Literature DB >> 21880842

Genomic characterization of a novel human adenovirus type 31 recombinant in the hexon gene.

Yuki Matsushima1, Hideaki Shimizu1, Tung Gia Phan2, Hiroshi Ushijima3.   

Abstract

A novel human recombinant adenovirus of species A (HAdV-A31 MZ) was isolated from a patient with acute gastroenteritis in Japan. The complete genome of HAdV-A31 strain MZ contains 33 776 bp. Analysis of the hexon gene of HAdV-A31 MZ indicated that its hexon sequence is the result of a genetic recombination between those of HAdV-A31 and a close relative to HAdV-A12. The recombination sites were found around the border of hypervariable loops 1 and 2 in the hexon gene, which are the most important determinants for virus neutralization. Loops 1 and 2 of this virus were genetically related to HAdV-A12, whereas all other parts of the genome were highly similar to HAdV-A31. In order to understand the evolution of adenoviruses correctly and to avoid misidentification of HAdV types, we recommend characterizing not only the hexon gene, but also the penton base and fiber genes.

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Year:  2011        PMID： 21880842     DOI： 10.1099/vir.0.034744-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN： 0022-1317            Impact factor:   3.891


  18 in total

1.  Overreliance on the hexon gene, leading to misclassification of human adenoviruses.

Authors:  Gurdeep Singh; Christopher M Robinson; Shoaleh Dehghan; Timothy Schmidt; Donald Seto; Morris S Jones; David W Dyer; James Chodosh
Journal:  J Virol       Date:  2012-02-01       Impact factor: 5.103

2.  Interregional Coevolution Analysis Revealing Functional and Structural Interrelatedness between Different Genomic Regions in Human Mastadenovirus D.

Authors:  Gabriel Gonzalez; Kanako O Koyanagi; Koki Aoki; Hidemi Watanabe
Journal:  J Virol       Date:  2015-04-01       Impact factor: 5.103

3.  Homologous recombination in E3 genes of human adenovirus species D.

Authors:  Gurdeep Singh; Christopher M Robinson; Shoaleh Dehghan; Morris S Jones; David W Dyer; Donald Seto; James Chodosh
Journal:  J Virol       Date:  2013-09-11       Impact factor: 5.103

4.  Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen.

Authors:  Shoaleh Dehghan; Jason Seto; Morris S Jones; David W Dyer; James Chodosh; Donald Seto
Journal:  Virology       Date:  2013-10-08       Impact factor: 3.616

5.  Detection of Human Enteric Viruses in French Polynesian Wastewaters, Environmental Waters and Giant Clams.

Authors:  Laetitia Kaas; Leslie Ogorzaly; Gaël Lecellier; Véronique Berteaux-Lecellier; Henry-Michel Cauchie; Jérémie Langlet
Journal:  Food Environ Virol       Date:  2018-11-13       Impact factor: 2.778

6.  Isolation and molecular characterization of Adenovirus in suspected acute flaccid paralysis patients: A preliminary report from Pakistan.

Authors:  Zainab Khattak; Aamer Ali Shah; Syed Sohail Zahoor Zaidi; Nayab Mahmood; Muhammad Masroor Alam; Salmaan Sharif; Ribqa Akhtar; Yasir Arshid; Muhammad Suleman Rana
Journal:  Arch Virol       Date:  2022-01-04       Impact factor: 2.574

7.  Computational analysis of four human adenovirus type 4 genomes reveals molecular evolution through two interspecies recombination events.

Authors:  Shoaleh Dehghan; Jason Seto; Elizabeth B Liu; Michael P Walsh; David W Dyer; James Chodosh; Donald Seto
Journal:  Virology       Date:  2013-06-10       Impact factor: 3.616

8.  Structural Determinants within the Adenovirus Early Region 1A Protein Spacer Region Necessary for Tumorigenesis.

Authors:  David P Molloy; Roger J Grand
Journal:  J Virol       Date:  2020-10-14       Impact factor: 5.103

9.  Novel human adenovirus strain, Bangladesh.

Authors:  Yuki Matsushima; Hideaki Shimizu; Atsuko Kano; Etsuko Nakajima; Yoko Ishimaru; Shuvra Kanti Dey; Yuki Watanabe; Fuyuka Adachi; Keiichiro Suzuki; Kohnosuke Mitani; Tsuguto Fujimoto; Tung Gia Phan; Hiroshi Ushijima
Journal:  Emerg Infect Dis       Date:  2012-05       Impact factor: 6.883

10.  Genome sequence of a novel virus of the species human adenovirus d associated with acute gastroenteritis.

Authors:  Yuki Matsushima; Hideaki Shimizu; Atsuko Kano; Etsuko Nakajima; Yoko Ishimaru; Shuvra Kanti Dey; Yuki Watanabe; Fuyuka Adachi; Kohnosuke Mitani; Tsuguto Fujimoto; Tung Gia Phan; Hiroshi Ushijima
Journal:  Genome Announc       Date:  2013-01-15
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