Literature DB >> 21889442

Rectification of the channelrhodopsin early conductance.

Dietrich Gradmann1, André Berndt, Franziska Schneider, Peter Hegemann.   

Abstract

We analyzed the nonlinear current-voltage relationships of the early conducting state of channelrhodopsin-2 expressed in Xenopus oocytes and human embryonic kidney cells with respect to changes of the electrochemical gradients of H(+), Na(+)/K(+), and Ca(2+)/Mg(2+). Several models were tested for wild-type ChR2 and mutations at positions E90, E123, H134, and T159. Voltage-gating was excluded as cause for the nonlinearity. However, a general enzyme kinetic model with one predominant binding site yielded good fits throughout. The empty site with an apparent charge number of about -0.3 and strong external cation binding causes some inward rectification of the uniport function. Additional inward rectification is due to asymmetric competition from outside between the transported ion species. Significant improvement of the fits was achieved by introducing an elastic voltage-divider formed by the voltage-sensitive barriers.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21889442      PMCID: PMC3325117          DOI: 10.1016/j.bpj.2011.07.040

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

1.  Channelrhodopsin-1: a light-gated proton channel in green algae.

Authors:  Georg Nagel; Doris Ollig; Markus Fuhrmann; Suneel Kateriya; Anna Maria Musti; Ernst Bamberg; Peter Hegemann
Journal:  Science       Date:  2002-06-28       Impact factor: 47.728

Review 2.  Mechanism of rectification in inward-rectifier K+ channels.

Authors:  Zhe Lu
Journal:  Annu Rev Physiol       Date:  2004       Impact factor: 19.318

3.  High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels.

Authors:  André Berndt; Philipp Schoenenberger; Joanna Mattis; Kay M Tye; Karl Deisseroth; Peter Hegemann; Thomas G Oertner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-19       Impact factor: 11.205

4.  A permeation theory for single-file ion channels: one- and two-step models.

Authors:  Peter Hugo Nelson
Journal:  J Chem Phys       Date:  2011-04-28       Impact factor: 3.488

5.  Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.

Authors:  M T Facciotti; S Rouhani; F T Burkard; F M Betancourt; K H Downing; R B Rose; G McDermott; R M Glaeser
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

6.  A transient calcium-dependent chloride current in the immature Xenopus oocyte.

Authors:  M E Barish
Journal:  J Physiol       Date:  1983-09       Impact factor: 5.182

7.  Interpretation of current-voltage relationships for "active" ion transport systems: I. Steady-state reaction-kinetic analysis of class-I mechanisms.

Authors:  U P Hansen; D Gradmann; D Sanders; C L Slayman
Journal:  J Membr Biol       Date:  1981       Impact factor: 1.843

8.  Studies in irreversible thermodynamics. IV. Diagrammatic representation of steady state fluxes for unimolecular systems.

Authors:  T L Hill
Journal:  J Theor Biol       Date:  1966-04       Impact factor: 2.691

9.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

10.  Ionic blockage of sodium channels in nerve.

Authors:  A M Woodhull
Journal:  J Gen Physiol       Date:  1973-06       Impact factor: 4.086

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  26 in total

1.  Structural model of channelrhodopsin.

Authors:  Hiroshi C Watanabe; Kai Welke; Franziska Schneider; Satoshi Tsunoda; Feng Zhang; Karl Deisseroth; Peter Hegemann; Marcus Elstner
Journal:  J Biol Chem       Date:  2012-01-11       Impact factor: 5.157

2.  Gating mechanisms of a natural anion channelrhodopsin.

Authors:  Oleg A Sineshchekov; Elena G Govorunova; Hai Li; John L Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

3.  A simple recipe for setting up the flux equations of cyclic and linear reaction schemes of ion transport with a high number of states: The arrow scheme.

Authors:  Ulf-Peter Hansen; Oliver Rauh; Indra Schroeder
Journal:  Channels (Austin)       Date:  2015-12-08       Impact factor: 2.581

4.  Characterization of a highly efficient blue-shifted channelrhodopsin from the marine alga Platymonas subcordiformis.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Hai Li; Roger Janz; John L Spudich
Journal:  J Biol Chem       Date:  2013-08-30       Impact factor: 5.157

Review 5.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

6.  Ion selectivity and competition in channelrhodopsins.

Authors:  Franziska Schneider; Dietrich Gradmann; Peter Hegemann
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

7.  Multidimensional screening yields channelrhodopsin variants having improved photocurrent and order-of-magnitude reductions in calcium and proton currents.

Authors:  Yong Ku Cho; Demian Park; Aimei Yang; Fei Chen; Amy S Chuong; Nathan C Klapoetke; Edward S Boyden
Journal:  J Biol Chem       Date:  2019-01-04       Impact factor: 5.157

8.  Color-tuned channelrhodopsins for multiwavelength optogenetics.

Authors:  Matthias Prigge; Franziska Schneider; Satoshi P Tsunoda; Carrie Shilyansky; Jonas Wietek; Karl Deisseroth; Peter Hegemann
Journal:  J Biol Chem       Date:  2012-07-27       Impact factor: 5.157

9.  Transmembrane domain three contributes to the ion conductance pathway of channelrhodopsin-2.

Authors:  Olga Gaiko; Robert E Dempski
Journal:  Biophys J       Date:  2013-03-19       Impact factor: 4.033

Review 10.  Cardiac optogenetics.

Authors:  Emilia Entcheva
Journal:  Am J Physiol Heart Circ Physiol       Date:  2013-03-01       Impact factor: 4.733

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