Literature DB >> 21982714

Imaging cytosolic NADH-NAD(+) redox state with a genetically encoded fluorescent biosensor.

Yin Pun Hung1, John G Albeck, Mathew Tantama, Gary Yellen.   

Abstract

NADH is a key metabolic cofactor whose sensitive and specific detection in the cytosol of live cells has been difficult. We constructed a fluorescent biosensor of the cytosolic NADH-NAD(+) redox state by combining a circularly permuted GFP T-Sapphire with a bacterial NADH-binding protein, Rex. Although the initial construct reported [NADH] × [H(+)] / [NAD(+)], its pH sensitivity was eliminated by mutagenesis. The engineered biosensor Peredox reports cytosolic NADH:NAD(+) ratios and can be calibrated with exogenous lactate and pyruvate. We demonstrated its utility in several cultured and primary cell types. We found that glycolysis opposed the lactate dehydrogenase equilibrium to produce a reduced cytosolic NADH-NAD(+) redox state. We also observed different redox states in primary mouse astrocytes and neurons, consistent with hypothesized metabolic differences. Furthermore, using high-content image analysis, we monitored NADH responses to PI3K pathway inhibition in hundreds of live cells. As an NADH reporter, Peredox should enable better understanding of bioenergetics.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21982714      PMCID: PMC3190165          DOI: 10.1016/j.cmet.2011.08.012

Source DB:  PubMed          Journal:  Cell Metab        ISSN: 1550-4131            Impact factor:   27.287


  47 in total

1.  Imaging intracellular pH in live cells with a genetically encoded red fluorescent protein sensor.

Authors:  Mathew Tantama; Yin Pun Hung; Gary Yellen
Journal:  J Am Chem Soc       Date:  2011-06-09       Impact factor: 15.419

2.  Morphogenesis and oncogenesis of MCF-10A mammary epithelial acini grown in three-dimensional basement membrane cultures.

Authors:  Jayanta Debnath; Senthil K Muthuswamy; Joan S Brugge
Journal:  Methods       Date:  2003-07       Impact factor: 3.608

3.  Transcription corepressor CtBP is an NAD(+)-regulated dehydrogenase.

Authors:  Vivek Kumar; Justin E Carlson; Kenneth A Ohgi; Thomas A Edwards; David W Rose; Carlos R Escalante; Michael G Rosenfeld; Aneel K Aggarwal
Journal:  Mol Cell       Date:  2002-10       Impact factor: 17.970

4.  Regulation of corepressor function by nuclear NADH.

Authors:  Qinghong Zhang; David W Piston; Richard H Goodman
Journal:  Science       Date:  2002-02-14       Impact factor: 47.728

5.  Circularly permuted green fluorescent proteins engineered to sense Ca2+.

Authors:  T Nagai; A Sawano; E S Park; A Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-06       Impact factor: 11.205

6.  Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.

Authors:  O Griesbeck; G S Baird; R E Campbell; D A Zacharias; R Y Tsien
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

7.  Intracellular pH sensing using autofluorescence lifetime microscopy.

Authors:  Shinya Ogikubo; Takakazu Nakabayashi; Takashi Adachi; Md Serajul Islam; Tomokazu Yoshizawa; Masataka Kinjo; Nobuhiro Ohta
Journal:  J Phys Chem B       Date:  2011-08-09       Impact factor: 2.991

8.  NAD(P)H fluorescence imaging of postsynaptic neuronal activation in murine hippocampal slices.

Authors:  C William Shuttleworth; Angela M Brennan; John A Connor
Journal:  J Neurosci       Date:  2003-04-15       Impact factor: 6.167

9.  A novel sensor of NADH/NAD+ redox poise in Streptomyces coelicolor A3(2).

Authors:  Dimitris Brekasis; Mark S B Paget
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

10.  Efficiently folding and circularly permuted variants of the Sapphire mutant of GFP.

Authors:  Otilia Zapata-Hommer; Oliver Griesbeck
Journal:  BMC Biotechnol       Date:  2003-05-22       Impact factor: 2.563

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  194 in total

Review 1.  Location, Location, Location: Compartmentalization of NAD+ Synthesis and Functions in Mammalian Cells.

