Literature DB >> 21935722

Activity of transcription factor JACKDAW is essential for SHR/SCR-dependent activation of SCARECROW and MAGPIE and is modulated by reciprocal interactions with MAGPIE, SCARECROW and SHORT ROOT.

Hiromi Ogasawara1, Ryuji Kaimi, Joseph Colasanti, Akiko Kozaki.   

Abstract

Two GRAS family transcription factors, SHORT-ROOT (SHR) and SCARECROW (SCR), are required for ground tissue and quiescent center formation in Arabidopsis roots. The action of SHR and SCR is regulated by two INDETERMINATE DOMAIN (IDD) family proteins, JACKDAW (JKD) and MAGPIE (MGP). Although the reciprocal interaction of these transcription factors is considered to be involved in the modulation of SHR and SCR action by JKD and MGP, the underlying mechanism remains unclear. In this study, we use a transient assay with Arabidopsis culture cells to show that the physical interaction of these transcription factors modulate their transcriptional activity. Transient expression of LUC reporter genes with the proximal sequences upstream from the ATG codon of SCR and MGP in protoplasts were activated by JKD. Moreover, promoter activities were enhanced further by the addition of SHR and SCR to JKD, but not by the combination of SHR and SCR in the absence of JKD. Yeast one-hybrid analysis showed that JKD binds to the SCR and MGP promoter sequences, indicating the existence of another binding sequences of JKD different from the previously determined IDD binding sequence. Our findings suggest that JKD directly regulates SCR and MGP expression in cooperation with SHR, SCR and MGP.

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Year:  2011        PMID: 21935722     DOI: 10.1007/s11103-011-9826-5

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  26 in total

1.  The maize ID1 flowering time regulator is a zinc finger protein with novel DNA binding properties.

Authors:  Akiko Kozaki; Sarah Hake; Joseph Colasanti
Journal:  Nucleic Acids Res       Date:  2004-03-12       Impact factor: 16.971

2.  The UBX-regulated network in the haltere imaginal disc of D. melanogaster.

Authors:  Bradley M Hersh; Craig E Nelson; Samantha J Stoll; Jason E Norton; Thomas J Albert; Sean B Carroll
Journal:  Dev Biol       Date:  2006-11-10       Impact factor: 3.582

3.  Arabidopsis JACKDAW and MAGPIE zinc finger proteins delimit asymmetric cell division and stabilize tissue boundaries by restricting SHORT-ROOT action.

Authors:  David Welch; Hala Hassan; Ikram Blilou; Richard Immink; Renze Heidstra; Ben Scheres
Journal:  Genes Dev       Date:  2007-09-01       Impact factor: 11.361

4.  Intercellular movement of the putative transcription factor SHR in root patterning.

Authors:  K Nakajima; G Sena; T Nawy; P N Benfey
Journal:  Nature       Date:  2001-09-20       Impact factor: 49.962

5.  Non-cell-autonomous microRNA165 acts in a dose-dependent manner to regulate multiple differentiation status in the Arabidopsis root.

Authors:  Shunsuke Miyashima; Satoshi Koi; Takashi Hashimoto; Keiji Nakajima
Journal:  Development       Date:  2011-06       Impact factor: 6.868

6.  The TRANSPARENT TESTA GLABRA1 locus, which regulates trichome differentiation and anthocyanin biosynthesis in Arabidopsis, encodes a WD40 repeat protein.

Authors:  A R Walker; P A Davison; A C Bolognesi-Winfield; C M James; N Srinivasan; T L Blundell; J J Esch; M D Marks; J C Gray
Journal:  Plant Cell       Date:  1999-07       Impact factor: 11.277

7.  GL3 encodes a bHLH protein that regulates trichome development in arabidopsis through interaction with GL1 and TTG1.

Authors:  C T Payne; F Zhang; A M Lloyd
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

8.  Arabidopsis TRANSPARENT TESTA GLABRA2 is directly regulated by R2R3 MYB transcription factors and is involved in regulation of GLABRA2 transcription in epidermal differentiation.

