Literature DB >> 22012022

High-yield expression in Escherichia coli and purification of mouse ubiquitin-activating enzyme E1.

Andreia F Carvalho1, Manuel P Pinto, Cláudia P Grou, Rui Vitorino, Pedro Domingues, Fumiaki Yamao, Clara Sá-Miranda, Jorge E Azevedo.   

Abstract

Research in the ubiquitin field requires large amounts of ubiquitin-activating enzyme (E1) for in vitro ubiquitination assays. Typically, the mammalian enzyme is either isolated from natural sources or produced recombinantly using baculovirus/insect cell protein expression systems. Escherichia coli is seldom used to produce mammalian E1 probably due to the instability and insolubility of this high-molecular mass protein. In this report, we show that 5-10 mg of histidine-tagged mouse E1 can be easily obtained from a 1 l E. coli culture. A low temperature during the protein induction step was found to be critical to obtain an active enzyme.

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Year:  2012        PMID: 22012022     DOI: 10.1007/s12033-011-9463-x

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  28 in total

Review 1.  Ubiquitin: structures, functions, mechanisms.

Authors:  Cecile M Pickart; Michael J Eddins
Journal:  Biochim Biophys Acta       Date:  2004-11-29

2.  A UbcH5/ubiquitin noncovalent complex is required for processive BRCA1-directed ubiquitination.

Authors:  Peter S Brzovic; Alexei Lissounov; Devin E Christensen; David W Hoyt; Rachel E Klevit
Journal:  Mol Cell       Date:  2006-03-17       Impact factor: 17.970

3.  Ubiquitination of mammalian Pex5p, the peroxisomal import receptor.

Authors:  Andreia F Carvalho; Manuel P Pinto; Cláudia P Grou; Inês S Alencastre; Marc Fransen; Clara Sá-Miranda; Jorge E Azevedo
Journal:  J Biol Chem       Date:  2007-08-28       Impact factor: 5.157

Review 4.  The peroxisomal protein import machinery--a case report of transient ubiquitination with a new flavor.

Authors:  C P Grou; A F Carvalho; M P Pinto; I S Alencastre; T A Rodrigues; M O Freitas; T Francisco; C Sá-Miranda; J E Azevedo
Journal:  Cell Mol Life Sci       Date:  2009-01       Impact factor: 9.261

5.  Cloning of human ubiquitin-conjugating enzymes UbcH6 and UbcH7 (E2-F1) and characterization of their interaction with E6-AP and RSP5.

Authors:  U Nuber; S Schwarz; P Kaiser; R Schneider; M Scheffner
Journal:  J Biol Chem       Date:  1996-02-02       Impact factor: 5.157

6.  Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor.

Authors:  Cláudia P Grou; Andreia F Carvalho; Manuel P Pinto; Sebastian Wiese; Heike Piechura; Helmut E Meyer; Bettina Warscheid; Clara Sá-Miranda; Jorge E Azevedo
Journal:  J Biol Chem       Date:  2008-03-22       Impact factor: 5.157

7.  Synthesis of free and proliferating cell nuclear antigen-bound polyubiquitin chains by the RING E3 ubiquitin ligase Rad5.

Authors:  Candice M Carlile; Cecile M Pickart; Michael J Matunis; Robert E Cohen
Journal:  J Biol Chem       Date:  2009-08-25       Impact factor: 5.157

Review 8.  Targeting proteins for destruction by the ubiquitin system: implications for human pathobiology.

