Literature DB >> 21938516

Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta.

Masamichi Ide1, Hirofumi Ichinose, Hiroyuki Wariishi.   

Abstract

We explored the molecular diversity and functional capabilities of cytochrome P450 monooxygenases (P450s) from the brown-rot basidiomycete Postia placenta. Using bioinformatic and experimental data, we found 250 genes of P450s in the whole genome, including 60 putative allelic variants. Phylogenetic analysis revealed the presence of 42 families, including 18 novel families. Comparative phylogenetic analysis of P450s from P. placenta and the white-rot basidiomycete Phanerochaete chrysosporium suggested that vigorous gene duplication and molecular evolution occurred after speciation of basidiomycetes. Among the 250 gene models, 184 were isolated as full-length cDNA and transformed into Saccharomyces cerevisiae to construct a functional library in which recombinant P450s were co-expressed with yeast NADPH-P450 oxidoreductase. Using this library, the catalytic potentials of P450s against a wide variety of compounds were investigated. A functionomic survey allowed the discovery of novel catalytic properties of P. placenta P450s. The phylogenetic diversity of the CYP53 family in P. placenta was clear, and CYP53D2 is capable of converting stilbene derivatives. This is the first report of this peculiar function of the CYP53 family. Our increased understanding of the molecular and functional diversity of P450s in this fungus will facilitate comprehension of metabolic diversity in basidiomycetes and has future biotechnology applications.

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Year:  2011        PMID: 21938516     DOI: 10.1007/s00203-011-0753-2

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  29 in total

1.  Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola.

Authors:  Baojun Wu; Jill Gaskell; Benjamin W Held; Cristina Toapanta; Thu Vuong; Steven Ahrendt; Anna Lipzen; Jiwei Zhang; Jonathan S Schilling; Emma Master; Igor V Grigoriev; Robert A Blanchette; Dan Cullen; David S Hibbett
Journal:  Appl Environ Microbiol       Date:  2018-08-01       Impact factor: 4.792

Review 2.  Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?

Authors:  Steven L Kelly; Diane E Kelly
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-06       Impact factor: 6.237

3.  Phylogeny of Leptographium qinlingensis cytochrome P450 genes and transcription levels of six CYPs in response to different nutrition media or terpenoids.

Authors:  Lulu Dai; Jie Zheng; Jiaqi Ye; Hui Chen
Journal:  Arch Microbiol       Date:  2021-12-11       Impact factor: 2.552

4.  Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta.

Authors:  Jiwei Zhang; Gerald N Presley; Kenneth E Hammel; Jae-San Ryu; Jon R Menke; Melania Figueroa; Dehong Hu; Galya Orr; Jonathan S Schilling
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

Review 5.  Biocatalytic portfolio of Basidiomycota.

Authors:  Claudia Schmidt-Dannert
Journal:  Curr Opin Chem Biol       Date:  2016-01-23       Impact factor: 8.822

6.  Retracted and Republished from: "Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola"

Authors:  Baojun Wu; Jill Gaskell; Benjamin W Held; Cristina Toapanta; Thu V Vuong; Steven Ahrendt; Anna Lipzen; Jiwei Zhang; Jonathan S Schilling; Emma Master; Igor V Grigoriev; Robert A Blanchette; Dan Cullen; David S Hibbett
Journal:  Appl Environ Microbiol       Date:  2021-07-27       Impact factor: 4.792

7.  Transcriptome and proteome exploration to provide a resource for the study of Agrocybe aegerita.

Authors:  Man Wang; Bianli Gu; Jie Huang; Shuai Jiang; Yijie Chen; Yalin Yin; Yongfu Pan; Guojun Yu; Yamu Li; Barry Hon Cheung Wong; Yi Liang; Hui Sun
Journal:  PLoS One       Date:  2013-02-13       Impact factor: 3.240

8.  Genome sequence of the model medicinal mushroom Ganoderma lucidum.

Authors:  Shilin Chen; Jiang Xu; Chang Liu; Yingjie Zhu; David R Nelson; Shiguo Zhou; Chunfang Li; Lizhi Wang; Xu Guo; Yongzhen Sun; Hongmei Luo; Ying Li; Jingyuan Song; Bernard Henrissat; Anthony Levasseur; Jun Qian; Jianqin Li; Xiang Luo; Linchun Shi; Liu He; Li Xiang; Xiaolan Xu; Yunyun Niu; Qiushi Li; Mira V Han; Haixia Yan; Jin Zhang; Haimei Chen; Aiping Lv; Zhen Wang; Mingzhu Liu; David C Schwartz; Chao Sun
Journal:  Nat Commun       Date:  2012-06-26       Impact factor: 14.919

9.  Diversity and evolution of cytochrome P450 monooxygenases in Oomycetes.

Authors:  Mopeli Marshal Sello; Norventia Jafta; David R Nelson; Wanping Chen; Jae-Hyuk Yu; Mohammad Parvez; Ipeleng Kopano Rosinah Kgosiemang; Richie Monyaki; Seiso Caiphus Raselemane; Lehlohonolo Benedict Qhanya; Ntsane Trevor Mthakathi; Samson Sitheni Mashele; Khajamohiddin Syed
Journal:  Sci Rep       Date:  2015-07-01       Impact factor: 4.379

10.  Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes.

Authors:  Venkatesh Moktali; Jongsun Park; Natalie D Fedorova-Abrams; Bongsoo Park; Jaeyoung Choi; Yong-Hwan Lee; Seogchan Kang
Journal:  BMC Genomics       Date:  2012-10-04       Impact factor: 3.969

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