Literature DB >> 21936820

Non-homologous end-joining partners in a helical dance: structural studies of XLF-XRCC4 interactions.

Qian Wu1, Takashi Ochi, Dijana Matak-Vinkovic, Carol V Robinson, Dimitri Y Chirgadze, Tom L Blundell.   

Abstract

XRCC4 (X-ray cross-complementation group 4) and XLF (XRCC4-like factor) are two essential interacting proteins in the human NHEJ (non-homologous end-joining) pathway that repairs DNA DSBs (double-strand breaks). The individual crystal structures show that the dimeric proteins are homologues with protomers containing head domains and helical coiled-coil tails related by approximate two-fold symmetry. Biochemical, mutagenesis, biophysical and structural studies have identified the regions of interaction between the two proteins and suggested models for the XLF-XRCC4 complex. An 8.5 Å (1 Å = 0.1 nm) resolution crystal structure of XLF-XRCC4 solved by molecular replacement, together with gel filtration and nano-ESI (nano-electrospray ionization)-MS results, demonstrates that XLF and XRCC4 dimers interact through their head domains and form an alternating left-handed helical structure with polypeptide coiled coils and pseudo-dyads of individual XLF and XRCC4 dimers at right angles to the helical axis.

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Year:  2011        PMID: 21936820     DOI: 10.1042/BST0391387

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  37 in total

Review 1.  What Combined Measurements From Structures and Imaging Tell Us About DNA Damage Responses.

Authors:  Chris A Brosey; Zamal Ahmed; Susan P Lees-Miller; John A Tainer
Journal:  Methods Enzymol       Date:  2017-05-29       Impact factor: 1.600

Review 2.  Detection and repair of ionizing radiation-induced DNA double strand breaks: new developments in nonhomologous end joining.

Authors:  Chen Wang; Susan P Lees-Miller
Journal:  Int J Radiat Oncol Biol Phys       Date:  2013-02-20       Impact factor: 7.038

Review 3.  Repair of double-strand breaks by end joining.

Authors:  Kishore K Chiruvella; Zhuobin Liang; Thomas E Wilson
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-05-01       Impact factor: 10.005

4.  DNA-PKcs, Allostery, and DNA Double-Strand Break Repair: Defining the Structure and Setting the Stage.

Authors:  Dimitri Y Chirgadze; David B Ascher; Tom L Blundell; Bancinyane L Sibanda
Journal:  Methods Enzymol       Date:  2017-05-03       Impact factor: 1.600

Review 5.  Recognition and repair of chemically heterogeneous structures at DNA ends.

Authors:  Sara N Andres; Matthew J Schellenberg; Bret D Wallace; Percy Tumbale; R Scott Williams
Journal:  Environ Mol Mutagen       Date:  2014-08-11       Impact factor: 3.216

6.  Restoration of ATM Expression in DNA-PKcs-Deficient Cells Inhibits Signal End Joining.

Authors:  Jessica A Neal; Yao Xu; Masumi Abe; Eric Hendrickson; Katheryn Meek
Journal:  J Immunol       Date:  2016-02-26       Impact factor: 5.422

Review 7.  XLF/Cernunnos: An important but puzzling participant in the nonhomologous end joining DNA repair pathway.

Authors:  Vijay Menon; Lawrence F Povirk
Journal:  DNA Repair (Amst)       Date:  2017-08-18

Review 8.  Non-homologous end joining: emerging themes and unanswered questions.

Authors:  Sarvan Kumar Radhakrishnan; Nicholas Jette; Susan P Lees-Miller
Journal:  DNA Repair (Amst)       Date:  2014-02-26

9.  A role for XLF in DNA repair and recombination in human somatic cells.

Authors:  Farjana Jahan Fattah; Junghun Kweon; Yongbao Wang; Eu Han Lee; Yinan Kan; Natalie Lichter; Natalie Weisensel; Eric A Hendrickson
Journal:  DNA Repair (Amst)       Date:  2014-01-21

Review 10.  XRCC4 and XLF form long helical protein filaments suitable for DNA end protection and alignment to facilitate DNA double strand break repair.

Authors:  Brandi L Mahaney; Michal Hammel; Katheryn Meek; John A Tainer; Susan P Lees-Miller
Journal:  Biochem Cell Biol       Date:  2013-02-05       Impact factor: 3.626

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