| Literature DB >> 21937472 |
Nikolaos Demiris1, David Lunn2, Linda D Sharples2.
Abstract
Recent studies of (cost-) effectiveness in cardiothoracic transplantation have required estimation of mean survival over the lifetime of the recipients. In order to calculate mean survival, the complete survivor curve is required but is often not fully observed, so that survival extrapolation is necessary. After transplantation, the hazard function is bathtub-shaped, reflecting latent competing risks which operate additively in overlapping time periods. The poly-Weibull distribution is a flexible parametric model that may be used to extrapolate survival and has a natural competing risks interpretation. In addition, treatment effects and subgroups can be modelled separately for each component of risk. We describe the model and develop inference procedures using freely available software. The methods are applied to two problems from cardiothoracic transplantation.Entities:
Keywords: Bayesian survival analysis; WinBUGS; heart lung transplantation; life years gained; poly-Weibull models; survival extrapolation
Mesh:
Year: 2011 PMID: 21937472 PMCID: PMC4456429 DOI: 10.1177/0962280211419645
Source DB: PubMed Journal: Stat Methods Med Res ISSN: 0962-2802 Impact factor: 3.021
Figure 1.Cumulative hazard estimates for lung transplant recipients.
Figure 2.Product-limit survival estimates for lung transplant recipients.
Posterior mean deviance for different models
| Model | Mean deviance |
|---|---|
| Weibull ( | 979.1 |
| Poly-Weibull ( | 966 |
| Poly-Weibull ( | 958.7 |
| Poly-Weibull ( | 958.2 |
| Poly-Weibull ( | 977.3 |
Posterior mean and 95% credible intervals for the different shapes (ν) and log-rate (β) parameters
| Parameter estimate (95% credible interval) | |
|---|---|
| β01 | −1.12 (−1.32, −0.93) |
| ν1 | 0.54 (0.45, 0.64) |
| β02 | −8.67 (−35.7, −5.46) |
| β12 | 2.42 (0.68, 29.9) |
| ν2 | 2.54 (1.71, 3.56) |
| Mean survival SL | 4.96 (4.32, 5.75) |
| Mean survival DL | 8.78 (6.14, 13.7) |
| Survival difference (DL–SL) | 3.83 (1.04, 8.72) |
Note: SL, single lung and DL, double lung. Subscript 1 (2) refers to the early (late) risk component.
Posterior mean and 95% credible intervals for the different IT effect parameters
| Parameters per hazard component | |||
|---|---|---|---|
| ν | β0 | β1 | |
| Unconstrained model | |||
| Early part | 0.289 (0.273, 0.305) | −1.45 (−1.51, −1.39) | 0.226 (0.127, 0.323) |
| Late part | 2.58 (2.36, 2.83) | −7.62 (−8.34, −6.98) | −0.195 (−0.475, 0.0830) |
| IT effect constrained to be positive | |||
| Early part | 0.288 (0.272, 0.304) | −1.44 (−1.50, −1.38) | 0.197 (0.10, 0.29) |
| Late part | 2.572 (2.353, 2.817) | −7.55 (−8.24, −6.93) | 0.067 (0.002, 0.23) |
Posterior summaries for the mean survival, the mean survival if the IT is reduced to 60 min and the corresponding LYG
| Lifetime functions | |||
|---|---|---|---|
| Mean survival | Mean survival at 60 min | LYG | |
| Unconstrained model | |||
| Mean | 12.1 | 11.2 | −0.901 |
| 95% CI | (11.6, 12.6) | (9.06, 14.0) | (−3.26, 2.04) |
| IT effect constrained to be positive | |||
| Mean | 11.9 | 13.6 | 1.66 |
| 95% CI | (11.5, 12.4) | (12.6, 15.6) | (0.892, 3.69) |
| IT effect = 0 | |||
| Mean | 11.9 | 13.0 | 1.09 |
| 95% CI | (11.5, 12.4) | (12.4, 13.7) | (0.646, 1.48) |
Note: CI, confidence interval.
Figure 3.The distribution of the observed ITs.