Literature DB >> 21950380

Structural anatomy of telomere OB proteins.

Martin P Horvath1.   

Abstract

Telomere DNA-binding proteins protect the ends of chromosomes in eukaryotes. A subset of these proteins are constructed with one or more OB folds and bind with G+T-rich single-stranded DNA found at the extreme termini. The resulting DNA-OB protein complex interacts with other telomere components to coordinate critical telomere functions of DNA protection and DNA synthesis. While the first crystal and NMR structures readily explained protection of telomere ends, the picture of how single-stranded DNA becomes available to serve as primer and template for synthesis of new telomere DNA is only recently coming into focus. New structures of telomere OB fold proteins alongside insights from genetic and biochemical experiments have made significant contributions towards understanding how protein-binding OB proteins collaborate with DNA-binding OB proteins to recruit telomerase and DNA polymerase for telomere homeostasis. This review surveys telomere OB protein structures alongside highly comparable structures derived from replication protein A (RPA) components, with the goal of providing a molecular context for understanding telomere OB protein evolution and mechanism of action in protection and synthesis of telomere DNA.

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Year:  2011        PMID: 21950380      PMCID: PMC4666000          DOI: 10.3109/10409238.2011.609295

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  102 in total

1.  Extended DNA binding site in Pot1 broadens sequence specificity to allow recognition of heterogeneous fission yeast telomeres.

Authors:  Kelly M Trujillo; Jeremy T Bunch; Peter Baumann
Journal:  J Biol Chem       Date:  2005-01-06       Impact factor: 5.157

2.  Structural reorganization and the cooperative binding of single-stranded telomere DNA in Sterkiella nova.

Authors:  Pawel Buczek; Martin P Horvath
Journal:  J Biol Chem       Date:  2006-11-02       Impact factor: 5.157

Review 3.  Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

Authors:  M S Wold
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

4.  The crystal structure of the complex of replication protein A subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding.

Authors:  A Bochkarev; E Bochkareva; L Frappier; A M Edwards
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

5.  Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection.

Authors:  Ming Lei; Elaine R Podell; Thomas R Cech
Journal:  Nat Struct Mol Biol       Date:  2004-11-21       Impact factor: 15.369

6.  A new model for Schizosaccharomyces pombe telomere recognition: the telomeric single-stranded DNA-binding activity of Pot11-389.

Authors:  Johnny E Croy; Elaine R Podell; Deborah S Wuttke
Journal:  J Mol Biol       Date:  2006-06-19       Impact factor: 5.469

7.  Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres.

Authors:  Jia Sun; Eun Young Yu; Yuting Yang; Laura A Confer; Steven H Sun; Ke Wan; Neal F Lue; Ming Lei
Journal:  Genes Dev       Date:  2009-12-15       Impact factor: 11.361

8.  3V: cavity, channel and cleft volume calculator and extractor.

Authors:  Neil R Voss; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2010-05-16       Impact factor: 16.971

9.  Replication factor-A from Saccharomyces cerevisiae is encoded by three essential genes coordinately expressed at S phase.

Authors:  S J Brill; B Stillman
Journal:  Genes Dev       Date:  1991-09       Impact factor: 11.361

10.  Sequence-specific and 3'-end selective single-strand DNA binding by the Oxytricha nova telomere end binding protein alpha subunit.

Authors:  Scott Classen; Dan Lyons; Thomas R Cech; Steve C Schultz
Journal:  Biochemistry       Date:  2003-08-12       Impact factor: 3.162

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  13 in total

Review 1.  Double-stranded telomeric DNA binding proteins: Diversity matters.

Authors:  Filip Červenák; Katarína Juríková; Regina Sepšiová; Martina Neboháčová; Jozef Nosek; L'ubomír Tomáška
Journal:  Cell Cycle       Date:  2017-07-27       Impact factor: 4.534

Review 2.  Single-stranded DNA-binding proteins: multiple domains for multiple functions.

Authors:  Thayne H Dickey; Sarah E Altschuler; Deborah S Wuttke
Journal:  Structure       Date:  2013-07-02       Impact factor: 5.006

3.  Dynamic DNA binding, junction recognition and G4 melting activity underlie the telomeric and genome-wide roles of human CST.

Authors:  Anukana Bhattacharjee; Yongyao Wang; Jiajie Diao; Carolyn M Price
Journal:  Nucleic Acids Res       Date:  2017-12-01       Impact factor: 16.971

4.  A comparative study of protein-ssDNA interactions.

Authors:  Maoxuan Lin; Fareeha K Malik; Jun-Tao Guo
Journal:  NAR Genom Bioinform       Date:  2021-02-23

5.  Nonspecific recognition is achieved in Pot1pC through the use of multiple binding modes.

Authors:  Thayne H Dickey; Marissa A McKercher; Deborah S Wuttke
Journal:  Structure       Date:  2012-11-29       Impact factor: 5.006

6.  A popular engagement at the ends.

Authors:  Neal F Lue; Eun Young Yu; Ming Lei
Journal:  Nat Struct Mol Biol       Date:  2013-01       Impact factor: 15.369

Review 7.  Emerging roles of CST in maintaining genome stability and human disease.

Authors:  Jason A Stewart; Yilin Wang; Stephanie M Ackerson; Percy Logan Schuck
Journal:  Front Biosci (Landmark Ed)       Date:  2018-03-01

Review 8.  Human single-stranded DNA binding proteins are essential for maintaining genomic stability.

Authors:  Nicholas W Ashton; Emma Bolderson; Liza Cubeddu; Kenneth J O'Byrne; Derek J Richard
Journal:  BMC Mol Biol       Date:  2013-04-01       Impact factor: 2.946

9.  Structural insight into the DNA-binding mode of the primosomal proteins PriA, PriB, and DnaT.

Authors:  Yen-Hua Huang; Cheng-Yang Huang
Journal:  Biomed Res Int       Date:  2014-07-21       Impact factor: 3.411

10.  Coordinated interactions of multiple POT1-TPP1 proteins with telomere DNA.

Authors:  Mark Corriveau; Michael R Mullins; Diane Baus; Michael E Harris; Derek J Taylor
Journal:  J Biol Chem       Date:  2013-04-24       Impact factor: 5.486

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