 (9)0.0201 (9)0.0289 (9)0.0161 (9)
O3W0.0399 (8)0.0279 (9)0.0331 (8)−0.0027 (7)0.0126 (7)−0.0066 (7)
C1—O21.236 (3)C9—O51.244 (2)
C1—O11.273 (2)C9—O61.266 (3)
C1—C21.500 (3)Ni1—O6i1.9129 (15)
C2—C71.386 (3)Ni1—O11.9292 (14)
C2—C31.397 (3)Ni1—O2W1.9781 (17)
C3—C41.383 (3)Ni1—O1W1.9884 (18)
C3—H30.9300Ni1—O3W2.2536 (16)
C4—C51.394 (3)O3—H3A0.8200
C4—C81.480 (3)O6—Ni1ii1.9129 (15)
C5—C61.383 (3)O1W—H1W0.8501
C5—H50.9300O1W—H2W0.8500
C6—C71.400 (3)O2W—H4W0.8501
C6—C91.496 (3)O2W—H3W0.8500
C7—H70.9300O3W—H5W0.8501
C8—O41.210 (3)O3W—H6W0.8500
C8—O31.321 (3)
O2—C1—O1123.25 (18)O5—C9—C6119.96 (17)
O2—C1—C2121.17 (17)O6—C9—C6115.87 (16)
O1—C1—C2115.58 (16)O6i—Ni1—O1174.25 (7)
C7—C2—C3119.92 (18)O6i—Ni1—O2W93.67 (7)
C7—C2—C1120.79 (17)O1—Ni1—O2W91.48 (7)
C3—C2—C1119.28 (17)O6i—Ni1—O1W87.32 (7)
C4—C3—C2120.44 (18)O1—Ni1—O1W88.13 (7)
C4—C3—H3119.8O2W—Ni1—O1W168.69 (8)
C2—C3—H3119.8O6i—Ni1—O3W90.27 (6)
C3—C4—C5119.43 (18)O1—Ni1—O3W86.65 (6)
C3—C4—C8121.08 (18)O2W—Ni1—O3W96.01 (8)
C5—C4—C8119.48 (17)O1W—Ni1—O3W95.25 (8)
C6—C5—C4120.64 (18)C1—O1—Ni1117.27 (12)
C6—C5—H5119.7C8—O3—H3A109.5
C4—C5—H5119.7C9—O6—Ni1ii120.96 (13)
C5—C6—C7119.76 (18)Ni1—O1W—H1W99.8
C5—C6—C9119.82 (18)Ni1—O1W—H2W105.1
C7—C6—C9120.37 (16)H1W—O1W—H2W105.1
C2—C7—C6119.80 (17)Ni1—O2W—H4W119.7
C2—C7—H7120.1Ni1—O2W—H3W127.8
C6—C7—H7120.1H4W—O2W—H3W105.1
O4—C8—O3121.55 (19)Ni1—O3W—H5W121.4
O4—C8—C4124.72 (19)Ni1—O3W—H6W108.0
O3—C8—C4113.73 (18)H5W—O3W—H6W105.1
O5—C9—O6124.16 (18)
O2—C1—C2—C74.9 (3)C3—C4—C8—O4169.1 (2)
O1—C1—C2—C7−176.04 (17)C5—C4—C8—O4−9.6 (3)
O2—C1—C2—C3−174.3 (2)C3—C4—C8—O3−10.9 (3)
O1—C1—C2—C34.8 (3)C5—C4—C8—O3170.43 (19)
C7—C2—C3—C40.2 (3)C5—C6—C9—O5−5.2 (3)
C1—C2—C3—C4179.35 (17)C7—C6—C9—O5177.22 (18)
C2—C3—C4—C50.6 (3)C5—C6—C9—O6174.46 (18)
C2—C3—C4—C8−178.15 (18)C7—C6—C9—O6−3.1 (3)
C3—C4—C5—C6−0.6 (3)O2—C1—O1—Ni1−7.3 (3)
C8—C4—C5—C6178.15 (19)C2—C1—O1—Ni1173.69 (13)
C4—C5—C6—C7−0.1 (3)O2W—Ni1—O1—C1−72.99 (16)
C4—C5—C6—C9−177.68 (17)O1W—Ni1—O1—C195.70 (16)
C3—C2—C7—C6−0.8 (3)O3W—Ni1—O1—C1−168.93 (15)
C1—C2—C7—C6179.97 (17)O5—C9—O6—Ni1ii−6.8 (3)
C5—C6—C7—C20.8 (3)C6—C9—O6—Ni1ii173.52 (12)
C9—C6—C7—C2178.38 (17)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O2iii0.821.812.568 (2)152.
O1W—H1W···O3iv0.852.212.869 (3)134.
O1W—H2W···O5v0.851.942.680 (2)145.
O2W—H4W···O5vi0.851.892.715 (2)165.
O3W—H5W···O4vii0.852.032.778 (2)147.
O3W—H6W···O2viii0.852.493.068 (3)126.
O2W—H3W···O1ix0.852.343.123 (2)154.
Table 1

Selected bond lengths (Å)

Ni1—O11.9292 (14)
Ni1—O2W1.9781 (17)
Ni1—O1W1.9884 (18)
Ni1—O3W2.2536 (16)
O6—Ni1i1.9129 (15)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O2ii0.821.812.568 (2)152
O1W—H1W⋯O3iii0.852.212.869 (3)134
O1W—H2W⋯O5iv0.851.942.680 (2)145
O2W—H4W⋯O5v0.851.892.715 (2)165
O3W—H5W⋯O4vi0.852.032.778 (2)147
O3W—H6W⋯O2vii0.852.493.068 (3)126
O2W—H3W⋯O1viii0.852.343.123 (2)154

Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  catena-Poly[[tri-aqua-copper(II)]-μ-5-carb-oxy-benzene-1,3-di-carboxyl-ato-κ(2) O (1):O (3)].

Authors:  Yu-Hong Ma; Pi-Zhuang Ma; Ting Yao; Jing-Tuan Hao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-12
  1 in total

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