Literature DB >> 21949186

Evolutionary remodeling of βγ-crystallins for domain stability at cost of Ca2+ binding.

Shashi Kumar Suman1, Amita Mishra1, Daddali Ravindra1, Lahari Yeramala1, Yogendra Sharma2.   

Abstract

The topologically similar βγ-crystallins that are prevalent in all kingdoms of life have evolved for high innate domain stability to perform their specialized functions. The evolution of stability and its control in βγ-crystallins that possess either a canonical (mostly from microorganisms) or degenerate (principally found in vertebrate homologues) Ca2+-binding motif is not known. Using equilibrium unfolding of βγ-crystallin domains (26 wild-type domains and their mutants) in apo- and holo-forms, we demonstrate the presence of a stability gradient across these members, which is attained by the choice of residues in the (N/D)(N/D)XX(S/T)S Ca2+-binding motif. The occurrence of a polar, hydrophobic, or Ser residue at the 1st, 3rd, or 5th position of the motif is likely linked to a higher domain stability. Partial conversion of a microbe-type domain (with a canonical Ca2+-binding motif) to a vertebrate-type domain (with a degenerate Ca2+-binding motif) by mutating serine to arginine/lysine disables the Ca2+-binding but significantly augments its stability. Conversely, stability is compromised when arginine (in a vertebrate-type disabled domain) is replaced by serine (as a microbe type). Our results suggest that such conversions were acquired as a strategy for desired stability in vertebrate members at the cost of Ca2+-binding. In a physiological context, we demonstrate that a mutation such as an arginine to serine (R77S) mutation in this motif of γ-crystallin (partial conversion to microbe-type), implicated in cataracts, decreases the domain stability. Thus, this motif acts as a "central tuning knob" for innate as well as Ca2+-induced gain in stability, incorporating a stability gradient across βγ-crystallin members critical for their specialized functions.

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Year:  2011        PMID: 21949186      PMCID: PMC3243557          DOI: 10.1074/jbc.M111.247890

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

1.  Crystal structure of the calcium-loaded spherulin 3a dimer sheds light on the evolution of the eye lens betagamma-crystallin domain fold.

Authors:  N J Clout; M Kretschmar; R Jaenicke; C Slingsby
Journal:  Structure       Date:  2001-02-07       Impact factor: 5.006

Review 2.  Lens crystallins and their microbial homologs: structure, stability, and function.

Authors:  R Jaenicke; C Slingsby
Journal:  Crit Rev Biochem Mol Biol       Date:  2001       Impact factor: 8.250

Review 3.  Myxobacteria: cell interactions, genetics, and development.

Authors:  D Kaiser; C Manoil; M Dworkin
Journal:  Annu Rev Microbiol       Date:  1979       Impact factor: 15.500

4.  The N-terminal domain of betaB2-crystallin resembles the putative ancestral homodimer.

Authors:  N J Clout; A Basak; K Wieligmann; O A Bateman; R Jaenicke; C Slingsby
Journal:  J Mol Biol       Date:  2000-12-01       Impact factor: 5.469

5.  Equilibrium protein folding-unfolding process involving multiple intermediates.

Authors:  Hui-Chih Hung; Yu-Hou Chen; Guang-Yaw Liu; Hwei-Jen Lee; Gu-Gang Chang
Journal:  Bull Math Biol       Date:  2003-07       Impact factor: 1.758

Review 6.  Ageing and vision: structure, stability and function of lens crystallins.

Authors:  Hans Bloemendal; Wilfried de Jong; Rainer Jaenicke; Nicolette H Lubsen; Christine Slingsby; Annette Tardieu
Journal:  Prog Biophys Mol Biol       Date:  2004-11       Impact factor: 3.667

7.  Myxococcus xanthus spore coat protein S may have a similar structure to vertebrate lens beta gamma-crystallins.

Authors:  G Wistow; L Summers; T Blundell
Journal:  Nature       Date:  1985 Jun 27-Jul 3       Impact factor: 49.962

8.  The molecular structure and stability of the eye lens: x-ray analysis of gamma-crystallin II.

Authors:  T Blundell; P Lindley; L Miller; D Moss; C Slingsby; I Tickle; B Turnell; G Wistow
Journal:  Nature       Date:  1981-02-26       Impact factor: 49.962

