Literature DB >> 2186812

Allosteric effects acting over a distance of 20-25 A in the Escherichia coli tryptophan synthase bienzyme complex increase ligand affinity and cause redistribution of covalent intermediates.

K F Houben1, M F Dunn.   

Abstract

The reactions of L-histidine (L-His) and L-tryptophan (L-Trp) with the alpha 2 beta 2 complex of Escherichia coli tryptophan synthase are introduced as probes both of beta-subunit catalysis and of ligand-mediated alpha-beta allosteric interactions. Binding of DL-alpha-glycerol 3-phosphate (GP), an analogue of 3-indole-D-glycerol 3'-phosphate (IGP), to the alpha-catalytic site increases the affinity of alpha 2 beta 2 for L-His 4.5-fold and the affinity for L-Trp 17-fold and brings about a redistribution of beta-bound intermediates that favors the quinonoids derived from each amino acid. Inorganic phosphate (Pi) (presumably via binding to the alpha-catalytic site) influences the distribution of L-His intermediates as does GP. Previous binding studies [Heyn, M. P., & Weischet, W. O. (1975) Biochemistry 14, 2962-2968] indicate that when the phosphoryl group subsite of the alpha-catalytic site is occupied by GP or Pi, a high-affinity indole subsite is induced at the alpha-catalytic site. Interaction of benzimidazole (BZ), an analogue of indole, with this site also shifts the distribution of beta-bound L-His intermediates in favor of the L-His quinonoid. In the absence of Pi or GP, BZ interacts primarily at the beta-catalytic site and competes with L-His for the beta-subunit indole subsite. Since L-His and GP (or Pi) are substrate analogues and L-Trp is the physiological product, these allosteric effects likely take place with the natural substrates.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1990        PMID: 2186812     DOI: 10.1021/bi00461a028

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

Review 1.  Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex.

Authors:  Michael F Dunn
Journal:  Arch Biochem Biophys       Date:  2012-02-02       Impact factor: 4.013

2.  Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states.

Authors:  Dimitri Niks; Eduardo Hilario; Adam Dierkers; Huu Ngo; Dan Borchardt; Thomas J Neubauer; Li Fan; Leonard J Mueller; Michael F Dunn
Journal:  Biochemistry       Date:  2013-09-06       Impact factor: 3.162

3.  Tryptophan synthase: structure and function of the monovalent cation site.

Authors:  Adam T Dierkers; Dimitri Niks; Ilme Schlichting; Michael F Dunn
Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

4.  Severing of a hydrogen bond disrupts amino acid networks in the catalytically active state of the alpha subunit of tryptophan synthase.

Authors:  Jennifer M Axe; Kathleen F O'Rourke; Nicole E Kerstetter; Eric M Yezdimer; Yan M Chan; Alexander Chasin; David D Boehr
Journal:  Protein Sci       Date:  2014-12-11       Impact factor: 6.725

5.  Switches of hydrogen bonds during ligand-protein association processes determine binding kinetics.

Authors:  Yu-ming M Huang; Myungshim Kang; Chia-en A Chang
Journal:  J Mol Recognit       Date:  2014-09       Impact factor: 2.137

6.  Protonation states and catalysis: Molecular dynamics studies of intermediates in tryptophan synthase.

Authors:  Yu-Ming M Huang; Wanli You; Bethany G Caulkins; Michael F Dunn; Leonard J Mueller; Chia-En A Chang
Journal:  Protein Sci       Date:  2015-09-22       Impact factor: 6.725

7.  Mutation of βGln114 to Ala Alters the Stabilities of Allosteric States in Tryptophan Synthase Catalysis.

Authors:  Rittik K Ghosh; Eduardo Hilario; Viktoriia Liu; Yangyang Wang; Dimitri Niks; Jacob B Holmes; Varun V Sakhrani; Leonard J Mueller; Michael F Dunn
Journal:  Biochemistry       Date:  2021-10-01       Impact factor: 3.321

8.  The stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Authors:  Máire E Níbeilliú; J Paul G Malthouse
Journal:  Biochem J       Date:  2004-08-01       Impact factor: 3.857

9.  The effect of different amino acid side chains on the stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Authors:  J J Milne; J P Malthouse
Journal:  Biochem J       Date:  1996-03-15       Impact factor: 3.857

10.  Factors affecting the stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the pro-2R and pro-2S protons of glycine.

Authors:  J J Milne; J P Malthouse
Journal:  Biochem J       Date:  1995-11-01       Impact factor: 3.857

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