| Literature DB >> 21980437 |
Sara M Santos1, Filipe Carvalho, António Mira.
Abstract
BACKGROUND: Road mortality is probably the best-known and visible impact of roads upon wildlife. Although several factors influence road-kill counts, carcass persistence time is considered the most important determinant underlying underestimates of road mortality. The present study aims to describe and model carcass persistence variability on the road for different taxonomic groups under different environmental conditions throughout the year; and also to assess the effect of sampling frequency on the relative variation in road-kill estimates registered within a survey. METHODOLOGY/PRINCIPALEntities:
Mesh:
Year: 2011 PMID: 21980437 PMCID: PMC3181337 DOI: 10.1371/journal.pone.0025383
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Summary of results for persistence estimates for each taxonomic group and the “all taxa” data set (N: sample size; Median (95% CI): median persistence probabilities and corresponding 95% confidence intervals obtained with a Kaplan-Meier estimator; MPT: maximum persistence time recorded (in days); S(t = 1), S(t = 2), S(t = 7): estimate of persistence probability for 1-day, 2-day and 7-day intervals obtained with a Kaplan-Meier estimator).
| Taxonomic group | N | Median (95% CI) | MPT (days) | S(t = 1) | S(t = 2) | S(t = 7) |
| Toads | 409 | 1 (1-1) | 12 | 0.267 | 0.100 | 0.010 |
| Salamanders | 833 | 1 (1-1) | 15 | 0.455 | 0.228 | 0.016 |
| Lizards | 107 | 1 (1-1) | 4 | 0.056 | 0.019 | 0.000 |
| Snakes | 146 | 1 (1-1) | 14 | 0.397 | 0.212 | 0.034 |
| Freshwater turtles | 22 | 3 (2-5) | 51 | 0.818 | 0.591 | 0.182 |
| Small birds | 1990 | 1 (1-1) | 63 | 0.366 | 0.203 | 0.032 |
| Large birds | 46 | 4 (2-6) | 51 | 0.717 | 0.609 | 0.283 |
| Birds of prey | 110 | 6 (4-9) | 94 | 0.745 | 0.673 | 0.445 |
| Bats | 82 | 1 (1-1) | 5 | 0.146 | 0.037 | 0.000 |
| Small mammals | 270 | 1 (1-1) | 16 | 0.389 | 0.241 | 0.030 |
| Lagomorphs | 208 | 2 (1-2) | 25 | 0.505 | 0.351 | 0.077 |
| Hedgehogs | 106 | 4.5 (3-7) | 106 | 0.774 | 0.632 | 0.377 |
| Carnivores | 92 | 9 (5-19) | 158 | 0.804 | 0.706 | 0.543 |
|
|
|
|
|
|
|
|
Figure 1Overall survival curve for the “all taxa” data set (Kaplan-Meier estimate and corresponding 95% confidence intervals; N = 4447; the length of time axis is limited to a maximum of 15 days).
Figure 2Separate survival curves for the 13 taxonomic groups; Toads: toads (including frogs), Lbirds: large birds (more than 200 g, and excluding raptors), Sbirds: small birds (less than 200 g), Carniv: carnivores; Fturtles: freshwater turtles, Hedgeh: hedgehogs, Lizar: lizards, Lagom: lagomorphs, Smammals: small mammals, Bats: bats, Bprey: birds of prey (diurnal and nocturnal), Snake: snakes, Salam: salamanders (including newts); (Kaplan-Meier estimates; N = 4447; the length of time axis is limited to a maximum of 15 days).
Multivariate Cox hazards models for the persistence time of “all taxa” data set, stratified by taxonomic group (β: coefficients, eβ: hazards ratio, eβ LCI 95%: 95% lower confidence interval for hazards ratio, eβ UCI 95%: 95% upper confidence interval for hazards ratio, z: Wald test, P value: significance of Wald test); performance parameters of the model: R2 = 0.099; Likelihood test = 464.9, df = 14, P-value<0.0001.