9.  Decoding the molecular design principles underlying Ca(2+) binding to βγ-crystallin motifs.

Authors:  Amita Mishra; Shashi Kumar Suman; Shanti Swaroop Srivastava; Rajan Sankaranarayanan; Yogendra Sharma
Journal:  J Mol Biol       Date:  2011-10-31       Impact factor: 5.469

10.  X-ray analysis of the eye lens protein gamma-II crystallin at 1.9 A resolution.

Authors:  G Wistow; B Turnell; L Summers; C Slingsby; D Moss; L Miller; P Lindley; T Blundell
Journal:  J Mol Biol       Date:  1983-10-15       Impact factor: 5.469

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  11 in total

Review 1.  Ca2+-binding motif of βγ-crystallins.

Authors:  Shanti Swaroop Srivastava; Amita Mishra; Bal Krishnan; Yogendra Sharma
Journal:  J Biol Chem       Date:  2014-02-24       Impact factor: 5.157

2.  Divalent Cations and the Divergence of βγ-Crystallin Function.

Authors:  Kyle W Roskamp; Natalia Kozlyuk; Suvrajit Sengupta; Jan C Bierma; Rachel W Martin
Journal:  Biochemistry       Date:  2019-11-01       Impact factor: 3.162

Review 3.  Functions of crystallins in and out of lens: roles in elongated and post-mitotic cells.

Authors:  Christine Slingsby; Graeme J Wistow
Journal:  Prog Biophys Mol Biol       Date:  2014-02-28       Impact factor: 3.667

4.  A mutation in the start codon of γ-crystallin D leads to nuclear cataracts in the Dahl SS/Jr-Ctr strain.

Authors:  Ashley C Johnson; Jonathan W Lee; Ashlyn C Harmon; Zaliya Morris; Xuexiang Wang; Jonathan Fratkin; John P Rapp; Elise Gomez-Sanchez; Michael R Garrett
Journal:  Mamm Genome       Date:  2013-02-13       Impact factor: 2.957

5.  Single-molecule Force Spectroscopy Reveals the Calcium Dependence of the Alternative Conformations in the Native State of a βγ-Crystallin Protein.

Authors:  Zackary N Scholl; Qing Li; Weitao Yang; Piotr E Marszalek
Journal:  J Biol Chem       Date:  2016-07-04       Impact factor: 5.157

6.  βγ-Crystallination Endows a Novel Bacterial Glycoside Hydrolase 64 with Ca2+-Dependent Activity Modulation.

Authors:  Bal Krishnan; Shanti Swaroop Srivastava; Venu Sankeshi; Rupsi Garg; Sudhakar Srivastava; Rajan Sankaranarayanan; Yogendra Sharma
Journal:  J Bacteriol       Date:  2019-11-05       Impact factor: 3.490

7.  The mutation V42M distorts the compact packing of the human gamma-S-crystallin molecule, resulting in congenital cataract.

Authors:  Venkata Pulla Rao Vendra; Sushil Chandani; Dorairajan Balasubramanian
Journal:  PLoS One       Date:  2012-12-21       Impact factor: 3.240

8.  Association properties and unfolding of a βγ-crystallin domain of a Vibrio-specific protein.

Authors:  Shashi Kumar Suman; Daddali Ravindra; Yogendra Sharma; Amita Mishra
Journal:  PLoS One       Date:  2013-01-22       Impact factor: 3.240

9.  Guanidine-HCl dependent structural unfolding of M-crystallin: fluctuating native state like topologies and intermolecular association.

Authors:  Ravi Pratap Barnwal; Geetika Agarwal; Kandala V R Chary
Journal:  PLoS One       Date:  2012-12-17       Impact factor: 3.240

10.  Functional Role of γ-Crystallin N in the Auditory Hindbrain.

Authors:  Heiner Hartwich; Elena Rosengauer; Lukas Rüttiger; Viviane Wilms; Sarah-Kristin Waterholter; Hans Gerd Nothwang
Journal:  PLoS One       Date:  2016-08-12       Impact factor: 3.240

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