Literature DB >> 21852935

Taxonomic position of Hormaphis similibetulae Qiao & Zhang, 2004 (Hemiptera, Aphididae): molecular and biological evidences.

Jing Chen1, Li-Yun Jiang, Ge-Xia Qiao.   

Abstract

The taxonomic position of Hormaphis similibetulae Qiao & Zhang, 2004 has been reexamined. The phylogenetic position of Hormaphis similibetulae was inferred by maximum parsimony, maximum likelihood and Bayesian analyses on the basis of partial nuclear elongation factor-1α and mitochondrial tRNA leucine/cytochrome oxidase II sequences. The results showed that this species fell into the clade of Hamamelistes species, occupying a basal position, and was clearly distinct from other Hormaphis species. A closer relationship between Hormaphis similibetulae and Hamamelistes species was also revealed by life cycle analysis. Therefore, we conclude that Hormaphis similibetulae should be transferred to the genus Hamamelistes as Hamamelistes similibetulae (Qiao & Zhang), comb. n.

Entities:  

Keywords:  China; Hamamelistes similibetulae; Hormaphidinae; biological evidence; molecular evidence; new combination

Year:  2011        PMID: 21852935      PMCID: PMC3142686          DOI: 10.3897/zookeys.111.1284

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


Introduction

The aphid tribe Hormaphidini in subfamily Hormaphidinae (Hemiptera: Aphididae) consists of three genera, , and (Remaudière and Remaudière 1997). and are disjunctively distributed in PageBreakEurasia and North America (Guo and Qiao 2005), where they are primarily associated with and secondarily associated with . The taxonomy of these two genera was once in a mess at both the genus and species levels. They are easily confused with one another, and species of the same genus are difficult to distinguish morphologically. This confusion in the taxonomy was due partly to a limitation of diagnostic characteristics and partly to the fact that no combination had been established between different aphid forms on primary and secondary hosts. Distinction of and is based mainly upon alatae, galls and life cycles. However, it is not easy to collect all morphs, and the observation of life cycles takes a long time. Molecular studies have shed light on these issues. Based on the mitochondrial cytochrome oxidase II (COII) gene, Aoki et al. (2001) clarified the Japanese species, established the combination between generations on primary and secondary hosts, and elucidated their life cycles. von Dohlen et al. (2002) estimated the phylogeny of Hormaphidini using partial nuclear elongation factor-1α (EF-1α) and mitochondrial tRNA leucine/cytochrome oxidase II (COII) sequences, the monophyly of both and was retrieved with strong support. Qiao and Zhang (2004) described based on specimens of apterous viviparous females collected from small conical galls on leaves of in China (Tibet); the specimens were closely related to (Mordvilko) but differed from the latter in body color and living habits. In this study, the taxonomic position of was reassessed on the basis of nuclear EF-1α and mitochondrial tRNA/COII sequences. A discussion of life cycles was also included.

Materials and methods

The samples used in this study and the corresponding collection information are listed in Table 1. Eight species of Hormaphidini, covering all the species of and were used as ingroups. Three species of Nipponaphidini were chosen as outgroups because Nipponaphidini is considered the sister group of Hormaphidini based on biological and phylogenetic data (Ghosh 1985, von Dohlen and Moran 2000, Ortiz-Rivas and Martínez-Torres 2010). Voucher specimens were preserved in 75% ethanol and deposited in the National Zoological Museum of China, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
Table 1.

Collection information and GenBank accession numbers for aphid samples used in this study.

