Literature DB >> 22005521

Phosphatase and tensin homolog (PTEN) pseudogene expression in endometrial cancer: a conserved regulatory mechanism important in tumorigenesis?

Yevgeniya J Ioffe1, Katherine B Chiappinelli, David G Mutch, Israel Zighelboim, Paul J Goodfellow.   

Abstract

OBJECTIVES: The PTEN pseudogene, PTENP1, was recently shown to play a role in cell proliferation in a prostate cancer model. In the present study, we sought to determine whether PTENP1 is expressed in endometrial cancer (EMCA) cell lines and primary tumors along with the microRNAs (miRNAs) that are predicted to regulate PTEN and PTENP1 transcript levels.
METHODS: RNA was prepared from six EMCA cell lines, three normal endometrial samples, and 61 primary tumors. TaqMan® RT-PCR was used to quantitate PTEN expression in all specimens and PTENP1 expression in cell lines, and normal endometrial (NE) samples. PTENP1 expression was evaluated using conventional RT-PCR in primary tumors. MicroRNA profiling was undertaken using NanoString(TM) technology in AN3CA and KLE cell lines. The relationship between PTEN transcript levels, PTENP1 expression, and PTEN mutation status was investigated.
RESULTS: All NE samples, cell lines, and primary tumors expressed PTEN. PTENP1 transcript was expressed in NE, cell lines, and 34/61 (56%) primary tumors. The median relative PTEN level was 2.9 arbitrary expression units in PTENP1-positive tumors and 2.3 in PTENP1-negative tumors (p=0.09). PTEN levels in wild-type and haploinsufficient tumors were variable compared to PTEN-null tumors (p=0.015). Four microRNAs predicted to bind PTEN/PTENP1 ranked in the top 20 most abundant microRNA subtypes in the AN3CA and KLE cell lines.
CONCLUSIONS: PTENP1 is expressed in NE and EMCA cell lines, as are PTEN/PTENP1 targeting inhibitory miRNAs (cell lines). Further studies are needed to evaluate the impact of PTEN/PTENP1/miRNA interactions on tumorigenesis regulation in EMCA.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22005521      PMCID: PMC3954782          DOI: 10.1016/j.ygyno.2011.10.011

Source DB:  PubMed          Journal:  Gynecol Oncol        ISSN: 0090-8258            Impact factor:   5.482


  36 in total

1.  An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene.

Authors:  Shinji Hirotsune; Noriyuki Yoshida; Amy Chen; Lisa Garrett; Fumihiro Sugiyama; Satoru Takahashi; Ken-ichi Yagami; Anthony Wynshaw-Boris; Atsushi Yoshiki
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

Review 2.  Comparative analysis of processed pseudogenes in the mouse and human genomes.

Authors:  Zhaolei Zhang; Nick Carriero; Mark Gerstein
Journal:  Trends Genet       Date:  2004-02       Impact factor: 11.639

3.  Cell-specific conditional deletion of Pten in the uterus results in differential phenotypes.

Authors:  Takiko Daikoku; Lindsey Jackson; Valérie Besnard; Jeffrey Whitsett; Lora Hedrick Ellenson; Sudhansu K Dey
Journal:  Gynecol Oncol       Date:  2011-05-13       Impact factor: 5.482

4.  Endometrial carcinoma of uterus masculinus (prostatic utricle). Report of 6 cases.

Authors:  M M Melicow; M Tannenbaum
Journal:  J Urol       Date:  1971-12       Impact factor: 7.450

5.  Endometrial carcinoma of the prostatic utricle: a tumor of prostatic origin.

Authors:  M M Walther; V Nassar; R C Harruff; B B Mann; D P Finnerty; K O Hewen-Lowe
Journal:  J Urol       Date:  1985-10       Impact factor: 7.450

Review 6.  Mutational spectra of PTEN/MMAC1 gene: a tumor suppressor with lipid phosphatase activity.

