Literature DB >> 21880825

Live cell imaging of yeast.

Daniel R Rines, Dominik Thomann, Jonas F Dorn, Paul Goodwin, Peter K Sorger.   

Abstract

The development of cloning vectors for green fluorescent protein (GFP) and the simplicity of yeast reverse genetics allow straightforward labeling of yeast proteins in living cells. Budding and fission yeast are therefore attractive organisms in which to study dynamic cellular processes such as growth, cell division, and morphogenesis using live cell fluorescence microscopy. This article focuses on methods to culture, mount, and observe budding yeast cells using three-dimensional (3D) microscopy, but the methods are broadly applicable to other types of cells and other imaging techniques. The emphasis is on 3D imaging, because yeast cells are roughly spherical, and most organelles in yeast move in three dimensions. Three-dimensional imaging also makes it possible to apply image restoration methods (e.g., deconvolution) to obtain sharper images with better definition. This is important, because yeast cells are small (haploid Saccharomyces cerevisiae cells have a diameter of ~4-5 µm) relative to the resolution of even the best optical microscope (~0.25 µm).

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Year:  2011        PMID: 21880825     DOI: 10.1101/pdb.top065482

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  14 in total

1.  A Targeted Mutation Identified through pKa Measurements Indicates a Postrecruitment Role for Fis1 in Yeast Mitochondrial Fission.

Authors:  Marijke Koppenol-Raab; Megan Cleland Harwig; Ammon E Posey; John M Egner; Kevin R MacKenzie; R Blake Hill
Journal:  J Biol Chem       Date:  2016-08-05       Impact factor: 5.157

2.  Fast label-free microscopy technique for 3D dynamic quantitative imaging of living cells.

Authors:  José A Rodrigo; Juan M Soto; Tatiana Alieva
Journal:  Biomed Opt Express       Date:  2017-11-09       Impact factor: 3.732

3.  A series of conditional shuttle vectors for targeted genomic integration in budding yeast.

Authors:  Chia-Ching Chou; Michael T Patel; Marc R Gartenberg
Journal:  FEMS Yeast Res       Date:  2015-03-02       Impact factor: 2.796

4.  The Social Amoeba Dictyostelium discoideum Is Highly Resistant to Polyglutamine Aggregation.

Authors:  Stephanie Santarriaga; Amber Petersen; Kelechi Ndukwe; Anthony Brandt; Nashaat Gerges; Jamie Bruns Scaglione; Kenneth Matthew Scaglione
Journal:  J Biol Chem       Date:  2015-09-01       Impact factor: 5.157

5.  Single-Molecule mRNA Detection in Live Yeast.

Authors:  Tineke L Lenstra; Daniel R Larson
Journal:  Curr Protoc Mol Biol       Date:  2016-01-04

6.  Analysis of Single Locus Trajectories for Extracting In Vivo Chromatin Tethering Interactions.

Authors:  Assaf Amitai; Mathias Toulouze; Karine Dubrana; David Holcman
Journal:  PLoS Comput Biol       Date:  2015-08-28       Impact factor: 4.475

7.  Genome-wide mapping of yeast RNA polymerase II termination.

Authors:  Paul Schaughency; Jonathan Merran; Jeffry L Corden
Journal:  PLoS Genet       Date:  2014-10-09       Impact factor: 5.917

8.  Mechanism of Long-Range Chromosome Motion Triggered by Gene Activation.

Authors:  Anqi Wang; Janhavi A Kolhe; Nate Gioacchini; Imke Baade; William M Brieher; Craig L Peterson; Brian C Freeman
Journal:  Dev Cell       Date:  2020-01-02       Impact factor: 12.270

9.  Target of rapamycin signaling regulates high mobility group protein association to chromatin, which functions to suppress necrotic cell death.

Authors:  Hongfeng Chen; Jason J Workman; Alexa Tenga; R Nicholas Laribee
Journal:  Epigenetics Chromatin       Date:  2013-09-02       Impact factor: 4.954

10.  Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment.

Authors:  Kristian Shulist; Eric Yen; Susanne Kaitna; Allen Leary; Alexandra Decterov; Debarun Gupta; Jackie Vogel
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

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