Literature DB >> 22035184

Simulation analysis of the temperature dependence of lignin structure and dynamics.

Loukas Petridis1, Roland Schulz, Jeremy C Smith.   

Abstract

Lignins are hydrophobic, branched polymers that regulate water conduction and provide protection against chemical and biological degradation in plant cell walls. Lignins also form a residual barrier to effective hydrolysis of plant biomass pretreated at elevated temperatures in cellulosic ethanol production. Here, the temperature-dependent structure and dynamics of individual softwood lignin polymers in aqueous solution are examined using extensive (17 μs) molecular dynamics simulations. With decreasing temperature the lignins are found to transition from mobile, extended to glassy, compact states. The polymers are composed of blobs, inside which the radius of gyration of a polymer segment is a power-law function of the number of monomers comprising it. In the low temperature states the blobs are interpermeable, the polymer does not conform to Zimm/Stockmayer theory, and branching does not lead to reduction of the polymer size, the radius of gyration being instead determined by shape anisotropy. At high temperatures the blobs become spatially separated leading to a fractal crumpled globule form. The low-temperature collapse is thermodynamically driven by the increase of the translational entropy and density fluctuations of water molecules removed from the hydration shell, thus distinguishing lignin collapse from enthalpically driven coil-globule polymer transitions and providing a thermodynamic role of hydration water density fluctuations in driving hydrophobic polymer collapse. Although hydrophobic, lignin is wetted, leading to locally enhanced chain dynamics of solvent-exposed monomers. The detailed characterization obtained here provides insight at atomic detail into processes relevant to biomass pretreatment for cellulosic ethanol production and general polymer coil-globule transition phenomena.
© 2011 American Chemical Society

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Year:  2011        PMID: 22035184     DOI: 10.1021/ja206839u

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Conformational analysis of lignin models: a chemometric approach.

Authors:  Eduardo W Castilho-Almeida; Wagner B De Almeida; Hélio F Dos Santos
Journal:  J Mol Model       Date:  2012-12-11       Impact factor: 1.810

2.  Initial recognition of a cellodextrin chain in the cellulose-binding tunnel may affect cellobiohydrolase directional specificity.

Authors:  Pavan K Ghattyvenkatakrishna; Emal M Alekozai; Gregg T Beckham; Roland Schulz; Michael F Crowley; Edward C Uberbacher; Xiaolin Cheng
Journal:  Biophys J       Date:  2013-02-19       Impact factor: 4.033

3.  Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation.

Authors:  Utsab R Shrestha; Puneet Juneja; Qiu Zhang; Viswanathan Gurumoorthy; Jose M Borreguero; Volker Urban; Xiaolin Cheng; Sai Venkatesh Pingali; Jeremy C Smith; Hugh M O'Neill; Loukas Petridis
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

4.  Highly selective generation of vanillin by anodic degradation of lignin: a combined approach of electrochemistry and product isolation by adsorption.

Authors:  Dominik Schmitt; Carolin Regenbrecht; Marius Hartmer; Florian Stecker; Siegfried R Waldvogel
Journal:  Beilstein J Org Chem       Date:  2015-04-13       Impact factor: 2.883

5.  The fate of lignin during hydrothermal pretreatment.

Authors:  Heather L Trajano; Nancy L Engle; Marcus Foston; Arthur J Ragauskas; Timothy J Tschaplinski; Charles E Wyman
Journal:  Biotechnol Biofuels       Date:  2013-08-01       Impact factor: 6.040

6.  Mechanism of lignin inhibition of enzymatic biomass deconstruction.

Authors:  Josh V Vermaas; Loukas Petridis; Xianghong Qi; Roland Schulz; Benjamin Lindner; Jeremy C Smith
Journal:  Biotechnol Biofuels       Date:  2015-12-21       Impact factor: 6.040

7.  Novel pathway to produce high molecular weight kraft lignin-acrylic acid polymers in acidic suspension systems.

Authors:  Fangong Kong; Shoujuan Wang; Weijue Gao; Pedram Fatehi
Journal:  RSC Adv       Date:  2018-03-29       Impact factor: 3.361

8.  Acetylated lignin nanoparticles as a possible vehicle for photosensitizing molecules.

Authors:  Guillaume Marchand; Gabin Fabre; Nidia Maldonado-Carmona; Nicolas Villandier; Stéphanie Leroy-Lhez
Journal:  Nanoscale Adv       Date:  2020-10-15

9.  On the solution structure of kraft lignin in ethylene glycol and its implication for nanoparticle preparation.

Authors:  Mingkun Yang; Wenwen Zhao; Seema Singh; Blake Simmons; Gang Cheng
Journal:  Nanoscale Adv       Date:  2018-09-06

Review 10.  Efficient Reaction Systems for Lignocellulosic Biomass Conversion to Furan Derivatives: A Minireview.

Authors:  Xiaofang Liu; Dayong Yu; Hangyu Luo; Can Li; Hu Li
Journal:  Polymers (Basel)       Date:  2022-09-04       Impact factor: 4.967

  10 in total

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