Literature DB >> 21861584

Vibrational spectroscopy of water in hydrated lipid multi-bilayers. I. Infrared spectra and ultrafast pump-probe observables.

S M Gruenbaum1, J L Skinner.   

Abstract

The vibrational spectroscopy of hydration water in dilauroylphosphatidylcholine lipid multi-bilayers is investigated using molecular dynamics simulations and a mixed quantum/classical model for the OD stretch spectroscopy of dilute HDO in H(2)O. FTIR absorption spectra, and isotropic and anisotropic pump-probe decay curves have been measured experimentally as a function of the hydration level of the lipid multi-bilayer, and our goal is to make connection with these experiments. To this end, we use third-order response functions, which allow us to include non-Gaussian frequency fluctuations, non-Condon effects, molecular rotations, and a fluctuating vibrational lifetime, all of which we believe are important for this system. We calculate the response functions using existing transition frequency and dipole maps. From the experiments it appears that there are two distinct vibrational lifetimes corresponding to HDO molecules in different molecular environments. In order to obtain these lifetimes, we consider a simple two-population model for hydration water hydrogen bonds. Assuming a different lifetime for each population, we then calculate the isotropic pump-probe decay, fitting to experiment to obtain the two lifetimes for each hydration level. With these lifetimes in hand, we then calculate FTIR spectra and pump-probe anisotropy decay as a function of hydration. This approach, therefore, permits a consistent calculation of all observables within a unified computational scheme. Our theoretical results are all in qualitative agreement with experiment. The vibrational lifetime of lipid-associated OD groups is found to be systematically shorter than that of the water-associated population, and the lifetimes of each population increase with decreasing hydration, in agreement with previous analysis. Our theoretical FTIR absorption spectra successfully reproduce the experimentally observed red-shift with decreasing lipid hydration, and we confirm a previous interpretation that this shift results from the hydrogen bonding of water to the lipid phosphate group. From the pump-probe anisotropy decay, we confirm that the reorientational motions of water molecules slow significantly as hydration decreases, with water bound in the lipid carbonyl region undergoing the slowest rotations.
© 2011 American Institute of Physics

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21861584      PMCID: PMC3172989          DOI: 10.1063/1.3615717

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  89 in total

1.  Large angular jump mechanism observed for hydrogen bond exchange in aqueous perchlorate solution.

Authors:  Minbiao Ji; Michael Odelius; K J Gaffney
Journal:  Science       Date:  2010-05-21       Impact factor: 47.728

2.  Tracking water's response to structural changes in Nafion membranes.

Authors:  David E Moilanen; Ivan R Piletic; M D Fayer
Journal:  J Phys Chem A       Date:  2006-07-27       Impact factor: 2.781

3.  An extended dynamical hydration shell around proteins.

Authors:  Simon Ebbinghaus; Seung Joong Kim; Matthias Heyden; Xin Yu; Udo Heugen; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

4.  The effects of dissolved halide anions on hydrogen bonding in liquid water.

Authors:  Jared D Smith; Richard J Saykally; Phillip L Geissler
Journal:  J Am Chem Soc       Date:  2007-10-25       Impact factor: 15.419

5.  Studies of phospholipid hydration by high-resolution magic-angle spinning nuclear magnetic resonance.

Authors:  Z Zhou; B G Sayer; D W Hughes; R E Stark; R M Epand
Journal:  Biophys J       Date:  1999-01       Impact factor: 4.033

6.  Dielectric relaxation dynamics of water in model membranes probed by terahertz spectroscopy.

Authors:  K J Tielrooij; D Paparo; L Piatkowski; H J Bakker; M Bonn
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

7.  Dielectric spectroscopy as a sensor of membrane headgroup mobility and hydration.

Authors:  B Klösgen; C Reichle; S Kohlsmann; K D Kramer
Journal:  Biophys J       Date:  1996-12       Impact factor: 4.033

8.  Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute HOD in liquid D2O.

