Literature DB >> 21931361

Metabolomics as a tool for cardiac research.

Julian L Griffin1, Helen Atherton, John Shockcor, Luigi Atzori.   

Abstract

Metabolomics represents a paradigm shift in metabolic research, away from approaches that focus on a limited number of enzymatic reactions or single pathways, to approaches that attempt to capture the complexity of metabolic networks. Additionally, the high-throughput nature of metabolomics makes it ideal to perform biomarker screens for diseases or follow drug efficacy. In this Review, we explore the role of metabolomics in gaining mechanistic insight into cardiac disease processes, and in the search for novel biomarkers. High-resolution NMR spectroscopy and mass spectrometry are both highly discriminatory for a range of pathological processes affecting the heart, including cardiac ischemia, myocardial infarction, and heart failure. We also discuss the position of metabolomics in the range of functional-genomic approaches, being complementary to proteomic and transcriptomic studies, and having subdivisions such as lipidomics (the study of intact lipid species). In addition to techniques that monitor changes in the total sizes of pools of metabolites in the heart and biofluids, the role of stable-isotope methods for monitoring fluxes through pathways is examined. The use of these novel functional-genomic tools to study metabolism provides a unique insight into cardiac disease progression.

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Year:  2011        PMID: 21931361     DOI: 10.1038/nrcardio.2011.138

Source DB:  PubMed          Journal:  Nat Rev Cardiol        ISSN: 1759-5002            Impact factor:   32.419


  106 in total

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Journal:  J Chromatogr A       Date:  2005-09-09       Impact factor: 4.759

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Authors:  Janusz H Hankiewicz; Natasha H Banke; Mariam Farjah; E Douglas Lewandowski
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7.  Metabonomic identification of novel biomarkers in doxorubicin cardiotoxicity and protective effect of the natural antioxidant oleuropein.

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10.  Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.

Authors:  Christian Gieger; Ludwig Geistlinger; Elisabeth Altmaier; Martin Hrabé de Angelis; Florian Kronenberg; Thomas Meitinger; Hans-Werner Mewes; H-Erich Wichmann; Klaus M Weinberger; Jerzy Adamski; Thomas Illig; Karsten Suhre
Journal:  PLoS Genet       Date:  2008-11-28       Impact factor: 5.917

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  82 in total

1.  Combining NMR and LC/MS Using Backward Variable Elimination: Metabolomics Analysis of Colorectal Cancer, Polyps, and Healthy Controls.

Authors:  Lingli Deng; Haiwei Gu; Jiangjiang Zhu; G A Nagana Gowda; Danijel Djukovic; E Gabriela Chiorean; Daniel Raftery
Journal:  Anal Chem       Date:  2016-08-01       Impact factor: 6.986

2.  Broad spectrum metabolomics for detection of abnormal metabolic pathways in a mouse model for retinitis pigmentosa.

Authors:  Ellen R Weiss; Shoji Osawa; Yubin Xiong; Suraj Dhungana; James Carlson; Susan McRitchie; Timothy R Fennell
Journal:  Exp Eye Res       Date:  2019-03-16       Impact factor: 3.467

Review 3.  Analysis of bacterial biofilms using NMR-based metabolomics.

Authors:  Bo Zhang; Robert Powers
Journal:  Future Med Chem       Date:  2012-06       Impact factor: 3.808

Review 4.  Can NMR solve some significant challenges in metabolomics?

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  J Magn Reson       Date:  2015-08-18       Impact factor: 2.229

5.  NMR metabolomic study of blood plasma in ischemic and ischemically preconditioned rats: an increased level of ketone bodies and decreased content of glycolytic products 24 h after global cerebral ischemia.

Authors:  Eva Baranovicova; Marian Grendar; Dagmar Kalenska; Anna Tomascova; Daniel Cierny; Jan Lehotsky
Journal:  J Physiol Biochem       Date:  2018-05-11       Impact factor: 4.158

6.  Cardiac resynchronization therapy induces adaptive metabolic transitions in the metabolomic profile of heart failure.

Authors:  Emirhan Nemutlu; Song Zhang; Yi-Zhou Xu; Andre Terzic; Li Zhong; Petras D Dzeja; Yong-Mei Cha
Journal:  J Card Fail       Date:  2015-04-22       Impact factor: 5.712

7.  Serum amine-based metabolites and their association with outcomes in primary prevention implantable cardioverter-defibrillator patients.

Authors:  Yiyi Zhang; Elena Blasco-Colmenares; Amy C Harms; Barry London; Indrani Halder; Madhurmeet Singh; Samuel C Dudley; Rebecca Gutmann; Eliseo Guallar; Thomas Hankemeier; Gordon F Tomaselli; Alan Cheng
Journal:  Europace       Date:  2015-10-25       Impact factor: 5.214

8.  Globally Optimized Targeted Mass Spectrometry: Reliable Metabolomics Analysis with Broad Coverage.

Authors:  Haiwei Gu; Ping Zhang; Jiangjiang Zhu; Daniel Raftery
Journal:  Anal Chem       Date:  2015-12-02       Impact factor: 6.986

9.  High-Throughput Metabolic Profiling of Soybean Leaves by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry.

Authors:  Ali Yilmaz; Heather L Rudolph; Jerod J Hurst; Troy D Wood
Journal:  Anal Chem       Date:  2015-12-23       Impact factor: 6.986

Review 10.  Metabolic phenotyping in clinical and surgical environments.

Authors:  Jeremy K Nicholson; Elaine Holmes; James M Kinross; Ara W Darzi; Zoltan Takats; John C Lindon
Journal:  Nature       Date:  2012-11-15       Impact factor: 49.962

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