Literature DB >> 21920360

The nucleosome remodeling factor.

Suehyb G Alkhatib1, Joseph W Landry.   

Abstract

An essential component of the chromatin remodeling machinery is NURF (Nucleosome Remodeling Factor), the founding member of the ISWI family of chromatin remodeling complexes. In vertebrates and invertebrates alike, NURF has many important functions in chromatin biology including regulating transcription, establishing boundary elements, and promoting higher order chromatin structure. Since NURF is essential to many aspects of chromatin biology, knowledge of its function is required to fully understand how the genome is regulated. This review will summarize what is currently known of its biological functions, conservation in the most prominent model organisms, biochemical functions as a nucleosome remodeling enzyme, and its possible relevance to human cancer.
Copyright © 2011 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21920360      PMCID: PMC4839296          DOI: 10.1016/j.febslet.2011.09.003

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  116 in total

1.  Fetal Alz-50 clone 1, a novel zinc finger protein, binds a specific DNA sequence and acts as a transcriptional regulator.

Authors:  K L Jordan-Sciutto; J M Dragich; J L Rhodes; R Bowser
Journal:  J Biol Chem       Date:  1999-12-03       Impact factor: 5.157

2.  Identification and characterization of BPTF, a novel bromodomain transcription factor.

Authors:  M H Jones; N Hamana; M Shimane
Journal:  Genomics       Date:  2000-01-01       Impact factor: 5.736

3.  Identification of 2 putative critical segments of 17q gain in neuroblastoma through integrative genomics.

Authors:  Jo Vandesompele; Evi Michels; Katleen De Preter; Björn Menten; Alexander Schramm; Angelika Eggert; Peter F Ambros; Valerie Combaret; Nadine Francotte; Francesca Antonacci; Anne De Paepe; Geneviève Laureys; Frank Speleman; Nadine Van Roy
Journal:  Int J Cancer       Date:  2008-03-01       Impact factor: 7.396

4.  The ISWI-containing NURF complex regulates the output of the canonical Wingless pathway.

Authors:  Haiyun Song; Chloe Spichiger-Haeusermann; Konrad Basler
Journal:  EMBO Rep       Date:  2009-08-28       Impact factor: 8.807

5.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

6.  Chromatin remodeling mediated by Drosophila GAGA factor and ISWI activates fushi tarazu gene transcription in vitro.

Authors:  M Okada; S Hirose
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

7.  Nucleosomal DNA regulates the core-histone-binding subunit of the human Hat1 acetyltransferase.

Authors:  A Verreault; P D Kaufman; R Kobayashi; B Stillman
Journal:  Curr Biol       Date:  1998-01-15       Impact factor: 10.834

8.  A tissue-specific, naturally occurring human SNF2L variant inactivates chromatin remodeling.

Authors:  Orr Barak; Maribeth A Lazzaro; Neil S Cooch; David J Picketts; Ramin Shiekhattar
Journal:  J Biol Chem       Date:  2004-08-13       Impact factor: 5.157

9.  Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin.

Authors:  G Mizuguchi; T Tsukiyama; J Wisniewski; C Wu
Journal:  Mol Cell       Date:  1997-12       Impact factor: 17.970

10.  ISWI is a RanGTP-dependent MAP required for chromosome segregation.

Authors:  Hideki Yokoyama; Sofia Rybina; Rachel Santarella-Mellwig; Iain W Mattaj; Eric Karsenti
Journal:  J Cell Biol       Date:  2009-12-14       Impact factor: 10.539

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  42 in total

Review 1.  Nucleosome remodeling and epigenetics.

Authors:  Peter B Becker; Jerry L Workman
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-09-01       Impact factor: 10.005

2.  Expansion of the ISWI chromatin remodeler family with new active complexes.

Authors:  Mariano Oppikofer; Tianyi Bai; Yutian Gan; Benjamin Haley; Peter Liu; Wendy Sandoval; Claudio Ciferri; Andrea G Cochran
Journal:  EMBO Rep       Date:  2017-08-11       Impact factor: 8.807

3.  Activation of Kaposi's sarcoma-associated herpesvirus (KSHV) by inhibitors of class III histone deacetylases: identification of sirtuin 1 as a regulator of the KSHV life cycle.

