Literature DB >> 2187534

5-[[(carboxymethyl)amino]methyl]uridine is found in the anticodon of yeast mitochondrial tRNAs recognizing two-codon families ending in a purine.

R P Martin1, A P Sibler, C W Gehrke, K Kuo, C G Edmonds, J A McCloskey, G Dirheimer.   

Abstract

The modified nucleoside (U*) present in the wobble position of Saccharomyces cerevisiae mitochondrial tRNA(Leu) and tRNA(Trp) was isolated by thin-layer chromatography and HPLC. Its chromatographic, UV spectral, and mass spectrometric properties were shown to be identical with those of 5- [[(carboxymethyl)amino]methyl]uridine (cmnm5U). This nucleoside found in yeast mitochondrial tRNAs reading two-codon families ending in a purine permits the selective recognition of A and G in the third codon position.

Entities:  

Mesh：

Substances：

Year:  1990        PMID： 2187534     DOI： 10.1021/bi00456a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN： 0006-2960            Impact factor:   3.162


  12 in total

Review 1.  Recent evidence for evolution of the genetic code.

Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

2.  An extensive study of mutation and selection on the wobble nucleotide in tRNA anticodons in fungal mitochondrial genomes.

Authors:  Malisa Carullo; Xuhua Xia
Journal:  J Mol Evol       Date:  2008-04-10       Impact factor: 2.395

3.  Taurine-containing uridine modifications in tRNA anticodons are required to decipher non-universal genetic codes in ascidian mitochondria.

Authors:  Takeo Suzuki; Kenjyo Miyauchi; Tsutomu Suzuki; Shin-ichi Yokobori; Naoki Shigi; Akiko Kondow; Nono Takeuchi; Akihiko Yamagishi; Kimitsuna Watanabe
Journal:  J Biol Chem       Date:  2011-08-26       Impact factor: 5.157

4.  Decoding mechanism of non-universal genetic codes in Loligo bleekeri mitochondria.

Authors:  Takayuki Ohira; Takeo Suzuki; Kenjyo Miyauchi; Tsutomu Suzuki; Shin-ichi Yokobori; Akihiko Yamagishi; Kimitsuna Watanabe
Journal:  J Biol Chem       Date:  2013-01-28       Impact factor: 5.157

Review 5.  Protein synthesis in mitochondria.

Authors:  H J Pel; L A Grivell
Journal:  Mol Biol Rep       Date:  1994-05       Impact factor: 2.316

6.  Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster.

Authors:  Gye Won Han; Xiang Lei Yang; Daniel McMullan; Yeeting E Chong; S Sri Krishna; Christopher L Rife; Dana Weekes; Scott M Brittain; Polat Abdubek; Eileen Ambing; Tamara Astakhova; Herbert L Axelrod; Dennis Carlton; Jonathan Caruthers; Hsiu Ju Chiu; Thomas Clayton; Lian Duan; Julie Feuerhelm; Joanna C Grant; Slawomir K Grzechnik; Lukasz Jaroszewski; Kevin K Jin; Heath E Klock; Mark W Knuth; Abhinav Kumar; David Marciano; Mitchell D Miller; Andrew T Morse; Edward Nigoghossian; Linda Okach; Jessica Paulsen; Ron Reyes; Henry van den Bedem; Aprilfawn White; Guenter Wolf; Qingping Xu; Keith O Hodgson; John Wooley; Ashley M Deacon; Adam Godzik; Scott A Lesley; Marc André Elsliger; Paul Schimmel; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-09-23

7.  The yeast nuclear gene MRF1 encodes a mitochondrial peptide chain release factor and cures several mitochondrial RNA splicing defects.

Authors:  H J Pel; C Maat; M Rep; L A Grivell
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

8.  tRNA Modification and Genetic Code Variations in Animal Mitochondria.

Authors:  Kimitsuna Watanabe; Shin-Ichi Yokobori
Journal:  J Nucleic Acids       Date:  2011-10-09

9.  Conflict between translation initiation and elongation in vertebrate mitochondrial genomes.

Authors:  Xuhua Xia; Huang Huang; Malisa Carullo; Esther Betrán; Etsuko N Moriyama
Journal:  PLoS One       Date:  2007-02-21       Impact factor: 3.240

10.  The cost of wobble translation in fungal mitochondrial genomes: integration of two traditional hypotheses.

Authors:  Xuhua Xia
Journal:  BMC Evol Biol       Date:  2008-07-19       Impact factor: 3.260
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.