Literature DB >> 21868804

Draft genome sequence of Shewanella sp. strain HN-41, which produces arsenic-sulfide nanotubes.

Dong-Hun Kim1, Shenghua Jiang, Ji-Hoon Lee, Yong-Joon Cho, Jongsik Chun, Sang-Haeng Choi, Hong-Seog Park, Hor-Gil Hur.   

Abstract

The dissimilatory metal reducing bacterium Shewanella sp. strain HN-41 was first reported to produce novel photoactive As-S nanotubes via reduction of As(V) and S(2)O(3)(2-) under anaerobic conditions. Here we report the draft genome sequence and annotation of strain HN-41.
Copyright © 2011, American Society for Microbiology. All Rights Reserved.

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Year:  2011        PMID： 21868804      PMCID： PMC3165682          DOI： 10.1128/JB.05578-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

1.  The KEGG resource for deciphering the genome.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Yasushi Okuno; Masahiro Hattori
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  Growth mechanism of amorphous selenium nanoparticles synthesized by Shewanella sp. HN-41.

Authors:  Kawai Tam; Cuong Tu Ho; Ji-Hoon Lee; Min Lai; Chong Hyun Chang; Youngwoo Rheem; Wilfred Chen; Hor-Gil Hur; Nosang V Myung
Journal:  Biosci Biotechnol Biochem       Date:  2010-04-07       Impact factor: 2.043

3.  Effects of temperature and dissolved oxygen on Se(IV) removal and Se(0) precipitation by Shewanella sp. HN-41.

Authors:  Ji-Hoon Lee; Jaehong Han; Heechul Choi; Hor-Gil Hur
Journal:  Chemosphere       Date:  2007-04-16       Impact factor: 7.086

4.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Authors:  R D Fleischmann; M D Adams; O White; R A Clayton; E F Kirkness; A R Kerlavage; C J Bult; J F Tomb; B A Dougherty; J M Merrick
Journal:  Science       Date:  1995-07-28       Impact factor: 47.728

5.  The ArsR repressor mediates arsenite-dependent regulation of arsenate respiration and detoxification operons of Shewanella sp. strain ANA-3.

Authors:  Julie N Murphy; Chad W Saltikov
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

6.  Biogenic formation of As-S nanotubes by diverse Shewanella strains.

Authors:  Shenghua Jiang; Ji-Hoon Lee; Min-Gyu Kim; Nosang V Myung; James K Fredrickson; Michael J Sadowsky; Hor-Gil Hur
Journal:  Appl Environ Microbiol       Date:  2009-08-28       Impact factor: 4.792

7.  Biogenic formation of photoactive arsenic-sulfide nanotubes by Shewanella sp. strain HN-41.

Authors:  Ji-Hoon Lee; Min-Gyu Kim; Bongyoung Yoo; Nosang V Myung; Jongsun Maeng; Takhee Lee; Alice C Dohnalkova; James K Fredrickson; Michael J Sadowsky; Hor-Gil Hur
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-07       Impact factor: 11.205

Review 8.  Towards environmental systems biology of Shewanella.

Authors:  James K Fredrickson; Margaret F Romine; Alexander S Beliaev; Jennifer M Auchtung; Michael E Driscoll; Timothy S Gardner; Kenneth H Nealson; Andrei L Osterman; Grigoriy Pinchuk; Jennifer L Reed; Dmitry A Rodionov; Jorge L M Rodrigues; Daad A Saffarini; Margrethe H Serres; Alfred M Spormann; Igor B Zhulin; James M Tiedje
Journal:  Nat Rev Microbiol       Date:  2008-07-07       Impact factor: 60.633

9.  Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.

Authors:  John F Heidelberg; Ian T Paulsen; Karen E Nelson; Eric J Gaidos; William C Nelson; Timothy D Read; Jonathan A Eisen; Rekha Seshadri; Naomi Ward; Barbara Methe; Rebecca A Clayton; Terry Meyer; Alexandre Tsapin; James Scott; Maureen Beanan; Lauren Brinkac; Sean Daugherty; Robert T DeBoy; Robert J Dodson; A Scott Durkin; Daniel H Haft; James F Kolonay; Ramana Madupu; Jeremy D Peterson; Lowell A Umayam; Owen White; Alex M Wolf; Jessica Vamathevan; Janice Weidman; Marjorie Impraim; Kathy Lee; Kristy Berry; Chris Lee; Jacob Mueller; Hoda Khouri; John Gill; Terry R Utterback; Lisa A McDonald; Tamara V Feldblyum; Hamilton O Smith; J Craig Venter; Kenneth H Nealson; Claire M Fraser
Journal:  Nat Biotechnol       Date:  2002-10-07       Impact factor: 54.908

10.  The COG database: an updated version includes eukaryotes.

Authors:  Roman L Tatusov; Natalie D Fedorova; John D Jackson; Aviva R Jacobs; Boris Kiryutin; Eugene V Koonin; Dmitri M Krylov; Raja Mazumder; Sergei L Mekhedov; Anastasia N Nikolskaya; B Sridhar Rao; Sergei Smirnov; Alexander V Sverdlov; Sona Vasudevan; Yuri I Wolf; Jodie J Yin; Darren A Natale
Journal:  BMC Bioinformatics       Date:  2003-09-11       Impact factor: 3.169
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