Authors:  I U Ali; L M Schriml; M Dean
Journal:  J Natl Cancer Inst       Date:  1999-11-17       Impact factor: 13.506

7.  PTEN methylation is associated with advanced stage and microsatellite instability in endometrial carcinoma.

Authors:  H B Salvesen; N MacDonald; A Ryan; I J Jacobs; E D Lynch; L A Akslen; S Das
Journal:  Int J Cancer       Date:  2001-01-01       Impact factor: 7.396

8.  Analysis of genetic and epigenetic alterations of the PTEN gene in gastric cancer.

Authors:  Kiyoshi Sato; Gen Tamura; Takashi Tsuchiya; Yasushi Endoh; Ken Sakata; Teiichi Motoyama; Osamu Usuba; Wataru Kimura; Masanori Terashima; Satoshi Nishizuka; Tongtong Zou; Stephen J Meltzer
Journal:  Virchows Arch       Date:  2002-02       Impact factor: 4.064

9.  PTEN, a putative protein tyrosine phosphatase gene mutated in human brain, breast, and prostate cancer.

Authors:  J Li; C Yen; D Liaw; K Podsypanina; S Bose; S I Wang; J Puc; C Miliaresis; L Rodgers; R McCombie; S H Bigner; B C Giovanella; M Ittmann; B Tycko; H Hibshoosh; M H Wigler; R Parsons
Journal:  Science       Date:  1997-03-28       Impact factor: 47.728

10.  Endometrial carcinoma of prostate.

Authors:  S Das
Journal:  Urology       Date:  1986-06       Impact factor: 2.649

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  16 in total

1.  The CLRX.1/NOD24 (NLRP2P) pseudogene codes a functional negative regulator of NF-κB, pyrin-only protein 4.

Authors:  K A Porter; E B Duffy; P Nyland; M K Atianand; H Sharifi; J A Harton
Journal:  Genes Immun       Date:  2014-05-29       Impact factor: 2.676

2.  Pseudogene PTENP1 functions as a competing endogenous RNA to suppress clear-cell renal cell carcinoma progression.

Authors:  Gan Yu; Weimin Yao; Kiranmai Gumireddy; Anping Li; Ji Wang; Wei Xiao; Ke Chen; Haibing Xiao; Heng Li; Kun Tang; Zhangqun Ye; Qihong Huang; Hua Xu
Journal:  Mol Cancer Ther       Date:  2014-09-23       Impact factor: 6.261

3.  A reinvestigation of somatic hypermethylation at the PTEN CpG island in cancer cell lines.

Authors:  Luke B Hesson; Deborah Packham; Emily Pontzer; Pauline Funchain; Charis Eng; Robyn L Ward
Journal:  Biol Proced Online       Date:  2012-04-10       Impact factor: 3.244

Review 4.  The Complex Landscape of PTEN mRNA Regulation.

Authors:  Erin Sellars; Martino Gabra; Leonardo Salmena
Journal:  Cold Spring Harb Perspect Med       Date:  2020-06-01       Impact factor: 5.159

Review 5.  The Role of PARP Inhibitors in the Treatment of Gynecologic Malignancies.

Authors:  Raquel E Reinbolt; John L Hays
Journal:  Front Oncol       Date:  2013-10-01       Impact factor: 6.244

6.  The importance of distinguishing pseudogenes from parental genes.

Authors:  Luke B Hesson; Robyn L Ward
Journal:  Clin Epigenetics       Date:  2014-12-31       Impact factor: 6.551

7.  Decreased expression of pseudogene PTENP1 promotes malignant behaviours and is associated with the poor survival of patients with HNSCC.

Authors:  Jiannan Liu; Yue Xing; Liqun Xu; Wantao Chen; Wei Cao; Chenping Zhang
Journal:  Sci Rep       Date:  2017-01-23       Impact factor: 4.379

8.  Polymorphisms in lncRNA PTENP1 and the Risk of Gastric Cancer in a Chinese Population.

Authors:  Yugang Ge; Yu He; Mingkun Jiang; Dakui Luo; Xiangkun Huan; Weizhi Wang; Diancai Zhang; Li Yang; Jundong Zhou
Journal:  Dis Markers       Date:  2017-08-28       Impact factor: 3.434

9.  In vivo NCL targeting affects breast cancer aggressiveness through miRNA regulation.

Authors:  Flavia Pichiorri; Dario Palmieri; Luciana De Luca; Jessica Consiglio; Jia You; Alberto Rocci; Tiffany Talabere; Claudia Piovan; Alessandro Lagana; Luciano Cascione; Jingwen Guan; Pierluigi Gasparini; Veronica Balatti; Gerard Nuovo; Vincenzo Coppola; Craig C Hofmeister; Guido Marcucci; John C Byrd; Stefano Volinia; Charles L Shapiro; Michael A Freitas; Carlo M Croce
Journal:  J Exp Med       Date:  2013-04-22       Impact factor: 17.579

Review 10.  Pseudogenes in Human Cancer.

Authors:  Laura Poliseno; Andrea Marranci; Pier Paolo Pandolfi
Journal:  Front Med (Lausanne)       Date:  2015-09-25
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