Literature DB >> 21865501

A set of microsatellite primers for Zostera japonica (Zosteraceae).

Kai Jiang1, Hui Gao, Na-Na Xu, Eric Po Keung Tsang, Xiao-Yong Chen.   

Abstract

PREMISE OF THE STUDY: Polymorphic microsatellite primers were developed in the seagrass Zostera japonica to investigate genetic variation and to identify clonal structure. • METHODS AND
RESULTS: Thirteen polymorphic loci and 23 monomorphic loci were developed in Z. japonica. Two to 13 alleles per locus were observed at the polymorphic loci across 57 individuals of two Z. japonica populations. The observed and expected heterozygosities within populations ranged from 0.0000 to 1.0000 and from 0.0000 to 0.8542, respectively. •
CONCLUSIONS: Our study showed high-level polymorphism at the polymorphic loci in Z. japonica. These primers would be a powerful tool to study genetic variation, clonal structure, and mating systems.

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Year:  2011        PMID: 21865501     DOI: 10.3732/ajb.1100296

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  5 in total

Review 1.  The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses.

Authors:  Peter A Davey; Mathieu Pernice; Gaurav Sablok; Anthony Larkum; Huey Tyng Lee; Agnieszka Golicz; David Edwards; Rudy Dolferus; Peter Ralph
Journal:  Funct Integr Genomics       Date:  2016-07-21       Impact factor: 3.410

2.  Development of microsatellite markers for the seagrass Zostera japonica using next-generation sequencing.

Authors:  Xiaomei Zhang; Yi Zhou; Yu-Long Li; Jin-Xian Liu
Journal:  Mol Biol Rep       Date:  2018-11-17       Impact factor: 2.316

3.  Development of microsatellite loci for the endangered seagrass Zostera japonica (Zosteraceae).

Authors:  Xiaomei Zhang; Yi Zhou; Dongxiu Xue; Jin-Xian Liu
Journal:  Appl Plant Sci       Date:  2015-09-01       Impact factor: 1.936

4.  A new set of microsatellite primers for Coelogyne fimbriata (Orchidaceae) and cross-amplification in C. ovalis.

Authors:  Wei-Chang Huang; Kai Jiang; Chao Hu; Yue-E Xiao; Barnabas C Seyler; Yuan-Yuan Li
Journal:  Appl Plant Sci       Date:  2017-05-08       Impact factor: 1.936

5.  Rare sex or out of reach equilibrium? The dynamics of F IS in partially clonal organisms.

Authors:  Katja Reichel; Jean-Pierre Masson; Florent Malrieu; Sophie Arnaud-Haond; Solenn Stoeckel
Journal:  BMC Genet       Date:  2016-06-10       Impact factor: 2.797

  5 in total

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