| Literature DB >> 21887347 |
Chun Zhao1, Jing Dong, Tao Jiang, Zhonghua Shi, Bin Yu, Yunlong Zhu, Daozhen Chen, Junrong Xu, Ran Huo, Juncheng Dai, Yankai Xia, Shiyang Pan, Zhibin Hu, Jiahao Sha.
Abstract
BACKGROUND: Gestational diabetes mellitus (GDM) is one type of diabetes that presents during pregnancy and significantly increases the risk of a number of adverse consequences for the fetus and mother. The microRNAs (miRNA) have recently been demonstrated to abundantly and stably exist in serum and to be potentially disease-specific. However, no reported study investigates the associations between serum miRNA and GDM. METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2011 PMID: 21887347 PMCID: PMC3161072 DOI: 10.1371/journal.pone.0023925
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Characteristics of the study population.
| Variable | Discovery Stage |
| Internal Validation |
| External Validation (Wuxi) |
| External Validation (Changzhou) |
| ||||
| case | Control | case | control | case | control | case | control | |||||
| Age(years) | 28.79±2.21 | 29.46±1.89 | 0.267 | 29.21±1.61 | 28.57±1.80 | 0.074 | 26.88±1.96 | 26.88±2.06 | 1 | 27.94±2.72 | 26.75±1.65 | 0.146 |
| BMI(kg2/m) | 21.44±1.70 | 21.9±1.81 | 0.374 | 21.50±1.85 | 21.31±2.17 | 0.638 | 20.62±1.25 | 20.73±1.37 | 0.811 | 21.95±1.99 | 22.13±1.93 | 0.794 |
| Gestational Week | 17.40±0.70 | 17.16±0.79 | 0.262 | 17.09±0.78 | 17.23±0.76 | 0.373 | 17.55±0.92 | 17.53±0.93 | 0.935 | 16.95±0.85 | 17.17±0.88 | 0.470 |
| Serum glucose | 5.30±0.90 | 4.76±0.90 | 0.042 | 5.52±1.06 | 4.96±1.20 | 0.041 | 5.52±2.09 | 5.35±1.31 | 0.772 | 5.31±1.99 | 5.23±0.48 | 0.875 |
| OGTT | ||||||||||||
| 2+ | 17 | 24 | 14 | 8 | ||||||||
| 3+ | 7 | 11 | 2 | 4 | ||||||||
| 4+ | 0 | 1 | 0 | 4 | ||||||||
| Gravidity | ||||||||||||
| 1 | 14 | 12 | 0.925 | 20 | 20 | 0.351 | 10 | 10 | 0.470 | 11 | 11 | 1.000 |
| 2 | 7 | 8 | 8 | 13 | 4 | 6 | 4 | 5 | ||||
| > = 3 | 3 | 4 | 8 | 3 | 2 | 0 | 1 | 0 | ||||
Student's t test.
Fisher's exact test.
Results of 11 miRNAs in the discovery stage.
| miRNA | GDM | No GDM | ΔΔCT |
| ||||||||
| N | ΔCT | mean | SD | median | N | ΔCT | mean | SD | median | |||
| hsa-miR-1 | 24 | 6.336 | 4.03*10-5 | 3.59*10-5 | 2.98*10-5 | 24 | 2.781 | 4.92*10-5 | 4.67*10-5 | 3.37*10-5 | 3.894 | 0.463 |
| hsa-miR-125b | 24 | 9.248 | 5.95*10-5 | 3.25*10-5 | 5.55*10-5 | 24 | 4.73 | 7.73*10-5 | 3.75*10-5 | 7.07*10-5 | 4.857 | 0.085 |
|
| 24 | 7.27 | 11.98*10-5 | 10.47*10-5 | 8.75*10-5 | 24 | 3.77 | 17.88*10-5 | 9.00*10-5 | 16.24*10-5 | 3.839 | 0.042 |
|
| 24 | 7.325 | 11.20*10-4 | 8.18*10-4 | 8.33*10-4 | 24 | 3.766 | 17.01*10-4 | 9.89*10-4 | 14.38*10-4 | 3.898 | 0.032 |
| hsa-miR-203 | 24 | 8.197 | 1.80*10-5 | 1.15*10-5 | 1.44*10-5 | 24 | 4.757 | 2.55*10-5 | 1.58*10-5 | 2.10*10-5 | 3.779 | 0.065 |
|
| 24 | 3.203 | 2.43*10-3 | 1.72*10-3 | 2.02*10-3 | 24 | 0.708 | 3.76*10-3 | 2.57*10-3 | 3.26*10-3 | 2.834 | 0.041 |
| hsa-miR-378 | 24 | 8.353 | 10.07*10-4 | 5.77*10-4 | 9.00*10-4 | 24 | 5.214 | 11.17*10-4 | 6.86*10-4 | 9.82*10-4 | 3.478 | 0.550 |
| hsa-miR-518d-3p | 24 | 7.26 | 8.22*10-6 | 9.79*10-6 | 4.43*10-6 | 24 | 3.814 | 8.68*10-6 | 8.01*10-6 | 5.49*10-6 | 3.785 | 0.860 |
| hsa-miR-632 | 24 | 7.348 | 1.68*10-4 | 1.05*10-4 | 1.44*10-4 | 24 | 4.205 | 2.07*10-4 | 1.12*10-4 | 1.80*10-4 | 3.482 | 0.226 |
| hsa-miR-923 | 24 | 3.324 | 2.70*10-3 | 2.84*10-3 | 1.62*10-3 | 24 | 0.077 | 3.48*10-3 | 6.25*10-3 | 1.45*10-3 | 3.586 | 0.584 |
| hsa-miR-99a | 24 | 9.257 | 7.07*10-5 | 3.40*10-5 | 6.03*10-5 | 24 | 5.785 | 8.88*10-5 | 4.66*10-5 | 8.44*10-5 | 3.811 | 0.131 |
TLDA results of 24 pooled samples, ΔCT = CTsample−CTRNU6B.