| Variables | β | eβ | eβLCI 95% | eβUCI 95% | z | P value |
| bmass (2) | −0.115 | 0.891 | 0.818 | 0.971 | −2.627 | 0.009 |
| bmass (3) | −0.798 | 0.450 | 0.368 | 0.550 | −7.809 | <0.0001 |
| bmass (4) | −1.559 | 0.210 | 0.040 | 1.103 | −1.844 | 0.065 |
| raindays | 0.432 | 1.541 | 1.421 | 1.671 | 10.491 | <0.0001 |
| traffic (2) | 0.068 | 1.071 | 0.958 | 1.197 | 1.211 | 0.226 |
| traffic (3) | −0.054 | 0.947 | 0.853 | 1.051 | −1.022 | 0.307 |
| traffic (4) | −0.240 | 0.786 | 0.698 | 0.886 | −3.946 | <0.0001 |
| rposition (2) | 0.089 | 1.093 | 0.973 | 1.228 | 1.495 | 0.135 |
| rposition (3) | −0.051 | 0.950 | 0.881 | 1.025 | −1.330 | 0.183 |
| rposition (4) | −0.177 | 0.837 | 0.725 | 0.968 | −2.401 | 0.016 |
| season (2) | −0.201 | 0.818 | 0.621 | 1.077 | −1.433 | 0.152 |
| mintemp | −0.001 | 0.998 | 0.985 | 1.012 | −0.216 | 0.829 |
| season (2) * raindays | −0.265 | 0.767 | 0.695 | 0.847 | −5.238 | <0.0001 |
| season (2) * mintemp | 0.064 | 1.066 | 1.043 | 1.090 | 5.723 | <0.0001 |
Summary of performance parameters of Cox proportional hazards models for the 12 taxonomic groups analyzed (R2: explained variance, LL test: Likelihood test, df: degrees of freedom, P-value: significance of Likelihood test).
| Taxonomic group | R2 | LL test | df | P-value |
| Bats | 0.064 | 5.39 | 2 | 0.067 |
| Toads | 0.174 | 78.01 | 6 | <0.0001 |
| Salamanders | 0.159 | 144.70 | 6 | <0.0001 |
| Small mammals | 0.108 | 30.92 | 4 | <0.0001 |
| Snakes | 0.166 | 26.45 | 4 | <0.0001 |
| Small birds | 0.141 | 301.70 | 13 | <0.0001 |
| Lagomorphs | 0.066 | 14.12 | 5 | 0.015 |
| Freshwater turtles | 0.668 | 24.23 | 3 | <0.0001 |
| Large birds | 0.463 | 28.64 | 5 | <0.0001 |
| Hedgehogs | 0.322 | 41.25 | 4 | <0.0001 |
| Birds of prey | 0.093 | 10.76 | 3 | 0.013 |
| Carnivores | 0.427 | 51.17 | 8 | <0.0001 |
Multivariate Cox hazards models for Bats, Toads, Salamanders, and Small mammals (β: coefficients, eβ: hazards ratio, eβ LCI 95%: 95% lower confidence interval for hazards ratio, eβ UCI 95%: 95% upper confidence interval for hazards ratio, z: Wald test, P-value: significance of Wald test, for variables definition, see table 8).
| Variables | β | eβ | eβLCI 95% | eβUCI 95% | z | P-value |
|
| ||||||
| rposition (2) | −0.588 | 0.555 | 0.270 | 1.141 | −1.602 | 0.109 |
| rposition (3) | 0.218 | 1.244 | 0.775 | 1.994 | 0.905 | 0.366 |
|
| ||||||
| bmass | −0.007 | 0.993 | 0.990 | 0.996 | −5.005 | <0.0001 |
| raindays | 0.310 | 1.364 | 1.050 | 1.772 | 2.323 | 0.020 |
| mintemp | 0.065 | 1.067 | 1.032 | 1.105 | 3.745 | <0.001 |
| traffic (2) | 0.317 | 1.373 | 0.961 | 1.961 | 1.740 | 0.082 |
| traffic (3) | 0.202 | 1.224 | 0.905 | 1.658 | 1.311 | 0.190 |
| traffic 4) | −0.094 | 0.910 | 0.650 | 1.275 | −0.546 | 0.585 |
|
| ||||||
| raindays | 0.793 | 2.209 | 1.775 | 2.751 | 7.091 | <0.0001 |
| season (2) | −2.445 | 0.087 | 0.031 | 0.240 | −4.706 | <0.0001 |
| bmass | −0.042 | 0.959 | 0.926 | 0.993 | −2.325 | 0.020 |
| rainamount | 0.075 | 1.078 | 0.999 | 1.163 | 1.932 | 0.053 |
| mintemp | 0.030 | 1.030 | 0.995 | 1.066 | 1.690 | 0.091 |
| season (2) * mintemp | 0.198 | 1.219 | 1.117 | 1.329 | 4.467 | <0.0001 |
|
| ||||||
| raindays | 0.509 | 1.663 | 1.327 | 2.085 | 4.418 | <0.0001 |
| bmass | −0.229 | 0.795 | 0.686 | 0.922 | −3.042 | 0.002 |
| rainamount | −0.234 | 0.791 | 0.659 | 0.951 | −2.497 | 0.012 |
| mintemp | 0.024 | 1.025 | 0.999 | 1.051 | 1.892 | 0.058 |
Multivariate Cox hazards models for Snakes, Small birds, and Lagomorphs (β: coefficients, eβ: hazards ratio, eβ LCI 95%: 95% lower confidence interval for hazards ratio, eβ UCI 95%: 95% upper confidence interval for hazards ratio, z: Wald test, P-value: significance of Wald test, for variables definition, see table 8).
