Literature DB >> 21914865

Draft genome sequence of Lactobacillus malefermentans KCTC 3548.

Dong-Wook Kim1, Sang-Haeng Choi, Aram Kang, Seong-Hyeuk Nam, Dae-Soo Kim, Ryong Nam Kim, Aeri Kim, Hong-Seog Park.   

Abstract

We announce the draft genome sequence of the type strain Lactobacillus malefermentans KCTC 3548 (2,003,922 bp, with a G+C content of 41.1%), which is one of the most prevalent lactic acid bacteria present during the manufacturing process of beer; the genome consists of 172 large contigs (>100 bp in size). All of the contigs were assembled by using Newbler Assembler 2.3 (454 Life Science).

Entities:  

Mesh：

Year:  2011        PMID： 21914865      PMCID： PMC3187466          DOI： 10.1128/JB.05710-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  Effect of consumption of red wine, spirits, and beer on serum homocysteine.

Authors:  M S van der Gaag; J B Ubbink; P Sillanaukee; S Nikkari; H F Hendriks
Journal:  Lancet       Date:  2000-04-29       Impact factor: 79.321

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

5.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Authors:  R D Fleischmann; M D Adams; O White; R A Clayton; E F Kirkness; A R Kerlavage; C J Bult; J F Tomb; B A Dougherty; J M Merrick
Journal:  Science       Date:  1995-07-28       Impact factor: 47.728

6.  The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata.

Authors:  Konstantinos Liolios; I-Min A Chen; Konstantinos Mavromatis; Nektarios Tavernarakis; Philip Hugenholtz; Victor M Markowitz; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2009-11-13       Impact factor: 16.971

7.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

8.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  8 in total
  1 in total

1.  Unique substrate specificity of purine nucleoside phosphorylases from Thermus thermophilus.

Authors:  Fumiaki Tomoike; Seiki Kuramitsu; Ryoji Masui
Journal:  Extremophiles       Date:  2013-04-02       Impact factor: 2.395
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.