Literature DB >> 22045997

Role of low-complexity sequences in the formation of novel protein coding sequences.

Macarena Toll-Riera1, Núria Radó-Trilla, Florian Martys, M Mar Albà.   

Abstract

Low-complexity sequences are extremely abundant in eukaryotic proteins for reasons that remain unclear. One hypothesis is that they contribute to the formation of novel coding sequences, facilitating the generation of novel protein functions. Here, we test this hypothesis by examining the content of low-complexity sequences in proteins of different age. We show that recently emerged proteins contain more low-complexity sequences than older proteins and that these sequences often form functional domains. These data are consistent with the idea that low-complexity sequences may play a key role in the emergence of novel genes.

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Year:  2011        PMID: 22045997     DOI: 10.1093/molbev/msr263

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  34 in total

1.  Cross-β polymerization and hydrogel formation by low-complexity sequence proteins.

Authors:  Masato Kato; Yi Lin; Steven L McKnight
Journal:  Methods       Date:  2017-06-15       Impact factor: 3.608

2.  A Molecular Portrait of De Novo Genes in Yeasts.

Authors:  Nikolaos Vakirlis; Alex S Hebert; Dana A Opulente; Guillaume Achaz; Chris Todd Hittinger; Gilles Fischer; Joshua J Coon; Ingrid Lafontaine
Journal:  Mol Biol Evol       Date:  2018-03-01       Impact factor: 16.240

Review 3.  Translational Control by Prion-like Proteins.

Authors:  Liying Li; J P McGinnis; Kausik Si
Journal:  Trends Cell Biol       Date:  2018-03-09       Impact factor: 20.808

4.  A first insight into the genome of Prototheca wickerhamii, a major causative agent of human protothecosis.

Authors:  Zofia Bakuła; Paweł Siedlecki; Robert Gromadka; Jan Gawor; Agnieszka Gromadka; Jan J Pomorski; Hanna Panagiotopoulou; Tomasz Jagielski
Journal:  BMC Genomics       Date:  2021-03-09       Impact factor: 3.969

5.  RNA nucleation by MSL2 induces selective X chromosome compartmentalization.

Authors:  Claudia Isabelle Keller Valsecchi; M Felicia Basilicata; Plamen Georgiev; Aline Gaub; Janine Seyfferth; Tanvi Kulkarni; Amol Panhale; Giuseppe Semplicio; Vinitha Manjunath; Herbert Holz; Pouria Dasmeh; Asifa Akhtar
Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

6.  Discovery of the Genomic Region and Candidate Genes of the Scarlet Red Flesh Color (Yscr ) Locus in Watermelon (Citrullus Lanatus L.).

Authors:  Na Li; Jianli Shang; Jiming Wang; Dan Zhou; Nannan Li; Shuangwu Ma
Journal:  Front Plant Sci       Date:  2020-02-19       Impact factor: 5.753

7.  A vast pool of lineage-specific microproteins encoded by long non-coding RNAs in plants.

Authors:  Igor Fesenko; Svetlana A Shabalina; Anna Mamaeva; Andrey Knyazev; Anna Glushkevich; Irina Lyapina; Rustam Ziganshin; Sergey Kovalchuk; Daria Kharlampieva; Vassili Lazarev; Michael Taliansky; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2021-10-11       Impact factor: 16.971

8.  Three glycoside hydrolase family 12 enzymes display diversity in substrate specificities and synergistic action between each other.

Authors:  Zhu Zhu; Jingyao Qu; Lele Yu; Xukai Jiang; Guodong Liu; Lushan Wang; Yinbo Qu; Yuqi Qin
Journal:  Mol Biol Rep       Date:  2019-07-29       Impact factor: 2.316

9.  Survey of Drought-Associated TAWRKY2-D1 Gene Diversity in Bread Wheat and Wheat Relatives.

Authors:  Olha Lakhneko; Anton Stepanenko; Yevhen Kuzminskiy; Nikolai Borisjuk; Bogdan Morgun
Journal:  Mol Biotechnol       Date:  2021-06-15       Impact factor: 2.695

Review 10.  Role of O-Linked N-Acetylglucosamine Protein Modification in Cellular (Patho)Physiology.

Authors:  John C Chatham; Jianhua Zhang; Adam R Wende
Journal:  Physiol Rev       Date:  2020-07-30       Impact factor: 37.312

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