Literature DB >> 21952545

Genome sequence of the human pathogen Vibrio cholerae Amazonia.

Cristiane C Thompson1, Michel A Marin, Graciela M Dias, Bas E Dutilh, Robert A Edwards, Tetsuya Iida, Fabiano L Thompson, Ana Carolina P Vicente.   

Abstract

Vibrio cholerae O1 Amazonia is a pathogen that was isolated from cholera-like diarrhea cases in at least two countries, Brazil and Ghana. Based on multilocus sequence analysis, this lineage belongs to a distinct profile compared to strains from El Tor and classical biotypes. The genomic analysis revealed that it contains Vibrio pathogenicity island 2 and a set of genes related to pathogenesis and fitness, such as the type VI secretion system, present in choleragenic V. cholerae strains.

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Year:  2011        PMID： 21952545      PMCID： PMC3187201          DOI： 10.1128/JB.05643-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  The Vibrio cholerae type VI secretion system displays antimicrobial properties.

Authors:  Dana L MacIntyre; Sarah T Miyata; Maya Kitaoka; Stefan Pukatzki
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

3.  A distinctive class of integron in the Vibrio cholerae genome.

Authors:  D Mazel; B Dychinco; V A Webb; J Davies
Journal:  Science       Date:  1998-04-24       Impact factor: 47.728

4.  Cytotoxic cell vacuolating activity from Vibrio cholerae hemolysin.

Authors:  A Coelho; J R Andrade; A C Vicente; V J Dirita
Journal:  Infect Immun       Date:  2000-03       Impact factor: 3.441

5.  Vibrio cholerae O1 lineages driving cholera outbreaks during seventh cholera pandemic in Ghana.

Authors:  Cristiane C Thompson; Fernanda S Freitas; Michel A Marin; Erica L Fonseca; Iruka N Okeke; Ana Carolina P Vicente
Journal:  Infect Genet Evol       Date:  2011-08-30       Impact factor: 3.342

6.  Three pathogenicity islands of Vibrio cholerae can excise from the chromosome and form circular intermediates.

Authors:  Ronan A Murphy; E Fidelma Boyd
Journal:  J Bacteriol       Date:  2007-11-09       Impact factor: 3.490

7.  New variant of Vibrio cholerae O1 from clinical isolates in Amazonia.

Authors:  A Coelho; J R Andrade; A C Vicente; C A Salles
Journal:  J Clin Microbiol       Date:  1995-01       Impact factor: 5.948

8.  The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.

Authors:  F Meyer; D Paarmann; M D'Souza; R Olson; E M Glass; M Kubal; T Paczian; A Rodriguez; R Stevens; A Wilke; J Wilkening; R A Edwards
Journal:  BMC Bioinformatics       Date:  2008-09-19       Impact factor: 3.169
  8 in total
  3 in total

1.  Genetic relatedness of selected clinical and environmental non-O1/O139 Vibrio cholerae.

Authors:  Antonina Aydanian; Li Tang; Yuansha Chen; J Glenn Morris; Peter Olsen; Judith A Johnson; G Balakrish Nair; O Colin Stine
Journal:  Int J Infect Dis       Date:  2015-07-08       Impact factor: 3.623

2.  Microbial genomic taxonomy.

Authors:  Cristiane C Thompson; Luciane Chimetto; Robert A Edwards; Jean Swings; Erko Stackebrandt; Fabiano L Thompson
Journal:  BMC Genomics       Date:  2013-12-23       Impact factor: 3.969

3.  Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions.

Authors:  Bas E Dutilh; Cristiane C Thompson; Ana C P Vicente; Michel A Marin; Clarence Lee; Genivaldo G Z Silva; Robert Schmieder; Bruno G N Andrade; Luciane Chimetto; Daniel Cuevas; Daniel R Garza; Iruka N Okeke; Aaron Oladipo Aboderin; Jessica Spangler; Tristen Ross; Elizabeth A Dinsdale; Fabiano L Thompson; Timothy T Harkins; Robert A Edwards
Journal:  BMC Genomics       Date:  2014-08-05       Impact factor: 3.969
  3 in total

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