Authors:  B Auer; R Kumar; J R Schmidt; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-18       Impact factor: 11.205

9.  Molecular reorientation of liquid water studied with femtosecond midinfrared spectroscopy.

Authors:  H J Bakker; Y L A Rezus; R L A Timmer
Journal:  J Phys Chem A       Date:  2008-10-28       Impact factor: 2.781

10.  Biomolecular simulations of membranes: physical properties from different force fields.

Authors:  Shirley W I Siu; Robert Vácha; Pavel Jungwirth; Rainer A Böckmann
Journal:  J Chem Phys       Date:  2008-03-28       Impact factor: 3.488

View more
  11 in total

Review 1.  Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction.

Authors:  Carlos R Baiz; Bartosz Błasiak; Jens Bredenbeck; Minhaeng Cho; Jun-Ho Choi; Steven A Corcelli; Arend G Dijkstra; Chi-Jui Feng; Sean Garrett-Roe; Nien-Hui Ge; Magnus W D Hanson-Heine; Jonathan D Hirst; Thomas L C Jansen; Kijeong Kwac; Kevin J Kubarych; Casey H Londergan; Hiroaki Maekawa; Mike Reppert; Shinji Saito; Santanu Roy; James L Skinner; Gerhard Stock; John E Straub; Megan C Thielges; Keisuke Tominaga; Andrei Tokmakoff; Hajime Torii; Lu Wang; Lauren J Webb; Martin T Zanni
Journal:  Chem Rev       Date:  2020-06-29       Impact factor: 60.622

2.  Anomalous surface diffusion of protons on lipid membranes.

Authors:  Maarten G Wolf; Helmut Grubmüller; Gerrit Groenhof
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

3.  Vibrational spectroscopy of water at interfaces.

Authors:  J L Skinner; P A Pieniazek; S M Gruenbaum
Journal:  Acc Chem Res       Date:  2011-10-27       Impact factor: 22.384

4.  Vibrational spectroscopy of water in hydrated lipid multi-bilayers. II. Two-dimensional infrared and peak shift observables within different theoretical approximations.

Authors:  Scott M Gruenbaum; Piotr A Pieniazek; J L Skinner
Journal:  J Chem Phys       Date:  2011-10-28       Impact factor: 3.488

5.  Interfacial dynamics in inverted-headgroup lipid membranes.

Authors:  Euihyun Lee; Xiao You; Carlos R Baiz
Journal:  J Chem Phys       Date:  2022-02-21       Impact factor: 3.488

6.  Structure and dynamics of urea/water mixtures investigated by vibrational spectroscopy and molecular dynamics simulation.

Authors:  J K Carr; L E Buchanan; J R Schmidt; M T Zanni; J L Skinner
Journal:  J Phys Chem B       Date:  2013-07-25       Impact factor: 2.991

Review 7.  Water Dynamics in the Hydration Shells of Biomolecules.

Authors:  Damien Laage; Thomas Elsaesser; James T Hynes
Journal:  Chem Rev       Date:  2017-03-01       Impact factor: 60.622

8.  Coupled diffusion in lipid bilayers upon close approach.

Authors:  Sander Pronk; Erik Lindahl; Peter M Kasson
Journal:  J Am Chem Soc       Date:  2015-01-06       Impact factor: 15.419

9.  Structural Interpretation of the Large Slowdown of Water Dynamics at Stacked Phospholipid Membranes for Decreasing Hydration Level: All-Atom Molecular Dynamics.

Authors:  Carles Calero; H Eugene Stanley; Giancarlo Franzese
Journal:  Materials (Basel)       Date:  2016-04-27       Impact factor: 3.623

10.  Structure and conformational dynamics of DMPC/dicationic surfactant and DMPC/dicationic surfactant/DNA systems.

Authors:  Zuzanna Pietralik; Rafał Krzysztoń; Wojciech Kida; Weronika Andrzejewska; Maciej Kozak
Journal:  Int J Mol Sci       Date:  2013-04-09       Impact factor: 5.923

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.