Authors:  Alan L Schwartz; Aaron Ciechanover
Journal:  Annu Rev Pharmacol Toxicol       Date:  2009       Impact factor: 13.820

9.  NEDD8: a new ataxin-3 interactor.

Authors:  Anabela Ferro; Ana Luísa Carvalho; Andreia Teixeira-Castro; Carla Almeida; Ricardo J Tomé; Luísa Cortes; Ana-João Rodrigues; Elsa Logarinho; Jorge Sequeiros; Sandra Macedo-Ribeiro; Patrícia Maciel
Journal:  Biochim Biophys Acta       Date:  2007-08-24

10.  Activation of the heat-stable polypeptide of the ATP-dependent proteolytic system.

Authors:  A Ciechanover; H Heller; R Katz-Etzion; A Hershko
Journal:  Proc Natl Acad Sci U S A       Date:  1981-02       Impact factor: 11.205

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  22 in total

1.  Covalent Inhibition of Ubc13 Affects Ubiquitin Signaling and Reveals Active Site Elements Important for Targeting.

Authors:  Curtis D Hodge; Ross A Edwards; Craig J Markin; Darin McDonald; Mary Pulvino; Michael S Y Huen; Jiyong Zhao; Leo Spyracopoulos; Michael J Hendzel; J N Mark Glover
Journal:  ACS Chem Biol       Date:  2015-05-01       Impact factor: 5.100

2.  The 26S Proteasome Utilizes a Kinetic Gateway to Prioritize Substrate Degradation.

Authors:  Jared A M Bard; Charlene Bashore; Ken C Dong; Andreas Martin
Journal:  Cell       Date:  2019-03-28       Impact factor: 41.582

3.  Identification of ubiquitin-specific protease 9X (USP9X) as a deubiquitinase acting on ubiquitin-peroxin 5 (PEX5) thioester conjugate.

Authors:  Cláudia P Grou; Tânia Francisco; Tony A Rodrigues; Marta O Freitas; Manuel P Pinto; Andreia F Carvalho; Pedro Domingues; Stephen A Wood; José E Rodríguez-Borges; Clara Sá-Miranda; Marc Fransen; Jorge E Azevedo
Journal:  J Biol Chem       Date:  2012-02-27       Impact factor: 5.157

4.  Substrate Ubiquitination Controls the Unfolding Ability of the Proteasome.

Authors:  Eden L Reichard; Giavanna G Chirico; William J Dewey; Nicholas D Nassif; Katelyn E Bard; Nickolas E Millas; Daniel A Kraut
Journal:  J Biol Chem       Date:  2016-07-12       Impact factor: 5.157

5.  RNF8 E3 Ubiquitin Ligase Stimulates Ubc13 E2 Conjugating Activity That Is Essential for DNA Double Strand Break Signaling and BRCA1 Tumor Suppressor Recruitment.

Authors:  Curtis D Hodge; Ismail H Ismail; Ross A Edwards; Greg L Hura; Andrew T Xiao; John A Tainer; Michael J Hendzel; J N Mark Glover
Journal:  J Biol Chem       Date:  2016-02-22       Impact factor: 5.157

6.  Ubiquitination of disease-causing CFTR variants in a microsome-based assay.

Authors:  Samuel K Estabrooks; Jeffrey L Brodsky
Journal:  Anal Biochem       Date:  2020-07-01       Impact factor: 3.365

7.  PEX5 translocation into and out of peroxisomes drives matrix protein import.

Authors:  Michael L Skowyra; Tom A Rapoport
Journal:  Mol Cell       Date:  2022-08-04       Impact factor: 19.328

8.  Ubiquitin- and ATP-dependent unfoldase activity of P97/VCP•NPLOC4•UFD1L is enhanced by a mutation that causes multisystem proteinopathy.

Authors:  Emily E Blythe; Kristine C Olson; Vincent Chau; Raymond J Deshaies
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-16       Impact factor: 11.205

9.  A Rapid and Versatile Method for Generating Proteins with Defined Ubiquitin Chains.

Authors:  Kirby Martinez-Fonts; Andreas Matouschek
Journal:  Biochemistry       Date:  2016-03-17       Impact factor: 3.162

10.  Ubiquitin Modulates Liquid-Liquid Phase Separation of UBQLN2 via Disruption of Multivalent Interactions.

Authors:  Thuy P Dao; Regina-Maria Kolaitis; Hong Joo Kim; Kevin O'Donovan; Brian Martyniak; Erica Colicino; Heidi Hehnly; J Paul Taylor; Carlos A Castañeda
Journal:  Mol Cell       Date:  2018-03-08       Impact factor: 17.970

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