Literature DB >> 2187474

Crystallization of alcohol oxidase from Pichia pastoris. Secondary structure predictions indicate a domain with the eightfold beta/alpha-barrel fold.

E Tykarska1, L Lebioda, E Marchut, J Steczko, B Stec.   

Abstract

Alcohol oxidase from Pichia pastoris has been crystallized from polyethylene glycol 4000 solutions. The crystals are tetragonal, a = 228 A, c = 456 A space group P4(1)2(1)2. The crystals scatter only to about 6 A resolution; their poor crystallinity may have some physiological function. Secondary structure predictions suggest that the C-terminal part of the molecule, residues 311-664, has the folding of an eightfold beta/alpha-barrel (TIM barrel). This would indicate common ancestry with four other flavoenzymes: canavalin, glycolate oxidase, flavocytochrome b, and trimethylamine dehydrogenase.

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Year:  1990        PMID: 2187474     DOI: 10.1007/bf01024988

Source DB:  PubMed          Journal:  J Protein Chem        ISSN: 0277-8033


  12 in total

1.  The active site of spinach glycolate oxidase.

Authors:  Y Lindqvist; C I Brändén
Journal:  J Biol Chem       Date:  1989-02-25       Impact factor: 5.157

2.  Use of electron microscopy in the examination of lattice defects in crystals of alcohol oxidase.

Authors:  I J Van der Klei; C L Lawson; H Rozeboom; B W Dijkstra; M Veenhuis; W Harder; W G Hol
Journal:  FEBS Lett       Date:  1989-02-13       Impact factor: 4.124

3.  Three-dimensional structure of the iron-sulfur flavoprotein trimethylamine dehydrogenase at 2.4-A resolution.

Authors:  L W Lim; N Shamala; F S Mathews; D J Steenkamp; R Hamlin; N H Xuong
Journal:  J Biol Chem       Date:  1986-11-15       Impact factor: 5.157

Review 4.  Prediction of the secondary structure of proteins from their amino acid sequence.

Authors:  P Y Chou; G D Fasman
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1978

5.  Crystal structure of enolase indicates that enolase and pyruvate kinase evolved from a common ancestor.

Authors:  L Lebioda; B Stec
Journal:  Nature       Date:  1988-06-16       Impact factor: 49.962

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase.

Authors:  I P Crawford; T Niermann; K Kirschner
Journal:  Proteins       Date:  1987

8.  Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins.

Authors:  J Garnier; D J Osguthorpe; B Robson
Journal:  J Mol Biol       Date:  1978-03-25       Impact factor: 5.469

9.  Molecular cloning and characterization of a gene coding for methanol oxidase in Hansenula polymorpha.

Authors:  A M Ledeboer; L Edens; J Maat; C Visser; J W Bos; C T Verrips; Z Janowicz; M Eckart; R Roggenkamp; C P Hollenberg
Journal:  Nucleic Acids Res       Date:  1985-05-10       Impact factor: 16.971

10.  Isolation of alcohol oxidase and two other methanol regulatable genes from the yeast Pichia pastoris.

Authors:  S B Ellis; P F Brust; P J Koutz; A F Waters; M M Harpold; T R Gingeras
Journal:  Mol Cell Biol       Date:  1985-05       Impact factor: 4.272

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  4 in total

1.  Architecture of peroxisomal alcohol oxidase crystals from the methylotrophic yeast Hansenula polymorpha as deduced by electron microscopy.

Authors:  J Vonck; E F van Bruggen
Journal:  J Bacteriol       Date:  1992-08       Impact factor: 3.490

2.  Flavin-dependent alcohol oxidase from the yeast Pichia pinus. Spatial localization of the coenzyme FAD in the protein structure: hot-tritium bombardment and ESR experiments.

Authors:  A Z Averbakh; N D Pekel; V I Seredenko; A V Kulikov; R I Gvozdev; I P Rudakova
Journal:  Biochem J       Date:  1995-09-01       Impact factor: 3.857

3.  Crystal Structure of Alcohol Oxidase from Pichia pastoris.

Authors:  Christian Koch; Piotr Neumann; Oliver Valerius; Ivo Feussner; Ralf Ficner
Journal:  PLoS One       Date:  2016-02-23       Impact factor: 3.240

4.  Structure of Alcohol Oxidase from Pichia pastoris by Cryo-Electron Microscopy.

Authors:  Janet Vonck; David N Parcej; Deryck J Mills
Journal:  PLoS One       Date:  2016-07-26       Impact factor: 3.240

  4 in total

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