Literature DB >> 22030748

From DNA to targeted therapeutics: bringing synthetic biology to the clinic.

Yvonne Y Chen1, Christina D Smolke.   

Abstract

Synthetic biology aims to make biological engineering more scalable and predictable, lowering the cost and facilitating the translation of synthetic biological systems to practical applications. Increasingly sophisticated, rationally designed synthetic systems that are capable of complex functions pave the way to translational applications, including disease diagnostics and targeted therapeutics. Here, we provide an overview of recent developments in synthetic biology in the context of translational research and discuss challenges at the interface between synthetic biology and clinical medicine.

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Year:  2011        PMID: 22030748      PMCID: PMC3285276          DOI: 10.1126/scitranslmed.3002944

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  34 in total

Review 1.  Foundations for engineering biology.

Authors:  Drew Endy
Journal:  Nature       Date:  2005-11-24       Impact factor: 49.962

Review 2.  Next-generation optical technologies for illuminating genetically targeted brain circuits.

Authors:  Karl Deisseroth; Guoping Feng; Ania K Majewska; Gero Miesenböck; Alice Ting; Mark J Schnitzer
Journal:  J Neurosci       Date:  2006-10-11       Impact factor: 6.167

3.  Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly.

Authors:  David A Wright; Stacey Thibodeau-Beganny; Jeffry D Sander; Ronnie J Winfrey; Andrew S Hirsh; Magdalena Eichtinger; Fengli Fu; Matthew H Porteus; Drena Dobbs; Daniel F Voytas; J Keith Joung
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

4.  A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.

Authors:  Maung Nyan Win; Christina D Smolke
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-20       Impact factor: 11.205

5.  Refinement and standardization of synthetic biological parts and devices.

Authors:  Barry Canton; Anna Labno; Drew Endy
Journal:  Nat Biotechnol       Date:  2008-07       Impact factor: 54.908

6.  Multi-input RNAi-based logic circuit for identification of specific cancer cells.

Authors:  Zhen Xie; Liliana Wroblewska; Laura Prochazka; Ron Weiss; Yaakov Benenson
Journal:  Science       Date:  2011-09-02       Impact factor: 47.728

7.  In vitro and in vivo gene therapy vector evolution via multispecies interbreeding and retargeting of adeno-associated viruses.

Authors:  Dirk Grimm; Joyce S Lee; Lora Wang; Tushar Desai; Bassel Akache; Theresa A Storm; Mark A Kay
Journal:  J Virol       Date:  2008-04-09       Impact factor: 5.103

8.  A tunable genetic switch based on RNAi and repressor proteins for regulating gene expression in mammalian cells.

Authors:  Tara L Deans; Charles R Cantor; James J Collins
Journal:  Cell       Date:  2007-07-27       Impact factor: 41.582

9.  A mammalian microRNA expression atlas based on small RNA library sequencing.

Authors:  Pablo Landgraf; Mirabela Rusu; Robert Sheridan; Alain Sewer; Nicola Iovino; Alexei Aravin; Sébastien Pfeffer; Amanda Rice; Alice O Kamphorst; Markus Landthaler; Carolina Lin; Nicholas D Socci; Leandro Hermida; Valerio Fulci; Sabina Chiaretti; Robin Foà; Julia Schliwka; Uta Fuchs; Astrid Novosel; Roman-Ulrich Müller; Bernhard Schermer; Ute Bissels; Jason Inman; Quang Phan; Minchen Chien; David B Weir; Ruchi Choksi; Gabriella De Vita; Daniela Frezzetti; Hans-Ingo Trompeter; Veit Hornung; Grace Teng; Gunther Hartmann; Miklos Palkovits; Roberto Di Lauro; Peter Wernet; Giuseppe Macino; Charles E Rogler; James W Nagle; Jingyue Ju; F Nina Papavasiliou; Thomas Benzing; Peter Lichter; Wayne Tam; Michael J Brownstein; Andreas Bosio; Arndt Borkhardt; James J Russo; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

10.  Synthetic biology: new engineering rules for an emerging discipline.

Authors:  Ernesto Andrianantoandro; Subhayu Basu; David K Karig; Ron Weiss
Journal:  Mol Syst Biol       Date:  2006-05-16       Impact factor: 11.429

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  9 in total

1.  Engineering Escherichia coli for light-activated cytolysis of mammalian cells.

Authors:  Michael S Magaraci; Avin Veerakumar; Peter Qiao; Ashwin Amurthur; Justin Y Lee; Jordan S Miller; Mark Goulian; Casim A Sarkar
Journal:  ACS Synth Biol       Date:  2014-01-14       Impact factor: 5.110

2.  Regulating synthetic gene networks in 3D materials.

Authors:  Tara L Deans; Anirudha Singh; Matthew Gibson; Jennifer H Elisseeff
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-27       Impact factor: 11.205

3.  Regulation of T cell proliferation with drug-responsive microRNA switches.

Authors:  Remus S Wong; Yvonne Y Chen; Christina D Smolke
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

4.  Mapping the environmental fitness landscape of a synthetic gene circuit.

Authors:  Dmitry Nevozhay; Rhys M Adams; Elizabeth Van Itallie; Matthew R Bennett; Gábor Balázsi
Journal:  PLoS Comput Biol       Date:  2012-04-12       Impact factor: 4.475

5.  Spatial and functional heterogeneities shape collective behavior of tumor-immune networks.

Authors:  Daniel K Wells; Yishan Chuang; Louis M Knapp; Dirk Brockmann; William L Kath; Joshua N Leonard
Journal:  PLoS Comput Biol       Date:  2015-04-23       Impact factor: 4.475

6.  Systematic transfer of prokaryotic sensors and circuits to mammalian cells.

Authors:  Brynne C Stanton; Velia Siciliano; Amar Ghodasara; Liliana Wroblewska; Kevin Clancy; Axel C Trefzer; Jonathan D Chesnut; Ron Weiss; Christopher A Voigt
Journal:  ACS Synth Biol       Date:  2014-11-20       Impact factor: 5.110

Review 7.  Pathways to cellular supremacy in biocomputing.

Authors:  Lewis Grozinger; Martyn Amos; Thomas E Gorochowski; Pablo Carbonell; Diego A Oyarzún; Ruud Stoof; Harold Fellermann; Paolo Zuliani; Huseyin Tas; Angel Goñi-Moreno
Journal:  Nat Commun       Date:  2019-11-20       Impact factor: 14.919

8.  Synthetic mammalian trigger-controlled bipartite transcription factors.

Authors:  Marc Folcher; Mingqi Xie; Andrea Spinnler; Martin Fussenegger
Journal:  Nucleic Acids Res       Date:  2013-05-17       Impact factor: 16.971

9.  Synthetic Bax-Anti Bcl2 combination module actuated by super artificial hTERT promoter selectively inhibits malignant phenotypes of bladder cancer.

Authors:  Li Liu; Yuchen Liu; Tianbiao Zhang; Hanwei Wu; Muqi Lin; Chaoliang Wang; Yonghao Zhan; Qing Zhou; Baoping Qiao; Xiaojuan Sun; Qiaoxia Zhang; Xiaoqiang Guo; Guoping Zhao; Weixing Zhang; Weiren Huang
Journal:  J Exp Clin Cancer Res       Date:  2016-01-08
  9 in total

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