| Variables | β | eβ | eβLCI 95% | eβUCI 95% | z | P-value |
|
| ||||||
| raindays | 0.408 | 1.504 | 1.069 | 2.116 | 2.343 | 0.019 |
| rainamount | −0.489 | 0.613 | 0.463 | 0.811 | −3.431 | <0.001 |
| mintemp | 0.089 | 1.093 | 1.032 | 1.159 | 3.017 | 0.002 |
| bcondition (2) | −0.308 | 0.735 | 0.499 | 1.082 | −1.561 | 0.118 |
|
| ||||||
| raindays | 0.485 | 1.624 | 1.446 | 1.824 | 8.202 | <0.0001 |
| rainamount | −0.313 | 0.731 | 0.666 | 0.802 | −6.609 | <0.0001 |
| bmass | −0.220 | 0.802 | 0.726 | 0.887 | −4.283 | <0.0001 |
| traffic (2) | 0.107 | 1.113 | 0.915 | 1.355 | 1.074 | 0.283 |
| traffic (3) | −0.089 | 0.915 | 0.771 | 1.086 | −1.015 | 0.310 |
| traffic (4) | −0.294 | 0.745 | 0.619 | 0.898 | −3.099 | 0.002 |
| rposition (2) | 0.188 | 1.207 | 0.993 | 1.468 | 1.888 | 0.059 |
| rposition (3) | −0.050 | 0.951 | 0.856 | 1.057 | −0.932 | 0.351 |
| rposition (4) | −0.052 | 0.949 | 0.795 | 1.134 | −0.571 | 0.568 |
| season (2) | 0.068 | 1.071 | 0.741 | 1.547 | 0.364 | 0.715 |
| Mintemp | 0.004 | 1.004 | 0.985 | 1.023 | 0.383 | 0.701 |
| season (2) * raindays | −0.204 | 0.815 | 0.702 | 0.947 | −2.676 | 0.007 |
| season (2) * mintemp | 0.045 | 1.046 | 1.015 | 1.078 | 2.953 | 0.003 |
|
| ||||||
| traffic (2) | −0.783 | 0.457 | 0.159 | 1.317 | −1.450 | 0.147 |
| traffic (3) | −1.103 | 0.332 | 0.120 | 0.915 | −2.132 | 0.033 |
| traffic (4) | −1.305 | 0.271 | 0.091 | 0.805 | −2.352 | 0.019 |
| raindays | 0.348 | 1.417 | 1.049 | 1.914 | 2.272 | 0.023 |
| rainamount | −0.312 | 0.732 | 0.547 | 0.979 | −2.100 | 0.036 |
Multivariate Cox hazards models for Freshwater turtles, Large birds, and Hedgehogs (β: coefficients, eβ: hazards ratio, eβ LCI 95%: 95% lower confidence interval for hazards ratio, eβ UCI 95%: 95% upper confidence interval for hazards ratio, z: Wald test, P-value: significance of Wald test, for variables definition, see table 8).
