Literature DB >> 21874501

Analysis of freshly fixed and museum invertebrate specimens using high-resolution, high-throughput MRI.

Alexander Ziegler1, Susanne Mueller.   

Abstract

Magnetic resonance imaging (MRI) is now considered a routine tool for comparative morphological imaging in small vertebrate model organisms. However, the application of high-resolution imaging protocols to visualize the anatomy of invertebrate organisms has not yet become a generally accepted tool among zoologists. Here, we describe MRI protocols that permit visualization of both the internal and the external anatomy of freshly fixed invertebrates and specimens from museum collections. The choice of protocols has been optimized to allow the assembly of the large numbers of datasets that are necessary for comparative morphological analyses. Although the primary focus of our work is on sea urchin internal anatomy, we also present results from a variety of other invertebrate taxa to demonstrate the principal feasibility of MRI studies to obtain anatomical information at high resolutions. Furthermore, we briefly describe procedures suitable for 3D modelling.

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Year:  2011        PMID: 21874501     DOI: 10.1007/978-1-61779-219-9_32

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Form and function of the teleost lateral line revealed using three-dimensional imaging and computational fluid dynamics.

Authors:  Hendrik Herzog; Birgit Klein; Alexander Ziegler
Journal:  J R Soc Interface       Date:  2017-05       Impact factor: 4.118

2.  The Digital Fish Library: using MRI to digitize, database, and document the morphological diversity of fish.

Authors:  Rachel M Berquist; Kristen M Gledhill; Matthew W Peterson; Allyson H Doan; Gregory T Baxter; Kara E Yopak; Ning Kang; H J Walker; Philip A Hastings; Lawrence R Frank
Journal:  PLoS One       Date:  2012-04-06       Impact factor: 3.240

3.  Origin and evolutionary plasticity of the gastric caecum in sea urchins (Echinodermata: Echinoidea).

Authors:  Alexander Ziegler; Rich Mooi; Gauthier Rolet; Chantal De Ridder
Journal:  BMC Evol Biol       Date:  2010-10-18       Impact factor: 3.260

4.  Opportunities and challenges for digital morphology.

Authors:  Alexander Ziegler; Malte Ogurreck; Thomas Steinke; Felix Beckmann; Steffen Prohaska; Andreas Ziegler
Journal:  Biol Direct       Date:  2010-07-06       Impact factor: 4.540

5.  Evolution of a novel muscle design in sea urchins (Echinodermata: Echinoidea).

Authors:  Alexander Ziegler; Leif Schröder; Malte Ogurreck; Cornelius Faber; Thomas Stach
Journal:  PLoS One       Date:  2012-05-18       Impact factor: 3.240

6.  A dataset comprising 141 magnetic resonance imaging scans of 98 extant sea urchin species.

Authors:  Alexander Ziegler; Cornelius Faber; Susanne Mueller; Nina Nagelmann; Leif Schröder
Journal:  Gigascience       Date:  2014-10-14       Impact factor: 6.524

7.  Holistic description of new deep sea megafauna (Cephalopoda: Cirrata) using a minimally invasive approach.

Authors:  Alexander Ziegler; Christina Sagorny
Journal:  BMC Biol       Date:  2021-04-23       Impact factor: 7.431

8.  A combined post-mortem magnetic resonance imaging and quantitative histological study of multiple sclerosis pathology.

Authors:  James Kolasinski; Charlotte J Stagg; Steven A Chance; Gabriele C Deluca; Margaret M Esiri; Eun-Hyuk Chang; Jacqueline A Palace; Jennifer A McNab; Mark Jenkinson; Karla L Miller; Heidi Johansen-Berg
Journal:  Brain       Date:  2012-10       Impact factor: 13.501

9.  Schizasterid Heart Urchins Host Microorganisms in a Digestive Symbiosis of Mesozoic Origin.

Authors:  Alexander Ziegler; Ariel M Gilligan; Jesse G Dillon; Bruno Pernet
Journal:  Front Microbiol       Date:  2020-07-22       Impact factor: 5.640

  9 in total

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