Literature DB >> 22003414

Spline-based models for predictiveness curves and surfaces.

Debashis Ghosh1, Michael Sabel.   

Abstract

A biomarker is defined to be a biological characteristic that is objectively measured and evaluated as an indicator of normal biologic processes, pathogenic processes, or pharmacologic responses to a therapeutic intervention. The use of biomarkers in cancer has been advocated for a variety of purposes, which include use as surrogate endpoints, early detection of disease, proxies for environmental exposure and risk prediction. We deal with the latter issue in this paper.Several authors have proposed use of the predictiveness curve for assessing the capacity of a biomarker for risk prediction. For most situations, it is reasonable to assume monotonicity of the biomarker effects on disease risk. In this article, we propose the use of flexible modelling of the predictiveness curve and its bivariate analogue, the predictiveness surface, through the use of spline algorithms that incorporate the appropriate monotonicity constraints. Estimation proceeds through use of a two-step algorithm that represents the "smooth, then monotonize" approach. Subsampling procedures are used for inference. The methods are illustrated to data from a melanoma study.

Entities:  

Year:  2010        PMID: 22003414      PMCID: PMC3193347          DOI: 10.4310/sii.2010.v3.n4.a3

Source DB:  PubMed          Journal:  Stat Interface        ISSN: 1938-7989            Impact factor:   0.582


  4 in total

1.  Mitotic rate and younger age are predictors of sentinel lymph node positivity: lessons learned from the generation of a probabilistic model.

Authors:  Vernon K Sondak; Jeremy M G Taylor; Michael S Sabel; Yue Wang; Lori Lowe; Amelia C Grover; Alfred E Chang; Alan M Yahanda; James Moon; Timothy M Johnson
Journal:  Ann Surg Oncol       Date:  2004-03       Impact factor: 5.344

2.  Incorporating monotonicity into the evaluation of a biomarker.

Authors:  Debashis Ghosh
Journal:  Biostatistics       Date:  2006-08-11       Impact factor: 5.899

3.  Evaluating the predictiveness of a continuous marker.

Authors:  Ying Huang; Margaret Sullivan Pepe; Ziding Feng
Journal:  Biometrics       Date:  2007-05-08       Impact factor: 2.571

4.  Evaluating candidate principal surrogate endpoints.

Authors:  Peter B Gilbert; Michael G Hudgens
Journal:  Biometrics       Date:  2008-03-24       Impact factor: 2.571

  4 in total
  1 in total

1.  Partial summary measures of the predictiveness curve.

Authors:  Michael C Sachs; Xiao-Hua Zhou
Journal:  Biom J       Date:  2013-03-18       Impact factor: 2.207

  1 in total

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