Authors:  Xiaolu A Cambronne; W Lee Kraus
Journal:  Trends Biochem Sci       Date:  2020-06-25       Impact factor: 13.807

2.  Characterization of Frex as an NADH sensor for in vivo applications in the presence of NAD+ and at various pH values.

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Journal:  Photosynth Res       Date:  2017-03-06       Impact factor: 3.573

3.  Single-cell imaging tools for brain energy metabolism: a review.

Authors:  Alejandro San Martín; Tamara Sotelo-Hitschfeld; Rodrigo Lerchundi; Ignacio Fernández-Moncada; Sebastian Ceballo; Rocío Valdebenito; Felipe Baeza-Lehnert; Karin Alegría; Yasna Contreras-Baeza; Pamela Garrido-Gerter; Ignacio Romero-Gómez; L Felipe Barros
Journal:  Neurophotonics       Date:  2014-05-29       Impact factor: 3.593

Review 4.  Fluorescent Biosensors for Neuronal Metabolism and the Challenges of Quantitation.

Authors:  Dorothy Koveal; Carlos Manlio Díaz-García; Gary Yellen
Journal:  Curr Opin Neurobiol       Date:  2020-06-16       Impact factor: 6.627

5.  The mitochondrial permeability transition pore regulates endothelial bioenergetics and angiogenesis.

Authors:  Raluca Marcu; Surya Kotha; Zhongwei Zhi; Wan Qin; Christopher K Neeley; Ruikang K Wang; Ying Zheng; Brian J Hawkins
Journal:  Circ Res       Date:  2015-02-26       Impact factor: 17.367

Review 6.  Crosstalk of Signaling and Metabolism Mediated by the NAD(+)/NADH Redox State in Brain Cells.

Authors:  Ulrike Winkler; Johannes Hirrlinger
Journal:  Neurochem Res       Date:  2015-02-10       Impact factor: 3.996

7.  GAD1 Upregulation Programs Aggressive Features of Cancer Cell Metabolism in the Brain Metastatic Microenvironment.

Authors:  Patricia M Schnepp; Dennis D Lee; Ian H Guldner; Treasa K O'Tighearnaigh; Erin N Howe; Bhavana Palakurthi; Kaitlyn E Eckert; Tiffany A Toni; Brandon L Ashfeld; Siyuan Zhang
Journal:  Cancer Res       Date:  2017-04-11       Impact factor: 12.701

8.  Genetically encoded fluorescent indicator for imaging NAD(+)/NADH ratio changes in different cellular compartments.

Authors:  Dmitry S Bilan; Mikhail E Matlashov; Andrey Yu Gorokhovatsky; Carsten Schultz; Grigori Enikolopov; Vsevolod V Belousov
Journal:  Biochim Biophys Acta       Date:  2013-11-25

9.  SPG7 Is an Essential and Conserved Component of the Mitochondrial Permeability Transition Pore.

Authors:  Santhanam Shanmughapriya; Sudarsan Rajan; Nicholas E Hoffman; Andrew M Higgins; Dhanendra Tomar; Neeharika Nemani; Kevin J Hines; Dylan J Smith; Akito Eguchi; Sandhya Vallem; Farah Shaikh; Maggie Cheung; Nicole J Leonard; Ryan S Stolakis; Matthew P Wolfers; Jessica Ibetti; J Kurt Chuprun; Neelakshi R Jog; Steven R Houser; Walter J Koch; John W Elrod; Muniswamy Madesh
Journal:  Mol Cell       Date:  2015-09-17       Impact factor: 17.970

Review 10.  Metabolomics and Isotope Tracing.

Authors:  Cholsoon Jang; Li Chen; Joshua D Rabinowitz
Journal:  Cell       Date:  2018-05-03       Impact factor: 41.582

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