Literature DB >> 21843479

The growth of sickle hemoglobin polymers.

Alexey Aprelev1, Zenghui Liu, Frank A Ferrone.   

Abstract

The measurement of polymer growth is an essential element in characterization of assembly. We have developed a precise method of measuring the growth of sickle hemoglobin polymers by observing the time required for polymers to traverse a photolytically produced channel between a region in which polymers are created and a detection region. The presence of the polymer is functionally detected by observing its ability to create new polymers through the well-established process of heterogeneous nucleation. Using this method, we have determined the rate constants for monomer addition to and release from polymer ends, as well as their temperature dependences. At 25°C we find k(+) = 84 ± 2 mM⁻¹ s⁻¹ and k(-) = 790 ± 80 molecules/s from each end. These numbers are in accord with differential interference contrast measurements, and their ratio gives a solubility measured on individual fibers. The single-fiber solubility agrees with that measured in sedimentation experiments. The concentration dependence of the monomer addition rate is consistent with monomer addition, but not oligomer addition, to growing polymers. The concentration dependence suggests the presence of an activation enthalpy barrier, and the rate of monomer addition is not diffusion-limited. Analysis of the temperature dependence of the monomer addition rate reveals an apparent activation energy of 9.1 ± 0.6 kcal/mol.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21843479      PMCID: PMC3175090          DOI: 10.1016/j.bpj.2011.05.064

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  26 in total

1.  A model for the sickle hemoglobin fiber using both mutation sites.

Authors:  A Roufberg; F A Ferrone
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

2.  Micromechanics of isolated sickle cell hemoglobin fibers: bending moduli and persistence lengths.

Authors:  Jiang Cheng Wang; Matthew S Turner; Gunjan Agarwal; Suzanna Kwong; Robert Josephs; Frank A Ferrone; Robin W Briehl
Journal:  J Mol Biol       Date:  2002-01-25       Impact factor: 5.469

3.  Sickle hemoglobin fibers: mechanisms of depolymerization.

Authors:  Gunjan Agarwal; Jiang Cheng Wang; Suzanna Kwong; Scott M Cohen; Frank A Ferrone; Robert Josephs; Robin W Briehl
Journal:  J Mol Biol       Date:  2002-09-13       Impact factor: 5.469

Review 4.  Crowding and the polymerization of sickle hemoglobin.

Authors:  Frank A Ferrone; Maria A Rotter
Journal:  J Mol Recognit       Date:  2004 Sep-Oct       Impact factor: 2.137

5.  The kinetics of nucleation and growth of sickle cell hemoglobin fibers.

Authors:  Oleg Galkin; Ronald L Nagel; Peter G Vekilov
Journal:  J Mol Biol       Date:  2006-10-05       Impact factor: 5.469

6.  Kinetics and thermodynamics of amyloid formation from direct measurements of fluctuations in fibril mass.

Authors:  Tuomas P J Knowles; Wenmiao Shu; Glyn L Devlin; Sarah Meehan; Stefan Auer; Christopher M Dobson; Mark E Welland
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-31       Impact factor: 11.205

Review 7.  Molecular crowding: analysis of effects of high concentrations of inert cosolutes on biochemical equilibria and rates in terms of volume exclusion.

Authors:  A P Minton
Journal:  Methods Enzymol       Date:  1998       Impact factor: 1.600

8.  Nucleation and growth of fibres and gel formation in sickle cell haemoglobin.

Authors:  R E Samuel; E D Salmon; R W Briehl
Journal:  Nature       Date:  1990-06-28       Impact factor: 49.962

9.  Universal metastability of sickle hemoglobin polymerization.

Authors:  Weijun Weng; Alexey Aprelev; Robin W Briehl; Frank A Ferrone
Journal:  J Mol Biol       Date:  2008-02-05       Impact factor: 5.469

10.  How Can Hydrophobic Association Be Enthalpy Driven?

Authors:  Piotr Setny; Riccardo Baron; J Andrew McCammon
Journal:  J Chem Theory Comput       Date:  2010-08-24       Impact factor: 6.006

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  12 in total

1.  Nucleation of sickle hemoglobin mixed with hemoglobin A: experimental and theoretical studies of hybrid-forming mixtures.

Authors:  Maria Rotter; Donna Yosmanovich; Robin W Briehl; Suzanna Kwong; Frank A Ferrone
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Multifunctional magnetic rotator for micro and nanorheological studies.

Authors:  Alexander Tokarev; Alexey Aprelev; Mikhail N Zakharov; Guzeliya Korneva; Yury Gogotsi; Konstantin G Kornev
Journal:  Rev Sci Instrum       Date:  2012-06       Impact factor: 1.523

3.  Molecular insights into the irreversible mechanical behavior of sickle hemoglobin.

Authors:  Sumith Yesudasan; Simone A Douglas; Manu O Platt; Xianqiao Wang; Rodney D Averett
Journal:  J Biomol Struct Dyn       Date:  2018-05-04

Review 4.  Ratchets, red cells, and metastability.

Authors:  Frank A Ferrone; Alexey Aprelev
Journal:  Biophys Rev       Date:  2013-04-18

5.  Probing the Twisted Structure of Sickle Hemoglobin Fibers via Particle Simulations.

Authors:  Lu Lu; Xuejin Li; Peter G Vekilov; George Em Karniadakis
Journal:  Biophys J       Date:  2016-05-10       Impact factor: 4.033

6.  Mesoscopic Adaptive Resolution Scheme toward Understanding of Interactions between Sickle Cell Fibers.

Authors:  Lu Lu; He Li; Xin Bian; Xuejin Li; George Em Karniadakis
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

7.  Fluorescence Lifetime Measurement of Prefibrillar Sickle Hemoglobin Oligomers as a Platform for Drug Discovery in Sickle Cell Disease.

Authors:  Nagamani Vunnam; Scott Hansen; Dillon C Williams; MaryJane Olivia Been; Chih Hung Lo; Anil K Pandey; Carolyn N Paulson; John A Rohde; David D Thomas; Jonathan N Sachs; David K Wood
Journal:  Biomacromolecules       Date:  2022-08-09       Impact factor: 6.978

8.  An Experimental-Computational Approach to Quantify Blood Rheology in Sickle Cell Disease.

Authors:  Marisa S Bazzi; José M Valdez; Victor H Barocas; David K Wood
Journal:  Biophys J       Date:  2020-10-20       Impact factor: 4.033

9.  Predicting the morphology of sickle red blood cells using coarse-grained models of intracellular aligned hemoglobin polymers.

Authors:  Huan Lei; George Em Karniadakis
Journal:  Soft Matter       Date:  2012-04-28       Impact factor: 3.679

10.  Cooperative Assembly of Hsp70 Subdomain Clusters.

Authors:  Maya A Wright; Francesco A Aprile; Mathias M J Bellaiche; Thomas C T Michaels; Thomas Müller; Paolo Arosio; Michele Vendruscolo; Christopher M Dobson; Tuomas P J Knowles
Journal:  Biochemistry       Date:  2018-05-29       Impact factor: 3.162

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