Literature DB >> 21972197

Separation strategies for untargeted metabolomics.

Gary J Patti1.   

Abstract

Metabolomics has rapidly become a profiling technique of choice for biomarker elucidation and molecular diagnostics in addition to studies focused on understanding disease pathogenesis. Key to the success of metabolomics in these areas has been the techniques to separate and analyze the chemically diverse group of compounds comprising the metabolome by using global and untargeted approaches. Untargeted metabolomic efforts have the goal of examining as many metabolites as possible simultaneously and most frequently use an LC/MS-based approach. Here, the importance of LC in an untargeted metabolomic workflow is outlined and separation strategies for optimization are reviewed within the context of these criteria.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21972197     DOI: 10.1002/jssc.201100532

Source DB:  PubMed          Journal:  J Sep Sci        ISSN: 1615-9306            Impact factor:   3.645


  37 in total

1.  Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling.

Authors:  Boer Xie; Yuanyuan Wang; Drew R Jones; Kaushik Kumar Dey; Xusheng Wang; Yuxin Li; Ji-Hoon Cho; Timothy I Shaw; Haiyan Tan; Junmin Peng
Journal:  Anal Chem       Date:  2018-06-25       Impact factor: 6.986

Review 2.  Defining the metabolome: size, flux, and regulation.

Authors:  Nicola Zamboni; Alan Saghatelian; Gary J Patti
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

3.  Nephron Toxicity Profiling via Untargeted Metabolome Analysis Employing a High Performance Liquid Chromatography-Mass Spectrometry-based Experimental and Computational Pipeline.

Authors:  Christina Ranninger; Marc Rurik; Alice Limonciel; Silke Ruzek; Roland Reischl; Anja Wilmes; Paul Jennings; Philip Hewitt; Wolfgang Dekant; Oliver Kohlbacher; Christian G Huber
Journal:  J Biol Chem       Date:  2015-06-08       Impact factor: 5.157

Review 4.  Application of Metabolomics to Osteoarthritis: from Basic Science to the Clinical Approach.

Authors:  Salah Ali A Showiheen; Antonia RuJia Sun; Xiaoxin Wu; Ross Crawford; Yin Xiao; R Mark Wellard; Indira Prasadam
Journal:  Curr Rheumatol Rep       Date:  2019-05-06       Impact factor: 4.592

5.  Measurement of DNA concentration as a normalization strategy for metabolomic data from adherent cell lines.

Authors:  Leslie P Silva; Philip L Lorenzi; Preeti Purwaha; Valeda Yong; David H Hawke; John N Weinstein
Journal:  Anal Chem       Date:  2013-10-02       Impact factor: 6.986

6.  The ABRF Metabolomics Research Group 2013 Study: Investigation of Spiked Compound Differences in a Human Plasma Matrix.

Authors:  Amrita K Cheema; John M Asara; Yiwen Wang; Thomas A Neubert; Vladimir Tolstikov; Chris W Turck
Journal:  J Biomol Tech       Date:  2015-09

Review 7.  Innovation: Metabolomics: the apogee of the omics trilogy.

Authors:  Gary J Patti; Oscar Yanes; Gary Siuzdak
Journal:  Nat Rev Mol Cell Biol       Date:  2012-03-22       Impact factor: 94.444

Review 8.  Chemical Discovery in the Era of Metabolomics.

Authors:  Miriam Sindelar; Gary J Patti
Journal:  J Am Chem Soc       Date:  2020-05-11       Impact factor: 15.419

9.  Simultaneous, untargeted metabolic profiling of polar and nonpolar metabolites by LC-Q-TOF mass spectrometry.

Authors:  Jay S Kirkwood; Claudia Maier; Jan F Stevens
Journal:  Curr Protoc Toxicol       Date:  2013-05

10.  Metabolomic profiles of current cigarette smokers.

Authors:  Ping-Ching Hsu; Renny S Lan; Theodore M Brasky; Catalin Marian; Amrita K Cheema; Habtom W Ressom; Christopher A Loffredo; Wallace B Pickworth; Peter G Shields
Journal:  Mol Carcinog       Date:  2016-08-22       Impact factor: 4.784

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