SpeciesHostLocalityDateVoucherEF-1×tRNA/COII
Hamamelistes betulinus (Horvath)Betula davuricaJapan: Yamanashi, Masutomi17 Jul. 199898081AF454599*AF328782*
Hamamelis japonicaJapan: Aomori, Temmabayashi7 Aug. 199898132AF454596*AF328775*
Betula platyphyllaJapan: Tokyo, Okutamako20 May 199999121AF454597*AF328780*
Betula platyphyllaJapan: Hokkaido, Sapporo15 Jun. 199999187AF454598*AF328781*
Hamamelistes kagamii (Monzen)Hamamelis japonicaJapan: Yamanashi, Masutomi17 Jul. 199898084AF454600*AF328772*
Betula grossaJapan: Yamanashi, Sanjonoyu20 May 199999118AF454601*AF328779*
Hamamelis japonicaJapan: Saitama, Shomaru Pass8 Jul. 199999209AF454603*AF328773*
Hamamelis japonicaJapan: Saitama, Shomaru Pass8 Jul. 199999220AF454602*AF328774*
Hamamelistes miyabeiHamamelistes miyabei (Matsumura)Hamamelis japonicaJapan: Yamanashi, Masutomi17 Jul. 199898086AF454595*AF328771*
Betula maximowiczianaJapan: Hokkaido, Sapporo5 Sep. 199898151AF454593*AF328776*
Betula maximowiczianaJapan: Gumma, Mt. Akagi25 May 199999146AF454594*AF328777*
Betula maximowiczianaJapan: Hokkaido, Sapporo15 Jun. 199999182AF454592*AF328778*
Hamamelistes spinosus ShimerHamamelis japonicaUSA: Washington, DCMay 199393-23AF454606*AF328783*
Betula nigraUSA: UT, Logan28 May 199999-54AF454607*AF454619*
Betula nigraUSA: WI, Madison28 Jun. 199999-57AF454608*None
Hormaphis betulae (Mordvilko)Betula platyphyllaJapan: Yamanashi, Masutomi17 Jul. 199898078AF454609*None
Hamamelis japonicaJapan: Saitama, Shomaru Pass21 May 199999130AF454610*AF454622*
Betula platyphyllaJapan: Tokyo, Kazahari Pass26 Jul. 199999224AF454611*AF454623*
Betula sp.China: Jilin, Ji’an13 Aug. 200415214DQ493864*JF730745
Hormaphis cornu (Shimer)Hamamelis virginianaUSA: Georgia, Athens8 Jun. 199494-93AF454612*AF454621*
Hormaphis hamamelidis (Fitch)Hamamelis virginianaUSA: Connecticut, Danielson1 Aug. 199898-05AF454613*AF454620*
Hormaphis similibetulae Qiao & ZhangBetula albosinensisChina: Tibet, Gongbo’gyamda5 Jul. 200213549DQ493849*JF730746
Betula albosinensisChina: Tibet, Linzhi6 Aug. 200315318DQ493866*JF730747
Neohormaphis wuyiensis Qiao & JiangQuercus sp.China: Fujian, Mt. Wuyi18 Jul. 200314525DQ493858*JF730748
Nipponaphis distyliicola MonzenQuercus glaucaJapan: Shinkiba, Tokyo16 Apr. 199999008AF454614*AF454626*
Thoracaphis quercifoliae GhoshQuercus sp.China: Fujian, Mt. Wuyi18 Jul. 200314526_2DQ493851*JF730749

* Sequences from GenBank.

Total genomic DNA was extracted from single aphids preserved in 95% or 100% ethanol using a CTAB protocol modified from Doyle and Doyle (1987). Partial leucine tRNA and the cytochrome oxidase II (COII) gene was amplified with primers 2993+ (Stern 1994) and A3772 (Normark 1996). Sequencing reactions were performed using the corresponding PCR primers from both directions with BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, CA, USA) and run on an ABI 3730 automated sequencer (Applied Biosystems). Sequences were assembled by Seqman II (DNAStar, Inc., Madison, WI, USA) and verified for protein coding framePageBreakPageBreak-shifts to avoid pseudogenes (Zhang and Hewitt 1996) using Editseq (DNAStar, Inc.). All sequences were deposited in GenBank under the accession numbers JF730745–JF730749. All EF-1α sequences used in this study were downloaded directly from GenBank (for accession numbers see Table 1), and only exons were used for further analysis. Multiple alignments were done with ClustalX 1.83 (Thompson et al. 1997) and then verified manually. Nucleotide composition and pairwise distances based on Kimura’s two-parameter model (K2P) (Kimura 1980) of the aligned sequences were calculated using MEGA 4.0 (Tamura et al. 2007). Phylogenetic reconstructions were conducted by maximum parsimony (MP), maximum likelihood (ML) and Bayesian analyses for each single gene and a combined dataset. The partition homogeneity test (Farris et al. 1994) based on 100 replicates of a heuristic search algorithm was performed with PAUP*4.0b10 (Swofford 2002) to examine the incongruence between EF-1α and mtDNA. Unweighted MP and ML analyses were carried out using PAUP*. For ML analysis, the best-fit model of nucleotide substitution was selected for each dataset according to the Akaike information criterion (AIC) in Modeltest 3.7 (Posada and Crandall 1998). Heuristic searches were performed with 1000 (MP) or 100 (ML) random-addition sequences and tree-bisection-reconnection (TBR) branch swapping. Bootstrap (BS) analyses were used to assess the relative robustness of branches of the MP (1000 replicates) and the ML (100 replicates) trees (Felsenstein 1985). Bayesian analysis was conducted using MrBayes 3.1.2 (Ronquist and Huelsenbeck 2003) based on the model selected by Modeltest 3.7. In the combined analysis, the mitochondrial and nuclear data were partitioned, and a heterogeneous model was used for each gene partition. The parameters of the model were treated as unknown variables with uniform prior probabilities and were estimated during the analysis. Four Markov chains (three heated and one cold) were run, starting from a random tree and proceeding for one million Markov chain Monte Carlo generations, sampling the chains every 100 generations. Two concurrent runs were conducted to verify the results. The first 2500 trees were discarded as burn-in samples, the remaining trees were used to compute a majority-rule consensus tree with posterior probabilities (PP). Collection information and GenBank accession numbers for aphid samples used in this study. * Sequences from GenBank.

