Literature DB >> 21966573

Novel tools for an old lineage: Population genomics for cycads.

Angelica Cibrián-Jaramillo1, Thomas E Marler.   

Abstract

With a ca. 300 million year-old evolutionary history, cycads are often perceived as "living fossils," relicts of their previously widespread dominance. Patterns of genetic variation for a member of the most basal cycad genus, Cycas micronesica, support the notion that cycads are a dynamic group with ongoing diversification. Herein we hypothesize that cycad's hefty genomes enable rapid adaptive change and facilitate specific beneficial interactions with varying assemblages of symbionts. Characterizing population-level genomic patterns of cycads and their symbionts, pollinators in particular, will enlighten our understanding of these mechanisms and of adaptive variation that underlies cycad evolution. In light of rapid climate and landscape change, cycads are a beacon for understanding the ecological processes that ultimately enable species long-term survival.

Entities:  

Keywords:  Cycas micronesica; adaptive variation; cycads; ecological genomics; next-generation sequencing; wild populations

Year:  2011        PMID: 21966573      PMCID: PMC3181523          DOI: 10.4161/cib.4.4.15546

Source DB:  PubMed          Journal:  Commun Integr Biol        ISSN: 1942-0889


  25 in total

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4.  Odor-mediated push-pull pollination in cycads.

Authors:  Irene Terry; Gimme H Walter; Chris Moore; Robert Roemer; Craig Hull
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5.  High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: incomplete concerted evolution and the origin of pseudogenes.

Authors:  Long-Qian Xiao; Michael Möller; Hua Zhu
Journal:  Mol Phylogenet Evol       Date:  2009-11-27       Impact factor: 4.286

6.  Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection.

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Review 7.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
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8.  Comparative analysis of pistil transcriptomes reveals conserved and novel genes expressed in dry, wet, and semidry stigmas.

Authors:  Alexandra M Allen; Christian Lexer; Simon J Hiscock
Journal:  Plant Physiol       Date:  2010-09-02       Impact factor: 8.340

9.  Ecological context of the evolution of self-pollination in Clarkia xantiana: population size, plant communities, and reproductive assurance.

Authors:  David A Moeller; Monica A Geber
Journal:  Evolution       Date:  2005-04       Impact factor: 3.694

10.  Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags.

Authors:  Paul A Hohenlohe; Susan Bassham; Paul D Etter; Nicholas Stiffler; Eric A Johnson; William A Cresko
Journal:  PLoS Genet       Date:  2010-02-26       Impact factor: 5.917

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  1 in total

1.  First, do no harm.

Authors:  Thomas E Marler; Anders J Lindström
Journal:  Commun Integr Biol       Date:  2017-12-04
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