Literature DB >> 22020179

Unravelling the details of vitamin D photosynthesis by non-adiabatic molecular dynamics simulations.

Enrico Tapavicza1, Alexander M Meyer, Filipp Furche.   

Abstract

We investigate the photodynamics of vitamin D derivatives by a fully analytical implementation of the linear response time-dependent density functional theory surface hopping method (LR-TDDFT-SH). Our study elucidates the dynamics of the processes involved in vitamin D formation at the molecular level and with femtosecond resolution. We explain the major experimental findings and provide new insights that cannot directly be obtained from experiments: firstly, we investigate the dynamics of the photoinduced ring-opening of provitamin D (Pro) and cyclohexadiene (CHD) and the subsequent rotational isomerization. In agreement with recent experiments and CC2 calculations, only the bright S(1) state is involved in the ring-opening reaction. Our calculations confirm the experimentally reported 5 : 1 ratio between the excited state lifetimes of Pro and CHD. The longer lifetimes of Pro are attributed to steric constraints of the steroid skeleton and to temperature effects, both emerging directly from our simulations. For CHD and Pro, we present an explanation of the biexponential decay recently reported by Sension and coworkers [Tang et al., J. Phys. Chem., 2011, 134, 104503]: our calculations suggest that the fast and slow components arise from a reactive and an unreactive reaction pathway, respectively. Secondly, we assess the wavelength dependent photochemistry of previtamin D (Pre). Using replica exchange molecular dynamics we sample the Pre conformers present at thermal equilibrium. Based on this ensemble we explain the conformation dependent absorption and the essential features of Pre photochemistry. Consistent with the experiments, we find ring-closure to occur mostly after excitation of the cZc conformers and at lower energies, whereas Z/E isomerization of the central double bond preferably occurs after excitation at higher energies. For the isomerization we provide the first theoretical evidence of the proposed hula-twist mechanism. Our results show that LR-TDDFT-SH is a highly valuable tool for studying the photochemistry of moderately large systems, even though challenges remain in the vicinity of conical intersections.

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Year:  2011        PMID: 22020179     DOI: 10.1039/c1cp21292c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  8 in total

1.  Sensing ultrashort electronic coherent beating at conical intersections by single-electron pulses.

Authors:  Shahaf Asban; Daniel Keefer; Vladimir Y Chernyak; Shaul Mukamel
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-24       Impact factor: 12.779

2.  First-Principles Prediction of Wavelength-Dependent Product Quantum Yields.

Authors:  Travis Thompson; Enrico Tapavicza
Journal:  J Phys Chem Lett       Date:  2018-08-07       Impact factor: 6.475

3.  TURBOMOLE: Modular program suite for ab initio quantum-chemical and condensed-matter simulations.

Authors:  Sree Ganesh Balasubramani; Guo P Chen; Sonia Coriani; Michael Diedenhofen; Marius S Frank; Yannick J Franzke; Filipp Furche; Robin Grotjahn; Michael E Harding; Christof Hättig; Arnim Hellweg; Benjamin Helmich-Paris; Christof Holzer; Uwe Huniar; Martin Kaupp; Alireza Marefat Khah; Sarah Karbalaei Khani; Thomas Müller; Fabian Mack; Brian D Nguyen; Shane M Parker; Eva Perlt; Dmitrij Rappoport; Kevin Reiter; Saswata Roy; Matthias Rückert; Gunnar Schmitz; Marek Sierka; Enrico Tapavicza; David P Tew; Christoph van Wüllen; Vamsee K Voora; Florian Weigend; Artur Wodyński; Jason M Yu
Journal:  J Chem Phys       Date:  2020-05-14       Impact factor: 3.488

4.  Time resolved photoelectron spectroscopy of thioflavin T photoisomerization: a simulation study.

Authors:  Hao Ren; Benjamin P Fingerhut; Shaul Mukamel
Journal:  J Phys Chem A       Date:  2013-04-29       Impact factor: 2.781

5.  Tuning the photoreactivity of Z-hexatriene photoswitches by substituents - a non-adiabatic molecular dynamics study.

Authors:  Enrico Tapavicza; Travis Thompson; Kenneth Redd; Dan Kim
Journal:  Phys Chem Chem Phys       Date:  2018-10-03       Impact factor: 3.676

6.  Photoinduced Changes in Aromaticity Facilitate Electrocyclization of Dithienylbenzene Switches.

Authors:  Baswanth Oruganti; Péter Pál Kalapos; Varada Bhargav; Gábor London; Bo Durbeej
Journal:  J Am Chem Soc       Date:  2020-07-28       Impact factor: 15.419

7.  Modulating the Photocyclization Reactivity of Diarylethenes through Changes in the Excited-State Aromaticity of the π-Linker.

Authors:  Baswanth Oruganti; Jun Wang; Bo Durbeej
Journal:  J Org Chem       Date:  2022-08-23       Impact factor: 4.198

Review 8.  Antitumor Profile of Carbon-Bridged Steroids (CBS) and Triterpenoids.

Authors:  Valery M Dembitsky; Tatyana A Gloriozova; Vladimir V Poroikov
Journal:  Mar Drugs       Date:  2021-06-03       Impact factor: 5.118

  8 in total

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