Results and discussion

The final alignments of EF-1α (excluding three introns) and tRNA/COII sequences consisted of 826 and 761 sites, with 131 and 165 parsimony-informative sites, respectively. A single 1- to 2-base-long indel was found in the tRNA. The genetic distance between two distinct samples of was 0 for EF-1α and 0.001 for tRNA/COII. The distances of both genes between and species were much smaller than those between and the other species (EF-1α: average of 0.040 and range of 0.038–0.042 to , average of 0.082 and range of 0.078–0.092 to ; tRNA/COII: average of 0.080 and range of 0.071–0.085 to , average of 0.106 and range of 0.102–0.112 to ). For phylogenetic analyses, the partition homogeneity test found no significant conflict between EF-1α and mtDNA (P=0.05), indicating that information from both genes could be combined. Combined analysis resulted in similar topology to that obtained in single gene analyses and with higher support for most nodes, so only the combined dataset results were presented. MP analysis yielded eight most parsimonious trees with a length of 611 steps (CI=0.705401, RI=0.845626). ML analysis produced one ML tree based on the optimal model GTR+G selected by AIC in Modeltest 3.7. The 50% majority-rule consensus tree inferred from Bayesian analysis is shown in Fig. 1 and resulted in a topology essentially identical to that obtained in ML analysis, but was different from the strict consensus of MP trees in the position of . All ingroup taxa constituted a monophyletic group with respect to these outgroups and formed two clades. Clade I (100% MP BS, 100% ML BS, 1.00 PP) was comprised of , ,and . Clade II (99% MP BS, 99% ML BS, 1.00 PP) consisted of all the species and . Within clade II, two distinct samples of clustered together (100% MP BS, 100% ML BS, 1.00 PP) and were placed as the outermost branch in ML and Bayesian analyses, just as the results based on EF-1α. However, MP analysis revealed the same topology as the mitochondrial analysis: and were sister groups, although the support value was low (53% BS), and together formed the basal lineage within clade II.
Figure 1.

Phylogenetic tree reconstructed from the combined dataset of EF-1α and tRNA/COII sequences. The Bayesian topology and branch lengths are shown. Values above the branches are MP and ML bootstrap percentages, respectively, and Bayesian posterior probabilities are shown below the branches. The broken line indicates inconsistent branch.

Phylogenetic tree reconstructed from the combined dataset of EF-1α and tRNA/COII sequences. The Bayesian topology and branch lengths are shown. Values above the branches are MP and ML bootstrap percentages, respectively, and Bayesian posterior probabilities are shown below the branches. The broken line indicates inconsistent branch. The results of genetic distances and phylogenetic analyses strongly suggested that was more closely related to than to . was distinguished by its unique biology, forming galls on leaves of . Because of the high morphological similarity with (Mordvilko), it was placed under the genus (Qiao and Zhang 2004). However, the distinction of apterae of and from the secondary host is very difficult: both of them are aleyrodiform, dorsoventrally compressed, have body segments fused, short antennae with only 2–4 segments, fore and middle legs without tarsi, and hind legs with rudimentary unsegmented tarsi and lack claws. These reductions appear to be related to the organisms’ sedentary habits on and represent the adaptive convergences selected by their temperate habitat. Although species of both genera migrate between and , their life cycles are quite different and have proven extremely valuable in distinction (Pergande 1901, von Dohlen and Gill 1989, Aoki and Kurosu 1991, von Dohlen and Stoetzel 1991, Aoki et al. 2001). Firstly, have two-year life cycles due to a long gall phase, while complete their life cycles within one year. Secondly, on , induce spiny or coral-like galls on leaf or flower buds, whereas cause conical galls on the leaves. Lastly, inhabit cockscomb-like or blister-like galls on leaves of , but live freely on the leaves, not causing any deformation. In China, there is only one species of , , distributed in Sichuan, Hubei, Anhui, Zhejiang, Jiangxi, Hunan and Guangxi Provinces (Zhang and Lu 1995). According to the absence of primary host at high elevations in the Tibetan Plateau, Qiao and Zhang (2004) inferred that was autoecious on . We agree with their inference, as and were also observed living allPageBreak year round parthenogenetically on in Europe due to lack of primary host (Heie 1980). Although the life cycle of requires further research, it appears to be more similar to that of than to that of .

Conclusion

The phylogenetic position of was inferred by MP, ML and Bayesian analyses on the basis of nuclear EF-1α and mitochondrial tRNA/COII sequences. In all phylogenetic analyses, clustered firmly with and was placed as a basal lineage, clearly differed from other species. Life cycle similarities also indicated that was more closely related to species. We therefore conclude that should be transferred to the genus as (Qiao & Zhang), comb. n.
  9 in total

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Authors:  Carol D von Dohlen; Utako Kurosu; Shigeyuki Aoki
Journal:  Mol Phylogenet Evol       Date:  2002-05       Impact factor: 4.286

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

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Authors:  Benjamín Ortiz-Rivas; David Martínez-Torres
Journal:  Mol Phylogenet Evol       Date:  2009-12-21       Impact factor: 4.286

5.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

6.  Nuclear integrations: challenges for mitochondrial DNA markers.

Authors:  D X Zhang; G M Hewitt
Journal:  Trends Ecol Evol       Date:  1996-06       Impact factor: 17.712

7.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

8.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

9.  A phylogenetic analysis of soldier evolution in the aphid family Hormaphididae.

Authors:  D L Stern
Journal:  Proc Biol Sci       Date:  1994-05-23       Impact factor: 5.349

  9 in total
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