Literature DB >> 22013070

Assembly of preactivation complex for urease maturation in Helicobacter pylori: crystal structure of UreF-UreH protein complex.

Yu Hang Fong1, Ho Chun Wong, Chi Pang Chuck, Yu Wai Chen, Hongzhe Sun, Kam-Bo Wong.   

Abstract

Colonization of Helicobacter pylori in the acidic environment of the human stomach depends on the neutralizing activity of urease. Activation of apo-urease involves carboxylation of lysine 219 and insertion of two nickel ions. In H. pylori, this maturation process involves four urease accessory proteins as follows: UreE, UreF, UreG, and UreH. It is postulated that the apo-urease interacts with UreF, UreG, and UreH to form a pre-activation complex that undergoes GTP-dependent activation of urease. The crystal structure of the UreF-UreH complex reveals conformational changes in two distinct regions of UreF upon complex formation. First, the flexible C-terminal residues of UreF become ordered, forming an extra helix α10 and a loop structure stabilized by hydrogen bonds involving Arg-250. Second, the first turn of helix α2 uncoils to expose a conserved residue, Tyr-48. Substitution of R250A or Y48A in UreF abolishes the formation of the heterotrimeric complex of UreG-UreF-UreH and abolishes urease maturation. Our results suggest that the C-terminal residues and helix α2 of UreF are essential for the recruitment of UreG for the formation of the pre-activation complex. The molecular mass of the UreF-UreH complex determined by static light scattering was 116 ± 2.3 kDa, which is consistent with the quaternary structure of a dimer of heterodimers observed in the crystal structure. Taking advantage of the unique 2-fold symmetry observed in both the crystal structures of H. pylori urease and the UreF-UreH complex, we proposed a topology model of the pre-activation complex for urease maturation.

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Year:  2011        PMID: 22013070      PMCID: PMC3234868          DOI: 10.1074/jbc.M111.296830

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  41 in total

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3.  Characterization of the Klebsiella aerogenes urease accessory protein UreD in fusion with the maltose binding protein.

Authors:  Eric L Carter; Robert P Hausinger
Journal:  J Bacteriol       Date:  2010-03-05       Impact factor: 3.490

4.  Automated MAD and MIR structure solution.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 6.  Interplay of metal ions and urease.

Authors:  Eric L Carter; Nicholas Flugga; Jodi L Boer; Scott B Mulrooney; Robert P Hausinger
Journal:  Metallomics       Date:  2009       Impact factor: 4.526

7.  ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures.

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8.  MolProbity: all-atom structure validation for macromolecular crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

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Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  18 in total

1.  Zinc starvation response in a cyanobacterium revealed.

Authors:  Dietrich H Nies
Journal:  J Bacteriol       Date:  2012-03-02       Impact factor: 3.490

2.  Intrinsic disorder and metal binding in UreG proteins from Archae hyperthermophiles: GTPase enzymes involved in the activation of Ni(II) dependent urease.

Authors:  Manfredi Miraula; Stefano Ciurli; Barbara Zambelli
Journal:  J Biol Inorg Chem       Date:  2015-04-07       Impact factor: 3.358

3.  Klebsiella aerogenes UreF: identification of the UreG binding site and role in enhancing the fidelity of urease activation.

Authors:  Jodi L Boer; Robert P Hausinger
Journal:  Biochemistry       Date:  2012-03-06       Impact factor: 3.162

4.  Structure of the UreD-UreF-UreG-UreE complex in Helicobacter pylori: a model study.

Authors:  Francesco Biagi; Francesco Musiani; Stefano Ciurli
Journal:  J Biol Inorg Chem       Date:  2013-05-10       Impact factor: 3.358

5.  ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses.

Authors:  Ming-Yan Cheung; Xiaorong Li; Rui Miao; Yu-Hang Fong; Kwan-Pok Li; Yuk-Lin Yung; Mei-Hui Yu; Kam-Bo Wong; Zhongzhou Chen; Hon-Ming Lam
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-24       Impact factor: 11.205

6.  Structural insights into how GTP-dependent conformational changes in a metallochaperone UreG facilitate urease maturation.

Authors:  Man Hon Yuen; Yu Hang Fong; Yap Shing Nim; Pak Ho Lau; Kam-Bo Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-04       Impact factor: 11.205

Review 7.  Biosynthesis of the urease metallocenter.

Authors:  Mark A Farrugia; Lee Macomber; Robert P Hausinger
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

8.  Site-directed Mutagenesis Shows the Significance of Interactions with Phospholipids and the G-protein OsYchF1 for the Physiological Functions of the Rice GTPase-activating Protein 1 (OsGAP1).

Authors:  Yuk-Lin Yung; Ming-Yan Cheung; Rui Miao; Yu-Hang Fong; Kwan-Pok Li; Mei-Hui Yu; Mee-Len Chye; Kam-Bo Wong; Hon-Ming Lam
Journal:  J Biol Chem       Date:  2015-08-18       Impact factor: 5.157

9.  Nickel binding properties of Helicobacter pylori UreF, an accessory protein in the nickel-based activation of urease.

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Review 10.  Nickel trafficking system responsible for urease maturation in Helicobacter pylori.

Authors:  Rui-Guang Ge; Dong-Xian Wang; Ming-Cong Hao; Xue-Song Sun
Journal:  World J Gastroenterol       Date:  2013-12-07       Impact factor: 5.742

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