Literature DB >> 22057531

Probing virus-glycan interactions using glycan microarrays.

Jamie Heimburg-Molinaro1, Mary Tappert, Xuezheng Song, Yi Lasanajak, Gillian Air, David F Smith, Richard D Cummings.   

Abstract

Glycan microarrays are surfaces that contain immobilized oligosaccharides or glycoconjugates and have proven useful in probing the interactions between glycan-binding proteins (GBPs) and individual glycans. Such glycan microarrays have been especially important in studying virus-glycan interactions, as most viruses express one or more GBPs important for pathogenesis. For studying interactions of influenza viruses with glycans, we describe protocols for fluorescent labeling of virus, addition of virus to a glycan microarray, analysis of a glycan microarray slide experiment, and interpretation of data.

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Year:  2012        PMID： 22057531      PMCID： PMC4930331          DOI： 10.1007/978-1-61779-373-8_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  11 in total

Review 1.  Glycans as receptors for influenza pathogenesis.

Authors:  Karthik Viswanathan; Aarthi Chandrasekaran; Aravind Srinivasan; Rahul Raman; V Sasisekharan; Ram Sasisekharan
Journal:  Glycoconj J       Date:  2010-08-24       Impact factor: 2.916

2.  The use of carbohydrate microarrays to study carbohydrate-cell interactions and to detect pathogens.

Authors:  Matthew D Disney; Peter H Seeberger
Journal:  Chem Biol       Date:  2004-12

3.  Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities.

Authors:  James Stevens; Ola Blixt; Laurel Glaser; Jeffery K Taubenberger; Peter Palese; James C Paulson; Ian A Wilson
Journal:  J Mol Biol       Date:  2005-11-18       Impact factor: 5.469

Review 4.  The promise of glycomics, glycan arrays and carbohydrate-based vaccines.

Authors:  Bernd Lepenies; Peter H Seeberger
Journal:  Immunopharmacol Immunotoxicol       Date:  2010-06       Impact factor: 2.730

5.  Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Authors:  Ola Blixt; Steve Head; Tony Mondala; Christopher Scanlan; Margaret E Huflejt; Richard Alvarez; Marian C Bryan; Fabio Fazio; Daniel Calarese; James Stevens; Nahid Razi; David J Stevens; John J Skehel; Irma van Die; Dennis R Burton; Ian A Wilson; Richard Cummings; Nicolai Bovin; Chi-Huey Wong; James C Paulson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-24       Impact factor: 11.205

Review 6.  Glycan array: a powerful tool for glycomics studies.

Authors:  Chi-Hui Liang; Chung-Yi Wu
Journal:  Expert Rev Proteomics       Date:  2009-12       Impact factor: 3.940

Review 7.  Evolving complexities of influenza virus and its receptors.

Authors:  John M Nicholls; Renee W Y Chan; Rupert J Russell; Gillian M Air; J S Malik Peiris
Journal:  Trends Microbiol       Date:  2008-03-28       Impact factor: 17.079

8.  Human parainfluenza viruses hPIV1 and hPIV3 bind oligosaccharides with alpha2-3-linked sialic acids that are distinct from those bound by H5 avian influenza virus hemagglutinin.

Authors:  Mary Amonsen; David F Smith; Richard D Cummings; Gillian M Air
Journal:  J Virol       Date:  2007-05-23       Impact factor: 5.103

9.  Deletions of neuraminidase and resistance to oseltamivir may be a consequence of restricted receptor specificity in recent H3N2 influenza viruses.

Authors:  Shelly Gulati; David F Smith; Gillian M Air
Journal:  Virol J       Date:  2009-02-14       Impact factor: 4.099

10.  Receptor binding specificity of recent human H3N2 influenza viruses.

Authors:  Kshama Kumari; Shelly Gulati; David F Smith; Upma Gulati; Richard D Cummings; Gillian M Air
Journal:  Virol J       Date:  2007-05-09       Impact factor: 4.099
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  16 in total

1.  "Stuck on sugars - how carbohydrates regulate cell adhesion, recognition, and signaling".

Authors:  Richard D Cummings
Journal:  Glycoconj J       Date:  2019-07-02       Impact factor: 2.916

2.  Cross-platform comparison of glycan microarray formats.

Authors:  Linlin Wang; Richard D Cummings; David F Smith; Margaret Huflejt; Christopher T Campbell; Jeffrey C Gildersleeve; Jared Q Gerlach; Michelle Kilcoyne; Lokesh Joshi; Sonia Serna; Niels-Christian Reichardt; Núria Parera Pera; Roland J Pieters; William Eng; Lara K Mahal
Journal:  Glycobiology       Date:  2014-03-22       Impact factor: 4.313

3.  Shotgun glycomics of pig lung identifies natural endogenous receptors for influenza viruses.

Authors:  Lauren Byrd-Leotis; Renpeng Liu; Konrad C Bradley; Yi Lasanajak; Sandra F Cummings; Xuezheng Song; Jamie Heimburg-Molinaro; Summer E Galloway; Marie R Culhane; David F Smith; David A Steinhauer; Richard D Cummings
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-19       Impact factor: 11.205

4.  Human milk contains novel glycans that are potential decoy receptors for neonatal rotaviruses.

Authors:  Ying Yu; Yi Lasanajak; Xuezheng Song; Liya Hu; Sasirekha Ramani; Megan L Mickum; David J Ashline; B V Venkataram Prasad; Mary K Estes; Vernon N Reinhold; Richard D Cummings; David F Smith
Journal:  Mol Cell Proteomics       Date:  2014-07-21       Impact factor: 5.911

Review 5.  Investigating virus-glycan interactions using glycan microarrays.

Authors:  David F Smith; Richard D Cummings
Journal:  Curr Opin Virol       Date:  2014-07-01       Impact factor: 7.090

6.  Capture and characterization of influenza A virus from primary samples using glycan bead arrays.

Authors:  Miriam Cohen; Christopher J Fisher; Mia L Huang; LeAnn L Lindsay; Magdalena Plancarte; Walter M Boyce; Kamil Godula; Pascal Gagneux
Journal:  Virology       Date:  2016-03-28       Impact factor: 3.616

7.  Glycan array analysis of influenza H1N1 binding and release.

Authors:  Shelly Gulati; Yi Lasanajak; David F Smith; Richard D Cummings; Gillian M Air
Journal:  Cancer Biomark       Date:  2014-01-01       Impact factor: 4.388

Review 8.  Carbohydrate microarrays.

Authors:  Sungjin Park; Jeffrey C Gildersleeve; Ola Blixt; Injae Shin
Journal:  Chem Soc Rev       Date:  2012-11-28       Impact factor: 54.564

9.  SARS-CoV-2 and other coronaviruses bind to phosphorylated glycans from the human lung.

Authors:  Lauren Byrd-Leotis; Yi Lasanajak; Thomas Bowen; Kelly Baker; Xuezheng Song; Mehul S Suthar; Richard D Cummings; David A Steinhauer
Journal:  Virology       Date:  2021-07-23       Impact factor: 3.513

10.  Glycan array analysis of Pholiota squarrosa lectin and other fucose-oriented lectins.

Authors:  López-Cortés Rubén; Muinelo-Romay Laura; Fernández-Briera Almudena; Gil Martín Emilio
Journal:  Glycobiology       Date:  2021-05-03       Impact factor: 4.313
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