Authors:  Qiuhua Li; Meilan He; Fuchun Zhou; Fengchun Ye; Shou-Jiang Gao
Journal:  J Virol       Date:  2014-03-26       Impact factor: 5.103

4.  Functional interactions between NURF and Ctcf regulate gene expression.

Authors:  Zhijun Qiu; Carolyn Song; Navid Malakouti; Daniel Murray; Aymen Hariz; Mark Zimmerman; Derek Gygax; Aiman Alhazmi; Joseph W Landry
Journal:  Mol Cell Biol       Date:  2014-10-27       Impact factor: 4.272

Review 5.  Long non-coding RNAs: the tentacles of chromatin remodeler complexes.

Authors:  Audrey Vincent; Isabelle Van Seuningen; Bernadette Neve; Nicolas Jonckheere
Journal:  Cell Mol Life Sci       Date:  2020-10-01       Impact factor: 9.261

6.  Haploinsufficiency of the Chromatin Remodeler BPTF Causes Syndromic Developmental and Speech Delay, Postnatal Microcephaly, and Dysmorphic Features.

Authors:  Paweł Stankiewicz; Tahir N Khan; Przemyslaw Szafranski; Leah Slattery; Haley Streff; Francesco Vetrini; Jonathan A Bernstein; Chester W Brown; Jill A Rosenfeld; Surya Rednam; Sarah Scollon; Katie L Bergstrom; Donald W Parsons; Sharon E Plon; Marta W Vieira; Caio R D C Quaio; Wagner A R Baratela; Johanna C Acosta Guio; Ruth Armstrong; Sarju G Mehta; Patrick Rump; Rolph Pfundt; Raymond Lewandowski; Erica M Fernandes; Deepali N Shinde; Sha Tang; Juliane Hoyer; Christiane Zweier; André Reis; Carlos A Bacino; Rui Xiao; Amy M Breman; Janice L Smith; Nicholas Katsanis; Bret Bostwick; Bernt Popp; Erica E Davis; Yaping Yang
Journal:  Am J Hum Genet       Date:  2017-09-21       Impact factor: 11.025

7.  The hnRNP A1 homolog Hrb87F/Hrp36 is important for telomere maintenance in Drosophila melanogaster.

Authors:  Anand K Singh; Subhash C Lakhotia
Journal:  Chromosoma       Date:  2015-09-16       Impact factor: 4.316

8.  CHD4 Is a Peripheral Component of the Nucleosome Remodeling and Deacetylase Complex.

Authors:  Jason K K Low; Sarah R Webb; Ana P G Silva; Hinnerk Saathoff; Daniel P Ryan; Mario Torrado; Mattias Brofelth; Benjamin L Parker; Nicholas E Shepherd; Joel P Mackay
Journal:  J Biol Chem       Date:  2016-05-27       Impact factor: 5.157

9.  ZIC2-dependent OCT4 activation drives self-renewal of human liver cancer stem cells.

Authors:  Pingping Zhu; Yanying Wang; Lei He; Guanling Huang; Ying Du; Geng Zhang; Xinlong Yan; Pengyan Xia; Buqing Ye; Shuo Wang; Lu Hao; Jiayi Wu; Zusen Fan
Journal:  J Clin Invest       Date:  2015-08-31       Impact factor: 14.808

10.  BPTF Depletion Enhances T-cell-Mediated Antitumor Immunity.

Authors:  Kimberly Mayes; Suehyb G Alkhatib; Kristen Peterson; Aiman Alhazmi; Carolyn Song; Vivian Chan; Tana Blevins; Mark Roberts; Catherine I Dumur; Xiang-Yang Wang; Joseph W Landry
Journal:  Cancer Res       Date:  2016-09-20       Impact factor: 12.701

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