Literature DB >> 21894258

Structure-based drug design of a new chemical class of small molecules active against influenza A nucleoprotein in vitro and in vivo.

Peter Fedichev1, Roman Timakhov, Tim Pyrkov, Evgeny Getmantsev, Andrey Vinnik.   

Abstract

We report preliminary results and a summary of a bottom-up approach to identify new, active, nontoxic, small-molecule antivirals designed to have а novel mechanism of action. We employed the procedure to identify 3-mercapto-1,2,4-triazoles derivatives as potential NP inhibitors in silico and subsequently demonstrated the in vitro efficacy of the molecules against various strains of the influenza A virus. The most efficacious compounds were successfully tested in an in vivo influenza challenge experiment.

Entities:  

Year:  2011        PMID: 21894258      PMCID: PMC3153361          DOI: 10.1371/currents.RRN1253

Source DB:  PubMed          Journal:  PLoS Curr        ISSN: 2157-3999


  30 in total

Review 1.  Force fields for protein simulations.

Authors:  Jay W Ponder; David A Case
Journal:  Adv Protein Chem       Date:  2003

2.  Development and testing of a general amber force field.

Authors:  Junmei Wang; Romain M Wolf; James W Caldwell; Peter A Kollman; David A Case
Journal:  J Comput Chem       Date:  2004-07-15       Impact factor: 3.376

3.  Oseltamivir's adverse reactions: Fifty sudden deaths may be related to central suppression.

Authors:  Rokuro Hama
Journal:  BMJ       Date:  2007-07-14

4.  Ion channel activity of influenza A virus M2 protein: characterization of the amantadine block.

Authors:  C Wang; K Takeuchi; L H Pinto; R A Lamb
Journal:  J Virol       Date:  1993-09       Impact factor: 5.103

5.  O(NlogN) continuous electrostatics method for fast calculation of solvation energies of biomolecules.

Authors:  P O Fedichev; E G Getmantsev; L I Menshikov
Journal:  J Comput Chem       Date:  2010-12-31       Impact factor: 3.376

6.  Ligand binding affinity prediction by linear interaction energy methods.

Authors:  T Hansson; J Marelius; J Aqvist
Journal:  J Comput Aided Mol Des       Date:  1998-01       Impact factor: 3.686

7.  Application of a novel in silico high-throughput screen to identify selective inhibitors for protein-protein interactions.

Authors:  Catherine Joce; Joshua A Stahl; Mitesh Shridhar; Mark R Hutchinson; Linda R Watkins; Peter O Fedichev; Hang Yin
Journal:  Bioorg Med Chem Lett       Date:  2010-07-30       Impact factor: 2.823

8.  [In vitro and in vivo efficacy of Ingavirin against strains of pandemic influenza virus A(H1N1/09)v].

Authors:  L N Shishkina; V E Nebol'sin; A S Kabanov; M O Skarnovich; N A Mazurkova; A A Sergeev; O A Serova; E A Stavskiĭ; I G Drozdov
Journal:  Zh Mikrobiol Epidemiol Immunobiol       Date:  2011 Mar-Apr

9.  Molecular detection and typing of influenza viruses: are we ready for an influenza pandemic?

Authors:  W G Mackay; A M van Loon; M Niedrig; A Meijer; B Lina; H G M Niesters
Journal:  J Clin Virol       Date:  2008-03-24       Impact factor: 3.168

10.  PocketPicker: analysis of ligand binding-sites with shape descriptors.

Authors:  Martin Weisel; Ewgenij Proschak; Gisbert Schneider
Journal:  Chem Cent J       Date:  2007-03-13       Impact factor: 4.215

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  8 in total

Review 1.  Recent progress in structure-based anti-influenza drug design.

Authors:  Juan Du; Timothy A Cross; Huan-Xiang Zhou
Journal:  Drug Discov Today       Date:  2012-06-13       Impact factor: 7.851

Review 2.  Influenza A Virus Nucleoprotein: A Highly Conserved Multi-Functional Viral Protein as a Hot Antiviral Drug Target.

Authors:  Yanmei Hu; Hannah Sneyd; Raphael Dekant; Jun Wang
Journal:  Curr Top Med Chem       Date:  2017       Impact factor: 3.295

3.  Structure-based discovery of the novel antiviral properties of naproxen against the nucleoprotein of influenza A virus.

Authors:  Nathalie Lejal; Bogdan Tarus; Edwige Bouguyon; Sylvie Chenavas; Nicolas Bertho; Bernard Delmas; Rob W H Ruigrok; Carmelo Di Primo; Anny Slama-Schwok
Journal:  Antimicrob Agents Chemother       Date:  2013-03-04       Impact factor: 5.191

Review 4.  New-generation screening assays for the detection of anti-influenza compounds targeting viral and host functions.

Authors:  Grant Beyleveld; Kris M White; Juan Ayllon; Megan L Shaw
Journal:  Antiviral Res       Date:  2013-08-06       Impact factor: 5.970

5.  Discovery of a small-molecule antiviral targeting the HIV-1 matrix protein.

Authors:  Isaac Zentner; Luz-Jeannette Sierra; Lina Maciunas; Andrei Vinnik; Peter Fedichev; Marie K Mankowski; Roger G Ptak; Julio Martín-García; Simon Cocklin
Journal:  Bioorg Med Chem Lett       Date:  2012-11-29       Impact factor: 2.823

6.  In silico structural elucidation of the rabies RNA-dependent RNA polymerase (RdRp) toward the identification of potential rabies virus inhibitors.

Authors:  Duangnapa Kiriwan; Kiattawee Choowongkomon
Journal:  J Mol Model       Date:  2021-05-24       Impact factor: 1.810

7.  Two birds with one stone? Possible dual-targeting H1N1 inhibitors from traditional Chinese medicine.

Authors:  Su-Sen Chang; Hung-Jin Huang; Calvin Yu-Chian Chen
Journal:  PLoS Comput Biol       Date:  2011-12-22       Impact factor: 4.475

Review 8.  The Influenza Virus Polymerase Complex: An Update on Its Structure, Functions, and Significance for Antiviral Drug Design.

Authors:  Annelies Stevaert; Lieve Naesens
Journal:  Med Res Rev       Date:  2016-08-29       Impact factor: 12.944

  8 in total

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