Literature DB >> 22034349

VisBricks: multiform visualization of large, inhomogeneous data.

Alexander Lex1, Hans-Jörg Schulz, Marc Streit, Christian Partl, Dieter Schmalstieg.   

Abstract

Large volumes of real-world data often exhibit inhomogeneities: vertically in the form of correlated or independent dimensions and horizontally in the form of clustered or scattered data items. In essence, these inhomogeneities form the patterns in the data that researchers are trying to find and understand. Sophisticated statistical methods are available to reveal these patterns, however, the visualization of their outcomes is mostly still performed in a one-view-fits-all manner. In contrast, our novel visualization approach, VisBricks, acknowledges the inhomogeneity of the data and the need for different visualizations that suit the individual characteristics of the different data subsets. The overall visualization of the entire data set is patched together from smaller visualizations, there is one VisBrick for each cluster in each group of interdependent dimensions. Whereas the total impression of all VisBricks together gives a comprehensive high-level overview of the different groups of data, each VisBrick independently shows the details of the group of data it represents. State-of-the-art brushing and visual linking between all VisBricks furthermore allows the comparison of the groupings and the distribution of data items among them. In this paper, we introduce the VisBricks visualization concept, discuss its design rationale and implementation, and demonstrate its usefulness by applying it to a use case from the field of biomedicine.
© 2011 IEEE

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Year:  2011        PMID: 22034349     DOI: 10.1109/TVCG.2011.250

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  10 in total

1.  StratomeX: Visual Analysis of Large-Scale Heterogeneous Genomics Data for Cancer Subtype Characterization.

Authors:  A Lex; M Streit; H-J Schulz; C Partl; D Schmalstieg; P J Park; N Gehlenborg
Journal:  Comput Graph Forum       Date:  2012-06-25       Impact factor: 2.078

2.  Domino: Extracting, Comparing, and Manipulating Subsets Across Multiple Tabular Datasets.

Authors:  Samuel Gratzl; Nils Gehlenborg; Alexander Lex; Hanspeter Pfister; Marc Streit
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

3.  Entourage: visualizing relationships between biological pathways using contextual subsets.

Authors:  Alexander Lex; Christian Partl; Denis Kalkofen; Marc Streit; Samuel Gratzl; Anne Mai Wassermann; Dieter Schmalstieg; Hanspeter Pfister
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-12       Impact factor: 4.579

4.  enRoute: dynamic path extraction from biological pathway maps for exploring heterogeneous experimental datasets.

Authors:  Christian Partl; Alexander Lex; Marc Streit; Denis Kalkofen; Karl Kashofer; Dieter Schmalstieg
Journal:  BMC Bioinformatics       Date:  2013-11-12       Impact factor: 3.169

5.  MediSyn: uncertainty-aware visualization of multiple biomedical datasets to support drug treatment selection.

Authors:  Chen He; Luana Micallef; Zia-Ur-Rehman Tanoli; Samuel Kaski; Tero Aittokallio; Giulio Jacucci
Journal:  BMC Bioinformatics       Date:  2017-09-13       Impact factor: 3.169

6.  Characterizing cancer subtypes using dual analysis in Caleydo StratomeX.

Authors:  Cagatay Turkay; Alexander Lex; Marc Streit; Hanspeter Pfister; Helwig Hauser
Journal:  IEEE Comput Graph Appl       Date:  2014 Mar-Apr       Impact factor: 2.088

7.  XCluSim: a visual analytics tool for interactively comparing multiple clustering results of bioinformatics data.

Authors:  Sehi L'Yi; Bongkyung Ko; DongHwa Shin; Young-Joon Cho; Jaeyong Lee; Bohyoung Kim; Jinwook Seo
Journal:  BMC Bioinformatics       Date:  2015-08-13       Impact factor: 3.169

8.  iGPSe: a visual analytic system for integrative genomic based cancer patient stratification.

Authors:  Hao Ding; Chao Wang; Kun Huang; Raghu Machiraju
Journal:  BMC Bioinformatics       Date:  2014-07-10       Impact factor: 3.169

9.  A richly interactive exploratory data analysis and visualization tool using electronic medical records.

Authors:  Chih-Wei Huang; Richard Lu; Usman Iqbal; Shen-Hsien Lin; Phung Anh Alex Nguyen; Hsuan-Chia Yang; Chun-Fu Wang; Jianping Li; Kwan-Liu Ma; Yu-Chuan Jack Li; Wen-Shan Jian
Journal:  BMC Med Inform Decis Mak       Date:  2015-11-12       Impact factor: 2.796

10.  Interactive visual exploration and refinement of cluster assignments.

Authors:  Michael Kern; Alexander Lex; Nils Gehlenborg; Chris R Johnson
Journal:  BMC Bioinformatics       Date:  2017-09-12       Impact factor: 3.169

  10 in total

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