Literature DB >> 22030861

Generation of a set of conditional analog-sensitive alleles of essential protein kinases in the fission yeast Schizosaccharomyces pombe.

Lubos Cipak1, Chao Zhang, Ines Kovacikova, Cornelia Rumpf, Eva Miadokova, Kevan M Shokat, Juraj Gregan.   

Abstract

The genome of the fission yeast Schizosaccharomyces pombe encodes for 17 protein kinases that are essential for viability. Studies of the essential kinases often require the use of mutant strains carrying conditional alleles. To inactivate these kinases conditionally, we applied a recently developed chemical genetic strategy. The mutation of a single residue in the ATP-binding pocket confers sensitivity to small-molecule inhibitors, allowing for specific inactivation of the modified kinase. Using this approach, we constructed conditional analog-sensitive alleles of 13 essential protein kinases in the fission yeast S. pombe.

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Year:  2011        PMID: 22030861      PMCID: PMC3266181          DOI: 10.4161/cc.10.20.17792

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  24 in total

1.  A second-site suppressor strategy for chemical genetic analysis of diverse protein kinases.

Authors:  Chao Zhang; Denise M Kenski; Jennifer L Paulson; Arale Bonshtien; Guido Sessa; Janet V Cross; Dennis J Templeton; Kevan M Shokat
Journal:  Nat Methods       Date:  2005-06       Impact factor: 28.547

Review 2.  Features of selective kinase inhibitors.

Authors:  Zachary A Knight; Kevan M Shokat
Journal:  Chem Biol       Date:  2005-06

3.  Recruitment of P-TEFb (Cdk9-Pch1) to chromatin by the cap-methyl transferase Pcm1 in fission yeast.

Authors:  Allan Guiguen; Julie Soutourina; Monique Dewez; Lionel Tafforeau; Marc Dieu; Martine Raes; Jean Vandenhaute; Michel Werner; Damien Hermand
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

Review 4.  Translational control of gene expression from transcripts to transcriptomes.

Authors:  Daniel H Lackner; Jürg Bähler
Journal:  Int Rev Cell Mol Biol       Date:  2008       Impact factor: 6.813

5.  Construction of conditional analog-sensitive kinase alleles in the fission yeast Schizosaccharomyces pombe.

Authors:  Juraj Gregan; Chao Zhang; Cornelia Rumpf; Lubos Cipak; Zhang Li; Pelin Uluocak; Kim Nasmyth; Kevan M Shokat
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 6.  Basic methods for fission yeast.

Authors:  Susan L Forsburg; Nicholas Rhind
Journal:  Yeast       Date:  2006-02       Impact factor: 3.239

7.  Chemical genetic analysis of the regulatory role of Cdc2p in the S. pombe septation initiation network.

Authors:  Sandra Dischinger; Andrea Krapp; Linfeng Xie; James R Paulson; Viesturs Simanis
Journal:  J Cell Sci       Date:  2008-02-26       Impact factor: 5.285

Review 8.  Post-transcriptional control of gene expression: a genome-wide perspective.

Authors:  Juan Mata; Samuel Marguerat; Jürg Bähler
Journal:  Trends Biochem Sci       Date:  2005-09       Impact factor: 13.807

9.  High-throughput knockout screen in fission yeast.

Authors:  Juraj Gregan; Peter K Rabitsch; Cornelia Rumpf; Maria Novatchkova; Alexander Schleiffer; Kim Nasmyth
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

10.  Aurora controls sister kinetochore mono-orientation and homolog bi-orientation in meiosis-I.

Authors:  Silke Hauf; Ashapurno Biswas; Maria Langegger; Shigehiro A Kawashima; Tatsuya Tsukahara; Yoshinori Watanabe
Journal:  EMBO J       Date:  2007-10-11       Impact factor: 11.598

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  20 in total

1.  Feedback regulation of SIN by Etd1 and Rho1 in fission yeast.

Authors:  María Alcaide-Gavilán; Aurelia Lahoz; Rafael R Daga; Juan Jimenez
Journal:  Genetics       Date:  2013-12-13       Impact factor: 4.562

Review 2.  Reactivity-based chemical-genetic study of protein kinases.

Authors:  Renata Rezende Miranda; Chao Zhang
Journal:  RSC Med Chem       Date:  2022-03-30

3.  Phosphoregulation of the cytokinetic protein Fic1 contributes to fission yeast growth polarity establishment.

Authors:  K Adam Bohnert; Anthony M Rossi; Quan-Wen Jin; Jun-Song Chen; Kathleen L Gould
Journal:  J Cell Sci       Date:  2020-09-17       Impact factor: 5.285

4.  Dissecting the first and the second meiotic divisions using a marker-less drug-hypersensitive fission yeast.

Authors:  Yuki Aoi; Masamitsu Sato; Takashi Sutani; Katsuhiko Shirahige; Tarun M Kapoor; Shigehiro A Kawashima
Journal:  Cell Cycle       Date:  2014-03-03       Impact factor: 4.534

5.  Structure-guided inhibitor design expands the scope of analog-sensitive kinase technology.

Authors:  Chao Zhang; Michael S Lopez; Arvin C Dar; Eva Ladow; Steven Finkbeiner; Cai-Hong Yun; Michael J Eck; Kevan M Shokat
Journal:  ACS Chem Biol       Date:  2013-07-23       Impact factor: 5.100

6.  A new tool for an old problem: synchronizing fission yeast cells during meiosis using an ATP analog-sensitive protein kinase.

Authors:  Jozef Nosek; L'ubomír Tomáska
Journal:  Cell Cycle       Date:  2012-05-01       Impact factor: 4.534

Review 7.  The final link: tapping the power of chemical genetics to connect the molecular and biologic functions of mitotic protein kinases.

Authors:  Robert F Lera; Mark E Burkard
Journal:  Molecules       Date:  2012-10-17       Impact factor: 4.411

8.  A knockout screen for protein kinases required for the proper meiotic segregation of chromosomes in the fission yeast Schizosaccharomyces pombe.

Authors:  Ines Kovacikova; Silvia Polakova; Zsigmond Benko; Lubos Cipak; Lijuan Zhang; Cornelia Rumpf; Eva Miadokova; Juraj Gregan
Journal:  Cell Cycle       Date:  2013-01-31       Impact factor: 4.534

9.  Crosstalk between casein kinase II and Ste20-related kinase Nak1.

Authors:  Lubos Cipak; Sneha Gupta; Iva Rajovic; Quan-Wen Jin; Dorothea Anrather; Gustav Ammerer; Dannel McCollum; Juraj Gregan
Journal:  Cell Cycle       Date:  2013-03-05       Impact factor: 4.534

10.  ATP analog-sensitive Pat1 protein kinase for synchronous fission yeast meiosis at physiological temperature.

Authors:  Lubos Cipak; Randy W Hyppa; Gerald R Smith; Juraj Gregan
Journal:  Cell Cycle       Date:  2012-04-15       Impact factor: 4.534

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