| Variables | β | eβ | eβLCI 95% | eβUCI 95% | z | P-value |
|
| ||||||
| rposition (3) | −3.377 | 0.034 | 0.006 | 0.178 | −4.004 | <0.0001 |
| rposition (4) | 2.755 | 15.718 | 1.366 | 180.787 | 2.211 | 0.027 |
| mintemp | 0.266 | 1.305 | 1.072 | 1.588 | 2.656 | 0.008 |
|
| ||||||
| season (2) | 1.452 | 4.274 | 2.095 | 8.718 | 3.993 | <0.0001 |
| rposition (2) | 0.792 | 2.208 | 0.705 | 6.913 | 1.361 | 0.174 |
| rposition (3) | 0.918 | 2.504 | 1.195 | 5.250 | 2.431 | 0.015 |
| rposition (4) | −1.267 | 0.282 | 0.099 | 0.799 | −2.382 | 0.017 |
| bmass | −0.005 | 0.995 | 0.991 | 0.998 | −2.706 | 0.007 |
|
| ||||||
| raindays | 1.958 | 7.087 | 3.063 | 16.394 | 4.576 | <0.0001 |
| season (2) | 1.770 | 5.870 | 2.596 | 13.268 | 4.253 | <0.0001 |
| rainamount | −0.823 | 0.439 | 0.292 | 0.661 | −3.945 | <0.0001 |
| season (2) * raindays | −1.080 | 0.340 | 0.128 | 0.902 | −2.167 | 0.030 |
Multivariate Cox hazards models for Birds of prey and Carnivores (β: coefficients, eβ: hazards ratio, eβ LCI 95%: 95% lower confidence interval for hazards ratio, eβ UCI 95%: 95% upper confidence interval for hazards ratio, z: Wald test, P-value: significance of Wald test, for variables definition, see table 8).
| Variables | β | eβ | eβLCI 95% | eβUCI 95% | z | P-value |
|
| ||||||
| season (2) | 1.163 | 3.200 | 1.316 | 7.779 | 2.566 | 0.010 |
| rainamount | −0.459 | 0.632 | 0.414 | 0.964 | −2.131 | 0.033 |
| mintemp | −0.086 | 0.917 | 0.847 | 0.993 | −2.124 | 0.034 |
|
| ||||||
| raindays | 1.998 | 7.375 | 3.714 | 14.643 | 5.710 | <0.0001 |
| rainamount | −1.356 | 0.258 | 0.153 | 0.434 | −5.108 | <0.0001 |
| season (2) | 0.794 | 2.212 | 0.994 | 4.924 | 1.945 | 0.052 |
| rposition (2) | −0.713 | 0.490 | 0.153 | 1.567 | −1.202 | 0.229 |
| rposition (3) | −0.604 | 0.546 | 0.327 | 0.913 | −2.309 | 0.021 |
| rposition (4) | −1.438 | 0.237 | 0.092 | 0.615 | −2.959 | 0.003 |
| bcondition(2) | −0.652 | 0.521 | 0.320 | 0.847 | −2.631 | 0.008 |
| mintemp | −0.085 | 0.919 | 0.853 | 0.989 | −2.238 | 0.025 |
List of explanatory variables, their definition, and values.
| Variable | Definition | Values |
| road | Identification of the road where road-kill was registered | 1: M529/M370; 2: N4; 3: N114 |
| traffic | Class of road traffic volume | 1: <1 000 vehicles/day (M370); 2: 1 000 4 000 vehicles/day (M529); 3: 4 000–10 000 vehicles/day (N4A, N4B, N114A); 4: >10 000 vehicles/day (N114B) |
| rposition | Position of the carcass on the road | 1: lane; 2: center; 3: paved shoulder; 4: unpaved shoulder |
| bcondition | Integrity status of the carcass | 1: full carcass; 2: remains |
| Bmass | Mean body mass of species (or taxonomic group) according to bibliographic references (see text) | 3.3–7300 g (1: <20 g; 2: 20–100 g; 3: 100–1000 g; 4: >1000 g) |
| blength | Mean body length of species (or taxonomic group) according to bibliographic references (see text) | 3.7–151.7 cm |
| season | Period of the year in which the carcass was initially found | 1: Nov–Apr (wet season); 2: May–Oct (dry season) |
| raindays | Proportion of days with rainfall during the time the animal remained on the road (number of days with rain/number of days the animal remained on the road) | 0–1 |
| rainamount | Rainfall abundance during the time the animal remained on the road (total amount of rainfall/number of days the animal remained on the road) | 0–41.9 mm/day |
| meantemp | Daily mean temperature during the time the animal remained on the road | 2.2–30.2°C |
| maxtemp | Daily maximum temperature during the time the animal remained on the road | 7.1–40.8°C |
| mintemp | Daily minimum temperature during the time the animal remained on the road | −3.6–21°C |
values of traffic intensity for each road segment after E.P.E. (2005) and our own data (António Mira, unpublished data).
logarithmic transformation for small birds, small mammals and birds of prey;
body mass was considered continuous for taxonomic groups data, and categorical for the “all taxa” data set;
arcsine transformation for all taxonomic groups;
logarithmic transformation for all taxonomic groups.