Literature DB >> 21920301

Uncovering new functions for microRNAs in Caenorhabditis elegans.

Allison L Abbott1.   

Abstract

In the nematode Caenorhabditis elegans, microRNA (miRNA) regulation of development was first observed in the striking abnormalities of lin-4 and let-7 loss of function mutants. However, after these first two miRNA mutant phenotypes were described, progress on the identification of miRNA functions in worms slowed considerably. Recent advances reveal new functions for miRNAs in embryonic and larval development as well as in the regulation of lifespan and stress response. Results from a combination of computational, biochemical, and genetic approaches have deepened our understanding of miRNA regulation of target mRNAs and support the hypothesis that miRNAs have an important role in ensuring the robustness of developmental and physiological pathways.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID： 21920301      PMCID： PMC3189681          DOI： 10.1016/j.cub.2011.07.027

Source DB:  PubMed          Journal:  Curr Biol        ISSN： 0960-9822            Impact factor:   10.834


  39 in total

Review 1.  Desperately seeking microRNA targets.

Authors:  Marshall Thomas; Judy Lieberman; Ashish Lal
Journal:  Nat Struct Mol Biol       Date:  2010-10       Impact factor: 15.369

2.  The landscape of C. elegans 3'UTRs.

Authors:  Marco Mangone; Arun Prasad Manoharan; Danielle Thierry-Mieg; Jean Thierry-Mieg; Ting Han; Sebastian D Mackowiak; Emily Mis; Charles Zegar; Michelle R Gutwein; Vishal Khivansara; Oliver Attie; Kevin Chen; Kourosh Salehi-Ashtiani; Marc Vidal; Timothy T Harkins; Pascal Bouffard; Yutaka Suzuki; Sumio Sugano; Yuji Kohara; Nikolaus Rajewsky; Fabio Piano; Kristin C Gunsalus; John K Kim
Journal:  Science       Date:  2010-06-03       Impact factor: 47.728

3.  MicroRNAs both promote and antagonize longevity in C. elegans.

Authors:  Alexandre de Lencastre; Zachary Pincus; Katherine Zhou; Masaomi Kato; Siu Sylvia Lee; Frank J Slack
Journal:  Curr Biol       Date:  2010-12-02       Impact factor: 10.834

4.  The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans.

Authors:  W Robert Shaw; Javier Armisen; Nicolas J Lehrbach; Eric A Miska
Journal:  Genetics       Date:  2010-04-26       Impact factor: 4.562

Review 5.  A parsimonious model for gene regulation by miRNAs.

Authors:  Sergej Djuranovic; Ali Nahvi; Rachel Green
Journal:  Science       Date:  2011-02-04       Impact factor: 47.728

6.  The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans.

Authors:  Alejandra M Clark; Leonard D Goldstein; Maya Tevlin; Simon Tavaré; Shai Shaham; Eric A Miska
Journal:  Nucleic Acids Res       Date:  2010-02-21       Impact factor: 16.971

7.  A quantitative targeted proteomics approach to validate predicted microRNA targets in C. elegans.

Authors:  Marko Jovanovic; Lukas Reiter; Paola Picotti; Vinzenz Lange; Erica Bogan; Benjamin A Hurschler; Cherie Blenkiron; Nicolas J Lehrbach; Xavier C Ding; Manuel Weiss; Sabine P Schrimpf; Eric A Miska; Helge Grosshans; Ruedi Aebersold; Michael O Hengartner
Journal:  Nat Methods       Date:  2010-09-12       Impact factor: 28.547

8.  A developmental timing switch promotes axon outgrowth independent of known guidance receptors.

Authors:  Katherine Olsson-Carter; Frank J Slack
Journal:  PLoS Genet       Date:  2010-08-05       Impact factor: 5.917

9.  Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs.

Authors:  Calvin H Jan; Robin C Friedman; J Graham Ruby; David P Bartel
Journal:  Nature       Date:  2010-11-17       Impact factor: 49.962

10.  A negative regulatory loop between microRNA and Hox gene controls posterior identities in Caenorhabditis elegans.

Authors:  Zhongying Zhao; Thomas J Boyle; Zongzhi Liu; John I Murray; William B Wood; Robert H Waterston
Journal:  PLoS Genet       Date:  2010-09-02       Impact factor: 5.917
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  20 in total

Review 1.  Physiological roles of long noncoding RNAs: insight from knockout mice.

Authors:  Lingjie Li; Howard Y Chang
Journal:  Trends Cell Biol       Date:  2014-07-09       Impact factor: 20.808

2.  Selective inhibition of miR-21 by phage display screened peptide.

Authors:  Debojit Bose; Smita Nahar; Manish Kumar Rai; Arjun Ray; Kausik Chakraborty; Souvik Maiti
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

3.  Period homolog LIN-42 regulates miRNA transcription to impact developmental timing.

Authors:  Priscilla M Van Wynsberghe; Amy E Pasquinelli
Journal:  Worm       Date:  2014-12-07

4.  Pleiotropic constraints, expression level, and the evolution of miRNA sequences.

Authors:  Richard Jovelin
Journal:  J Mol Evol       Date:  2013-10-08       Impact factor: 2.395

Review 5.  Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression.

Authors:  Qinyu Sun; Qinyu Hao; Kannanganattu V Prasanth
Journal:  Trends Genet       Date:  2018-02-07       Impact factor: 11.639

6.  The Period protein homolog LIN-42 negatively regulates microRNA biogenesis in C. elegans.

Authors:  Priscilla M Van Wynsberghe; Emily F Finnegan; Thomas Stark; Evan P Angelus; Kathryn E Homan; Gene W Yeo; Amy E Pasquinelli
Journal:  Dev Biol       Date:  2014-03-31       Impact factor: 3.582

7.  Two organobromines trigger lifespan, growth, reproductive and transcriptional changes in Caenorhabditis elegans.

Authors:  Nadine Saul; Nora Baberschke; Shumon Chakrabarti; Stephen R Stürzenbaum; Thora Lieke; Ralph Menzel; Adam Jonáš; Christian E W Steinberg
Journal:  Environ Sci Pollut Res Int       Date:  2014-05-17       Impact factor: 4.223

8.  Try to disarm the intruder or kill him!

Authors:  Adele Adamo; Adriana La Volpe
Journal:  Worm       Date:  2012-10-01

9.  The mir-51 family of microRNAs functions in diverse regulatory pathways in Caenorhabditis elegans.

Authors:  John L Brenner; Benedict J Kemp; Allison L Abbott
Journal:  PLoS One       Date:  2012-05-16       Impact factor: 3.240

10.  Identification of Dirofilaria immitis miRNA using illumina deep sequencing.

Authors:  Yan Fu; Jingchao Lan; Xuhang Wu; Deying Yang; Zhihe Zhang; Huaming Nie; Rong Hou; Runhui Zhang; Wanpeng Zheng; Yue Xie; Ning Yan; Zhi Yang; Chengdong Wang; Li Luo; Li Liu; Xiaobin Gu; Shuxian Wang; Xuerong Peng; Guangyou Yang
Journal:  Vet Res       Date:  2013-01-18       Impact factor: 3.683
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