ΔΔCT = ΔCTcase−ΔCTcontrol−ΔCTCel-39 from TLDA data.
Student's t test from individual assay data.
Figure 1Expression levels of miRNAs.
DS: discovery stage; IS: internal validation stage; WX: Wuxi; CZ: Changzhou Three serum miRNAs were quantified by qRT-PCR in patients with subsequent GDM and matched controls (n = 24, 36, 16 and 16 each for DS, IS, WX and CZ, respectively). The Box-whisker Plot represented the relative expression levels of miRNAs that were determined by the equation 2−ΔCT, in which ΔCT = CT sample-CT cel-39. The bottom and top of the box were the 5th and 95th percentiles, and the band near the middle of the box was the 50th percentile of the relative expression levels of miRNAs. Any data beyond these whiskers were shown as points.
Expression of the identified three miRNAs in the validation stages.
| Validation stage | miRNAs | GDM | No GDM |
| ||||||
| N | Mean | SD | Median | N | Mean | SD | Median | |||
| Internal validation | mir-132 | 36 | 12.15*10-5 | 9.36*10-5 | 9.85*10-5 | 36 | 21.24*10-5 | 23.41*10-5 | 13.34*10-5 | 0.034 |
| mir-29a | 36 | 11.11*10-4 | 8.02*10-4 | 7.89*10-4 | 36 | 17.06*10-4 | 15.54*10-4 | 13.67*10-4 | 0.045 | |
| mir-222 | 36 | 2.32*10-3 | 1.54*10-3 | 1.90*10-3 | 36 | 3.51*10-3 | 2.45*10-3 | 2.97*10-3 | 0.016 | |
| External validation | mir-132 | 16 | 3.23*10-4 | 2.56*10-4 | 2.35*10-4 | 16 | 4.32*10-4 | 2.56*10-4 | 4.00*10-4 | 0.235 |
| Wuxi | mir-29a | 16 | 19.66*10-4 | 9.69*10-4 | 17.97*10-4 | 16 | 36.74*10-4 | 15.85*10-4 | 33.35*10-4 | 0.001 |
| mir-222 | 16 | 5.72*10-3 | 2.71*10-3 | 5.27*10-3 | 16 | 8.73*10-3 | 3.91*10-3 | 8.02*10-3 | 0.017 | |
| External validation | mir-132 | 16 | 14.62*10-5 | 7.71*10-5 | 13.02*10-5 | 16 | 27.55*10-5 | 11.75*10-5 | 26.27*10-5 | 0.001 |
| Changzhou | mir-29a | 16 | 11.39*10-4 | 5.18*10-4 | 10.31*10-4 | 16 | 19.61*10-4 | 7.16*10-4 | 18.44*10-4 | 0.001 |
| mir-222 | 16 | 3.10*10-3 | 1.45*10-3 | 2.94*10-3 | 16 | 4.48*10-3 | 1.69*10-3 | 4.36*10-3 | 0.019 | |
Expression levels were relative to CTCel-39.
Student's t test.
Figure 2A. Expression of miR-29a in HepG2 cells transfected with 100 nM anti-miR-29a, anti-miR-neg or mock to determine the knockdown efficiency of anti-miR-29a. ** P<0.01. B. Western blots for Insig1 or tubulin using protein extracts from HepG2 cells transfected with 100 nM anti-miR-29a or anti-miR-neg. C. Expression of PCK2 in HepG2 cells transfected with 100 nM anti-miR-29a, anti-miR-neg to determine the regulation of miR-29a on the expression of PCK2. Data represented three independent experiments ±S.E.M. with n = 3. ** P<0.01.