Literature DB >> 21990180

Functional characterization of splicing and ligand-binding domain variants in the LDL receptor.

Aitor Etxebarria1, Lourdes Palacios, Marianne Stef, Diego Tejedor, Kepa B Uribe, Amalia Oleaga, Luis Irigoyen, Beatriz Torres, Helena Ostolaza, Cesar Martin.   

Abstract

Familial hypercholesterolemia (FH) is an autosomal dominant disorder mostly caused by mutations in the LDLR gene. Although the detection of functional mutations in the LDLR gene provides an unequivocal diagnosis of the FH condition, there are many variants whose pathogenicity is still unknown. The aims of this study were to set up a rapid method to determine the effect of LDLR mutations, thereby providing an accurate diagnosis of FH, and to functionally characterize six LDLR mutations detected at high frequency by the LIPOchip(®) platform (Progenika Biopharma, Spain) in the Spanish population. LDLR expression and activity were analyzed by one-single-step flow cytometry assay and confocal microscopy. Splicing effects were determined by sequencing reverse transcription polymerase chain reaction products. The analysis of three heterozygous variants with a single point mutation within the low-density lipoprotein binding domain allowed us to classify the c.806G>A variant as nonpathogenic, and c.862G>A and c.895G>A variants as causative of FH. The results obtained for three variants affecting donor splice sites of the LDLR mRNA, c.313+2dupT, c.1186+5G>A, and c.1845+1G>C, demonstrated that these mutations are pathogenic. These results expand our knowledge of mutations responsible for FH, providing an accurate diagnosis and leading to early treatment to reduce the risk of premature cardiovascular events.
© 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 21990180     DOI: 10.1002/humu.21630

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  15 in total

1.  The importance of an integrated analysis of clinical, molecular, and functional data for the genetic diagnosis of familial hypercholesterolemia.

Authors:  Asier Benito-Vicente; Ana Catarina Alves; Aitor Etxebarria; Ana Medeiros Medeiros; Cesar Martin; Mafalda Bourbon
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

2.  Identification of the gene defect responsible for severe hypercholesterolaemia using whole-exome sequencing.

Authors:  Li-Yuan Sun; Yong-Biao Zhang; Long Jiang; Ning Wan; Wen-Feng Wu; Xiao-Dong Pan; Jun Yu; Feng Zhang; Lu-Ya Wang
Journal:  Sci Rep       Date:  2015-06-16       Impact factor: 4.379

3.  Familial hypercholesterolemia: Molecular characterization of possible cases from the Azores Islands (Portugal).

Authors:  Teresa Cymbron; Patrícia Mendes; Amanda Ramos; Mafalda Raposo; Nadiya Kazachkova; Ana Margarida Medeiros; Jácome Bruges-Armas; Mafalda Bourbon; Manuela Lima
Journal:  Meta Gene       Date:  2014-09-14

4.  Advantages and versatility of fluorescence-based methodology to characterize the functionality of LDLR and class mutation assignment.

Authors:  Aitor Etxebarria; Asier Benito-Vicente; Ana C Alves; Helena Ostolaza; Mafalda Bourbon; Cesar Martin
Journal:  PLoS One       Date:  2014-11-11       Impact factor: 3.240

5.  The UCL low-density lipoprotein receptor gene variant database: pathogenicity update.

Authors:  Sarah Leigh; Marta Futema; Ros Whittall; Alison Taylor-Beadling; Maggie Williams; Johan T den Dunnen; Steve E Humphries
Journal:  J Med Genet       Date:  2016-11-07       Impact factor: 6.318

Review 6.  Validation of LDLr Activity as a Tool to Improve Genetic Diagnosis of Familial Hypercholesterolemia: A Retrospective on Functional Characterization of LDLr Variants.

Authors:  Asier Benito-Vicente; Kepa B Uribe; Shifa Jebari; Unai Galicia-Garcia; Helena Ostolaza; Cesar Martin
Journal:  Int J Mol Sci       Date:  2018-06-05       Impact factor: 5.923

7.  Analysis of publicly available LDLR, APOB, and PCSK9 variants associated with familial hypercholesterolemia: application of ACMG guidelines and implications for familial hypercholesterolemia diagnosis.

Authors:  Joana Rita Chora; Ana Margarida Medeiros; Ana Catarina Alves; Mafalda Bourbon
Journal:  Genet Med       Date:  2017-10-26       Impact factor: 8.822

8.  Role of genetic changes in the progression of cardiovascular diseases.

Authors:  S A Sheweita; H Baghdadi; A R Allam
Journal:  Int J Biomed Sci       Date:  2011-12

9.  Exome Sequencing in a Family Identifies RECQL5 Mutation Resulting in Early Myocardial Infarction.

Authors:  Xiang Xie; Ying-Ying Zheng; Dilare Adi; Yi-Ning Yang; Yi-Tong Ma; Xiao-Mei Li; Zhen-Yan Fu; Xiang Ma; Fen Liu; Zi-Xiang Yu; You Chen; Ying Huang
Journal:  Medicine (Baltimore)       Date:  2016-02       Impact factor: 1.889

10.  Structural analysis of APOB variants, p.(Arg3527Gln), p.(Arg1164Thr) and p.(Gln4494del), causing Familial Hypercholesterolaemia provides novel insights into variant pathogenicity.

Authors:  J A Fernández-Higuero; A Etxebarria; A Benito-Vicente; A C Alves; J L R Arrondo; H Ostolaza; M Bourbon; C Martin
Journal:  Sci Rep       Date:  2015-12-08       Impact factor: 4.379

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