Authors:  Tetsuya Ishida; Sayoko Hattori; Ryosuke Sano; Kayoko Inoue; Yumiko Shirano; Hiroaki Hayashi; Daisuke Shibata; Shusei Sato; Tomohiko Kato; Satoshi Tabata; Kiyotaka Okada; Takuji Wada
Journal:  Plant Cell       Date:  2007-08-31       Impact factor: 11.277

9.  A broad competence to respond to SHORT ROOT revealed by tissue-specific ectopic expression.

Authors:  Giovanni Sena; Jee W Jung; Philip N Benfey
Journal:  Development       Date:  2004-05-13       Impact factor: 6.868

10.  The GLABRA2 gene encodes a homeo domain protein required for normal trichome development in Arabidopsis.

Authors:  W G Rerie; K A Feldmann; M D Marks
Journal:  Genes Dev       Date:  1994-06-15       Impact factor: 11.361

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  25 in total

1.  SCARECROW has a SHORT-ROOT-independent role in modulating the sugar response.

Authors:  Hongchang Cui; Yueling Hao; Danyu Kong
Journal:  Plant Physiol       Date:  2012-02-06       Impact factor: 8.340

2.  Genetic networks involved in poplar root response to low nitrogen.

Authors:  Hairong Wei; Yordan Yordanov; Sapna Kumari; Tatyana Georgieva; Victor Busov
Journal:  Plant Signal Behav       Date:  2013-12-03

Review 3.  DELLA and SCL3 balance gibberellin feedback regulation by utilizing INDETERMINATE DOMAIN proteins as transcriptional scaffolds.

Authors:  Hideki Yoshida; Miyako Ueguchi-Tanaka
Journal:  Plant Signal Behav       Date:  2014

Review 4.  Phosphorylation regulates the activity of INDETERMINATE-DOMAIN (IDD/BIRD) proteins in response to diverse environmental conditions.

Authors:  Ronny Völz; Naganand Rayapuram; Heribert Hirt
Journal:  Plant Signal Behav       Date:  2019-07-17

5.  CBL-INTERACTING PROTEIN KINASE 9 regulates ammonium-dependent root growth downstream of IDD10 in rice (Oryza sativa).

Authors:  Yuan Hu Xuan; Vikranth Kumar; Xiao Han; Sung Hoon Kim; Jin Hee Jeong; Chul Min Kim; Yue Gao; Chang-Deok Han
Journal:  Ann Bot       Date:  2019-11-27       Impact factor: 4.357

6.  Arabidopsis BIRD Zinc Finger Proteins Jointly Stabilize Tissue Boundaries by Confining the Cell Fate Regulator SHORT-ROOT and Contributing to Fate Specification.

Authors:  Yuchen Long; Wouter Smet; Alfredo Cruz-Ramírez; Bas Castelijns; Wim de Jonge; Ari Pekka Mähönen; Benjamin P Bouchet; Gabino Sanchez Perez; Anna Akhmanova; Ben Scheres; Ikram Blilou
Journal:  Plant Cell       Date:  2015-03-31       Impact factor: 11.277

7.  NKD Transcription Factors Are Central Regulators of Maize Endosperm Development.

Authors:  Bryan C Gontarek; Anjanasree K Neelakandan; Hao Wu; Philip W Becraft
Journal:  Plant Cell       Date:  2016-11-28       Impact factor: 11.277

8.  Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.

Authors:  Yoshinori Hirano; Masahiro Nakagawa; Tomoe Suyama; Kohji Murase; Maya Shirakawa; Seiji Takayama; Tai-Ping Sun; Toshio Hakoshima
Journal:  Nat Plants       Date:  2017-02-17       Impact factor: 15.793

9.  Step by step evolution of Indeterminate Domain (IDD) transcriptional regulators: from algae to angiosperms.

Authors:  Santiago Prochetto; Renata Reinheimer
Journal:  Ann Bot       Date:  2020-06-19       Impact factor: 4.357

10.  Medicago truncatula ERN transcription factors: regulatory interplay with NSP1/NSP2 GRAS factors and expression dynamics throughout rhizobial infection.

Authors:  Marion R Cerri; Lisa Frances; Tom Laloum; Marie-Christine Auriac; Andreas Niebel; Giles E D Oldroyd; David G Barker; Joëlle Fournier; Fernanda de Carvalho-Niebel
Journal:  Plant Physiol       Date:  2012-10-17       Impact factor: 8.340

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