| Literature DB >> 21985457 |
Rusheng Chew1, Carmen Calderón, Samuel G Schumacher, Jonathan M Sherman, Luz Caviedes, Patricia Fuentes, Jorge Coronel, Teresa Valencia, Beatriz Hererra, Mirko Zimic, Lucy Huaroto, Ivan Sabogal, A Rod Escombe, Robert H Gilman, Carlton A Evans.
Abstract
BACKGROUND: Bleach-sedimentation may improve microscopy for diagnosing tuberculosis by sterilising sputum and concentrating Mycobacterium tuberculosis. We studied gravity bleach-sedimentation effects on safety, sensitivity, speed and reliability of smear-microscopy.Entities:
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Year: 2011 PMID: 21985457 PMCID: PMC3213181 DOI: 10.1186/1471-2334-11-269
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Figure 1Study flowchart. The Standards for the Reporting of Diagnostic Accuracy (STARD) flowchart for the study. Results were available for all of the procedures planned in the study protocol.
Figure 2Bleach sterilization. M. tuberculosis viability after treatment of sputum specimens with 4 different bleach concentrations for 4 different exposure times, i.e. a total of 16 combinations of bleach concentrations and exposure times. All control specimens were culture-positive.
Figure 3Effect of bleach-sedimentation on the concentration of acid-fast bacilli. The number of acid-fast bacilli visualised by smear-microscopy is shown. Each of the open circles represents the geometric mean number of acid-fast bacilli visible in 100 microscopy fields for triplicate, identically prepared slides. Each line joins the data derived from 1 of the 25 sputum specimens i.e. the geometric mean of triplicate conventional smear-microscopy slides (the left-hand end of each line) versus the geometric mean of triplicate slides prepared after bleach-sedimentation (the right-hand end of each line). The filled diamonds represent the geometric mean of all 25 specimens and the error bars represent 95% confidence intervals. The box parallel with the vertical axis indicates the smear-microscopy grade equivalent to the acid-fast bacilli counts per 100 microscopy fields (0 indicates none visible/100 fields; +/- indicates 1-9/100 fields; + indicates 10-99/100 fields; ++ indicates 100-999/100 fields; and +++ indicates > 1, 000/100 fields).
Comparison of conventional smears and smears prepared from bleach-sedimented sputum
| Conventional smears | Smears prepared from bleach-sedimented sputum * | ||
|---|---|---|---|
| Acid-fast bacilli counts per 100 microscopy fields, geometric mean (95% CI) | 346 (139-862) | 166 (68-406) | 0.02 |
| Slide-reading time, arithmetic mean minutes (standard error of the mean) | 11.2 (0.92) | 9.6 (0.69) | 0.03 |
| Inter-observer agreement, correlation coefficient (r) | 0.991 | 0.997 | - |
| Correlation between concentrating effect of bleach-sedimentation and acid-fast bacilli counts, correlation coefficient (r) | -0.46 | 0.02 | |
| Correlation between concentrating effect of bleach-sedimentation and volume of the sputum specimen, correlation coefficient (r) | -0.13 | 0.7 | |
| Concentrating effect of bleach-sedimentation comparing salivary versus mucoid sputum specimens | - | 0.3 | |
| Concentrating effect of bleach-sedimentation comparing moderately versus very experienced microscopists | - | 0.6 | |
* False-negative (zero) microscopy readings by a single microscopist for 3 strongly positive smears prepared from bleach-sedimented specimens were excluded when calculating these data (see text and Figure 5).
Figure 4Correlation between the numbers of acid-fast bacilli visible by sputum smear-microscopy and the bleach-sedimentation concentrating effect. Each data point represents data from a single specimen. The horizontal axis shows the geometric mean number of acid-fast bacilli per 100 microscopy fields visualised in triplicate conventional smears. The horizontal error bars represent the standard error of the mean (SEM) for these triplicate data. The vertical axis shows the mean change in the number of acid-fast bacilli per 100 microscopy fields visualised in triplicate slides prepared after bleach-sedimentation of that specimen. The vertical error bars represent the SEM for these triplicate data. The diagonal broken line is the regression line. r represents the correlation coefficient. The box parallel with the horizontal axis indicates the smear-microscopy grade equivalent to the acid-fast bacilli counts per 100 microscopy fields (0 indicates none visible/100 fields; +/- indicates 1-9/100 fields; + indicates 10-99/100 fields; ++ indicates 100-999/100 fields; and +++ indicates > 1000/100 fields).
Figure 5Microscopist inter-observer agreement. The inter-observer agreement is shown for 2 microscopists for conventional smears and for smears prepared after bleach-sedimentation. Filled circles represent smears prepared from bleach-sedimented sputum (correlation coefficient r = 0.707), and open diamonds represent conventional smears (r = 0.991). The 3 data points encircled by broken lines represent smears prepared from bleach-sedimented sputum found to be clearly positive by one reader but negative by the other reader. Excluding these 3 false-negative results caused the value of the correlation coefficient for results from bleach-sedimented sputum to increase to r = 0.997. The dotted line represents perfect agreement. The boxes parallel with the axes indicate the smear-microscopy grade equivalent to the acid-fast bacilli counts per 100 microscopy fields (0 indicates none visible/100 fields; +/- indicates 1-9/100 fields; + indicates 10-99/100 fields; ++ indicates 100-999/100 fields; and +++ indicates > 1000/100 fields).