Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Revised genome sequence of Brucella suis 1330.

Literature DB >> 22038969

Revised genome sequence of Brucella suis 1330.

Hongseok Tae¹, Shamira Shallom, Robert Settlage, Dale Preston, L Garry Adams, Harold R Garner.

Abstract

Brucella suis is a causative agent of porcine brucellosis. We report the resequencing of the original sample upon which the published sequence of Brucella suis 1330 is based and describe the differences between the published assembly and our assembly at 12 loci.

Entities: Disease Species

Mesh：

Year: 2011 PMID： 22038969 PMCID： PMC3209196 DOI： 10.1128/JB.06181-11

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

7 in total

1. ABySS: a parallel assembler for short read sequence data.

Authors: Jared T Simpson; Kim Wong; Shaun D Jackman; Jacqueline E Schein; Steven J M Jones; Inanç Birol
Journal: Genome Res Date: 2009-02-27 Impact factor: 9.043

Review 2. Brucellosis.

Authors: M Kathleen Glynn; Tracey V Lynn
Journal: J Am Vet Med Assoc Date: 2008-09-15 Impact factor: 1.936

3. The IncP island in the genome of Brucella suis 1330 was acquired by site-specific integration.

Authors: Jean-Philippe Lavigne; Annette C Vergunst; Gisèle Bourg; David O'Callaghan
Journal: Infect Immun Date: 2005-11 Impact factor: 3.441

4. Analysis of ten Brucella genomes reveals evidence for horizontal gene transfer despite a preferred intracellular lifestyle.

Authors: Alice R Wattam; Kelly P Williams; Eric E Snyder; Nalvo F Almeida; Maulik Shukla; A W Dickerman; O R Crasta; R Kenyon; J Lu; J M Shallom; H Yoo; T A Ficht; R M Tsolis; C Munk; R Tapia; C S Han; J C Detter; D Bruce; T S Brettin; Bruno W Sobral; Stephen M Boyle; João C Setubal
Journal: J Bacteriol Date: 2009-04-03 Impact factor: 3.490

5. The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.

Authors: Ian T Paulsen; Rekha Seshadri; Karen E Nelson; Jonathan A Eisen; John F Heidelberg; Timothy D Read; Robert J Dodson; Lowell Umayam; Lauren M Brinkac; Maureen J Beanan; Sean C Daugherty; Robert T Deboy; A Scott Durkin; James F Kolonay; Ramana Madupu; William C Nelson; Bola Ayodeji; Margaret Kraul; Jyoti Shetty; Joel Malek; Susan E Van Aken; Steven Riedmuller; Herve Tettelin; Steven R Gill; Owen White; Steven L Salzberg; David L Hoover; Luther E Lindler; Shirley M Halling; Stephen M Boyle; Claire M Fraser
Journal: Proc Natl Acad Sci U S A Date: 2002-09-23 Impact factor: 11.205

6. Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors: Heng Li; Richard Durbin
Journal: Bioinformatics Date: 2009-05-18 Impact factor: 6.937

7. Fast and accurate long-read alignment with Burrows-Wheeler transform.

Authors: Heng Li; Richard Durbin
Journal: Bioinformatics Date: 2010-01-15 Impact factor: 6.937

7 in total

1. Complete genome sequence of Brucella suis VBI22, isolated from bovine milk.

Authors: Hongseok Tae; Shamira Shallom; Robert Settlage; Gregory N Hawkins; L Garry Adams; Harold R Garner
Journal: J Bacteriol Date: 2012-02 Impact factor: 3.490

Review 2. Maintenance of multipartite genome system and its functional significance in bacteria.

Authors: Hari Sharan Misra; Ganesh Kumar Maurya; Swathi Kota; Vijaya Kumar Charaka
Journal: J Genet Date: 2018-09 Impact factor: 1.166

3. ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats.

Authors: Hongseok Tae; Kevin W McMahon; Robert E Settlage; Jasmin H Bavarva; Harold R Garner
Journal: Bioinformatics Date: 2013-05-15 Impact factor: 6.937

4. Improved variation calling via an iterative backbone remapping and local assembly method for bacterial genomes.

Authors: Hongseok Tae; Robert E Settlage; Shamira Shallom; Jasmin H Bavarva; Dale Preston; Gregory N Hawkins; L Garry Adams; Harold R Garner
Journal: Genomics Date: 2012-08-10 Impact factor: 5.736

5. Phylogenetic analysis of erythritol catabolic loci within the Rhizobiales and proteobacteria.

Authors: Barney A Geddes; Georg Hausner; Ivan J Oresnik
Journal: BMC Microbiol Date: 2013-02-23 Impact factor: 3.605

6. Comparative genomic analysis between newly sequenced Brucella suis Vaccine Strain S2 and the Virulent Brucella suis Strain 1330.

Authors: Dong-Dong Di; Hai Jiang; Li-Li Tian; Jing-Li Kang; Wen Zhang; Xin-Ping Yi; Feng Ye; Qi Zhong; Bo Ni; You-Yu He; Lin Xia; Yao Yu; Bu-Yun Cui; Xiang Mao; Wei-Xing Fan
Journal: BMC Genomics Date: 2016-09-20 Impact factor: 3.969

Review 7. Swine brucellosis: current perspectives.

Authors: S C Olsen; F M Tatum
Journal: Vet Med (Auckl) Date: 2016-12-20

7 in total